iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028126

Ensembl Protein ID

ENSDARP00000139829.1

UniProt Accession

A0A0G2L4Y9; A0A0G2L4Y9_DANRE

Protein Name

Uncharacterized protein

Gene Name

WDR48 (1 of many); LOC100534785

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000102302.1	ENSDART00000160091.1	ENSDARP00000139829.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-11	44.1	26	63
ULD/UDP/UFD/RAWUL	2.30e-23	83.4	387	492
ULD/UBL/SUMO	4.40e-48	162.9	378	485

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHtd v +l +  d t  +sGs Dgti++W+l +++++
   Q: 26   GHTDNVKSLLLnRDgTQCLSGSSDGTIRLWSLGQQRCI 63
           8********88*888*****************999997 PP

ULD/UDP/UFD/RAWUL

   S: 4    sLeplesnkakddsklkkkylrcsarltVkhlkkflaeklkl...sssy..........................evdllcedevLedn 63
            L+p++s++ak+   lkk++l++s++l+V++++++++ek+++   +                             +++llc+d+vL++n
   Q: 387  YLQPHSSSGAKT---LKKDRLSASDMLQVRKVMEHVYEKIINldsE--SqtggsaaekpsseqkedeemavqaeeKIELLCQDQVLDPN 470
           69**********...*************************998762..234666677777778888888999999************** PP
   S: 64   etLeeikyifiwkkegpLvLqYr 86
           ++L+++ ++fiwk++g+L+L+Yr
   Q: 471  MDLRTV-KHFIWKSGGDLTLHYR 492
           ******.***************9 PP

ULD/UBL/SUMO

   S: 1    eskffkapvslkvagqdGsevlfklklsa....qlkklmeavYvkrinldensvrfvfngqkireq.etpeelevededkiellcq... 81
           ++kf+k+p++l++++++G+++l+k++lsa    q++k+me+vY+k+inld +s++  +  +k++ + + +ee++v++e+kiellcq   
   Q: 378  MPKFNKIPFYLQPHSSSGAKTLKKDRLSAsdmlQVRKVMEHVYEKIINLDSESQTGGSAAEKPSSEqKEDEEMAVQAEEKIELLCQdqv 466
           8*******************************************************9776666655055689**************777 PP
   S: 82   ...............ksGG 85
                          ksGG
   Q: 467  ldpnmdlrtvkhfiwKSGG 485
           7777777777777777776 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MYFNLFGQVL RVWDPRTCAK LMKLKGHTDN VKSLLLNRDG TQCLSGSSDG TIRLWSLGQQ 60
RCIATYRVHD EGVWALQVNE AFTHVYSGGR DRKIYCTDLR NPDIRVLICE EKAPVLKMEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTTGTTAG AATGAGTCAG TGAATGTACT TCAATCTTTT TGGTCAGGTT TTAAGAGTGT 60
GGGATCCACG AACCTGTGCC AAACTCATGA AACTGAAGGG ACACACAGAC AACGTCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR021772--DUF3337
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogl-077883	Oryza glaberrima	33.67	8.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence