iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043973

UUCD1 version

UUC-GlM-02959

Ensembl Protein ID

GLYMA10G01671.1

UniProt Accession

K7LGU8; K7LGU8_SOYBN

Genbank Protein ID

KRH31800.1; KRH31801.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843; CM000843

Gene Name

LOC100784354; GLYMA_10G013500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G01671	GLYMA10G01671.1	GLYMA10G01671.1
GLYMA10G01671	GLYMA10G01671.3	GLYMA10G01671.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-23	82.6	325	358
UBD/Beta-Prp	3.80e-43	149.4	237	502

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gHt+ v+ + f ++    l+s+sdDgt+++WD r
   Q: 325  GHTGAVNTITFsPSviYQLLSSSDDGTCRIWDAR 358
           8**********9665888**************66 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           k+l+gh+ +v +   f  +++++++gs+d+ +k+w ++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+  
   Q: 237  KKLRGHRVAVYC-AIFDGSGRYVISGSDDRLVKIWYMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGA 329
           667777776666.8999*********************************************9******************************* PP
   S: 97   vlslsfspsg.dklvsGshdrtirvwdletgqclee........................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWd 165
           v +++fsps  + l+s s+d t r+wd ++    +                          + +++  v c +++ +g ++v+Gs D+  r+W+
   Q: 330  VNTITFSPSViYQLLSSSDDGTCRIWDARNSHNPRIyvprpldaingksnappaslpsssSNGQQSYQVLCCAYNANGTVFVTGSSDTYARVWS 423
           ********777********************9998899********************9888888899************************** PP
   S: 166  l......ktgkllrtl..tgghtdsvyslsfdsng..........................kelvsgsldgtvklwdlq 210
                   +++ ++++   +gh+++v+ ++f+  +                            +v++s+dg+ ++w  +
   Q: 424  AlkpntdDSEQPIHEMdlLSGHENDVNYVQFSGCSvaskiltsdpwkeentlkfrnfwychDNIVTCSRDGSAIIWVPR 502
           9******99999999999556*********99988999999999999999**************************766 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDSRKGKASV HASSLSVAPL SVSNKVDQMV SPPRHLRAVE TDVDIDLREI YFLIMHFLSV 60
GPCRRTFLNF KEELLEHQLL PRRYHAWFSR SGEPRVDDAD EDDGISLPLD YSNLVGRYPH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCGTTTAG GTTTTCCCTC AATCAATTGA ATTAATCAAT CTCTCTATTG CCATGCACTC 60
GGAAGAACAA AGAGTGACAC TTGTTTTGAT TTTCATTCAA TTTAGATTTA GATTGGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0007010--P:cytoskeleton organization
GO:0008360--P:regulation of cell shape
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002600	Amborella trichopoda	50.39	0.00e+00	1428.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	33.22	2.00e-34	141.00
IUUC-Cin-025702	Ciona intestinalis	35.48	2.00e-29	122.00
IUUC-Csv-025813	Ciona savignyi	26.52	1.00e-53	204.00
IUUC-Dor-030195	Dipodomys ordii	38.92	4.00e-31	131.00
IUUC-Olu-087745	Ostreococcus lucimarinus	33.45	3.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence