iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131715

UUCD1 version

UUC-ViV-00901

Ensembl Protein ID

VIT_07s0005g03520.t01

UniProt Accession

F6HZL0; F6HZL0_VITVI

Genbank Protein ID

CCB60125.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596502

Gene Name

VIT_07s0005g03520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0005g03520	VIT_07s0005g03520.t01	VIT_07s0005g03520.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.40e-31	108.2	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM dPv+++sG+ty+rssI+kwl++g   cP+trq+l++ +l+Pn+t+++li++wceen++
   Q: 236  IPSYFRCPLSLELMMDPVIVASGQTYERSSIQKWLDQGLMICPKTRQTLAHANLIPNYTVKALIENWCEENNI 308
           8*********************************************************************976 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDTKSVRCLI NSISRFIHLV SCQTLKPMPI QKDCRNMVGL LKLLKPVLDD VVNCKIPSDE 60
ILFKECEELD MAVNEAREFV ENWCPKMSKI FSVLQSEQLV MKIQSSSLEI CFILCRLLHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAAACAG GTCAGATGGA CACTAAGTCT GTACGATGTC TTATTAACAG CATTTCTCGG 60
TTCATCCATC TGGTTTCATG CCAGACACTG AAACCTATGC CCATTCAAAA GGATTGCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002809	Amborella trichopoda	51.72	0.00e+00	692.00
IUUC-Aly-005439	Arabidopsis lyrata	47.36	4.00e-165	574.00
IUUC-Ath-007270	Arabidopsis thaliana	55.63	0.00e+00	712.00
IUUC-Bol-015931	Brassica oleracea	54.91	0.00e+00	710.00
IUUC-Bra-017191	Brassica rapa	54.79	0.00e+00	693.00
IUUC-Gma-043908	Glycine max	61.43	0.00e+00	902.00
IUUC-Mtr-057770	Medicago truncatula	60.10	0.00e+00	839.00
IUUC-Mac-064726	Musa acuminata	56.73	0.00e+00	784.00
IUUC-Pop-099351	Populus trichocarpa	67.81	0.00e+00	949.00
IUUC-Ppe-101535	Prunus persica	68.44	0.00e+00	918.00
IUUC-Sly-111511	Solanum lycopersicum	61.07	0.00e+00	781.00
IUUC-Stu-112793	Solanum tuberosum	60.76	0.00e+00	815.00
IUUC-Tca-121486	Theobroma cacao	68.40	0.00e+00	1002.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence