iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115630

Ensembl Protein ID

ENSSSCP00000013037.3

UniProt Accession

F1RX17; F1RX17_PIG

Genbank Protein ID

ENSSSCP00000013037

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU861899

Gene Name

USP9X

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000012251.3	ENSSSCT00000013397.3	ENSSSCP00000013037.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.10e-85	285.6	815	1213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle................kkkeklneenp............................. 42
           +GlkN g+tCYmNSv+Q+L++ip++r+ +l                 k         +                             
   Q: 815  VGLKNAGATCYMNSVIQQLYMIPSIRNGILAiegtgsdvdddmsgdeK---------Qdnesnvdprddvfgypqqfedkpalskte 892
           6******************************88888877666654331.........033334456677777777777777777777 PP
   S: 43   ..kepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedksels 127
             ke +  +l++lq +f +l  s+ +++ pr ++k+++ + e ++  eq+Da Ef++ l+d+l+e+l                    
   Q: 893  drKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEAL-------------------- 959
           6677777************************************************************.................... PP
   S: 128  deaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkk 214
                 k   ++ ++s++++g++ +q +c+ c ++++ ee+f++l++++++++     +l d+Le+++k + leg+n+y+cekc+kk
   Q: 960  ------KALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQ-----NLLDSLEQYVKGDLLEGANAYHCEKCNKK 1035
           ......67999******************************************.....9**************************** PP
   S: 215  qeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts......................peekqke..... 274
           ++++k+l +kklP+vL ++LkRf ++ e+++ +k+n+++efp+eLd++p+++                       +     +     
   Q: 1036 VDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAgvaklegdnvnqesqlikqneqS-----Dsetag 1117
           *****************************************************88888888777777777655442.....145566 PP
   S: 275  kkkYeLiavvvHsGslssGHYvayvknekgk......WllfdDskVtevkeeevleetg...........................s 328
           ++kY+L++v+vHsG++s+GHY++y+ +++g+      W++fdD  Vte+k+++ +e+++                           +
   Q: 1118 STKYRLVGVLVHSGQASGGHYYSYIIQRNGGdgernrWYKFDDGDVTECKMDDDEEMKNqcfggeymgevfdhmmkrmsyrrqkrwW 1204
           ***************************5444555556*******************9999*************************** PP
   S: 329  taYvlfYkr 337
           +aY+lfY+r
   Q: 1205 NAYILFYER 1213
           *******98 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

XFKAVNCREG KLVAKRRAYM MDDLELIGLD YLWRVVIQSN DDIASRAIDL LKEIYTNLGP 60
RLQVNQVVIH EDFIQSCFDR LKASYDTLCV LDGDKDSINC ARQEAVRMVR VLTVLREYIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTCAAAGC TGTGAATTGT CGAGAAGGAA AGCTAGTAGC AAAAAGGAGA GCATATATGA 60
TGGATGATTT GGAGTTAATA GGATTAGACT ACCTTTGGAG GGTAAGTGAA AAGTAGGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005737--C:cytoplasm
GO:0030426--C:growth cone
GO:0016020--C:membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0048675--P:axon extension
GO:0030509--P:BMP signaling pathway
GO:0001764--P:neuron migration
GO:0016579--P:protein deubiquitination
GO:0007179--P:transforming growth factor beta receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025551	Ciona intestinalis	63.50	1.00e-142	499.00
IUUC-Dor-030352	Dipodomys ordii	93.64	0.00e+00	2237.00
IUUC-Eeu-034907	Erinaceus europaeus	87.26	0.00e+00	1848.00
IUUC-Meu-056849	Macropus eugenii	82.72	0.00e+00	1411.00
IUUC-Opr-070185	Ochotona princeps	87.53	0.00e+00	793.00
IUUC-Sar-113729	Sorex araneus	94.86	0.00e+00	3156.00
IUUC-Tni-120207	Tetraodon nigroviridis	85.38	0.00e+00	2037.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence