iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016858

Ensembl Protein ID

Bra018983.1-P

UniProt Accession

M4DR40; M4DR40_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018983	Bra018983.1	Bra018983.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-27	93.9	268	299
UBD/Beta-Prp	7.60e-43	147.8	28	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gH ++v+c++f ++   + +sGs Dgti++W +
   Q: 268  GHHGPVHCVRFsPTgeSY-ASGSEDGTIRIWQT 299
           899*********554677.************86 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGsh 114
           +pd+ +l+++s+d+   + + +t + + +++gh+++v++ ++++++   +++s D  +k+wd  tg+ +h+++ h++ v++++fs+++++l++G+ 
   Q: 28   TPDGFFLISASKDSHPMLRNGETADWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKRLLTGGF 122
           789999999999999999999*************************9**************************.********************** PP
   S: 115  drtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
            +++rv+dl+      +  ++  g+v+++++  ++  +l s+++ + vrlWd+++gk+++tl+   +++v+s +++++g+++ + ++ +tvk+wd 
   Q: 123  EKILRVFDLNRLDAPPTEVDKSPGSVRTLTWLHSDqTILSSCADIGGVRLWDVRSGKIVQTLET--KSPVTSAEVSQDGRYITT-ADGSTVKFWDA 215
           ***********99999888888889988888777736666666669****************75..************977655.6789******8 PP
   S: 210  qt 211
            +
   Q: 216  NH 217
           76 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDKKKVAVPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET ADWIGTFEGH 60
KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE HKHIVRACAF SEDTKRLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATAAGA AGAAGGTTGC TGTTCCACTT GTTTGCCATG GCCATTCCAG ACCTGTTGTT 60
GATTTGTTCT ATAGTCCCAT AACCCCAGAT GGGTTCTTCC TCATCAGTGC TAGTAAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006421	Arabidopsis lyrata	92.96	0.00e+00	630.00
IUUC-Ath-006574	Arabidopsis thaliana	92.96	0.00e+00	631.00
IUUC-Bol-016209	Brassica oleracea	97.63	0.00e+00	666.00
IUUC-Mtr-058421	Medicago truncatula	80.95	2.00e-158	551.00
IUUC-Olo-080389	Oryza longistaminata	79.76	2.00e-116	411.00
IUUC-Oni-082190	Oryza nivara	81.33	4.00e-158	550.00
IUUC-Opu-084163	Oryza punctata	80.77	1.00e-159	555.00
IUUC-Osa-086010	Oryza sativa	80.35	5.00e-160	556.00
IUUC-Ppa-095206	Physcomitrella patens	68.70	3.00e-134	470.00
IUUC-Ppe-102035	Prunus persica	82.75	2.00e-155	541.00
IUUC-Sit-110760	Setaria italica	82.83	6.00e-163	566.00
IUUC-Sbi-113932	Sorghum bicolor	84.08	6.00e-164	569.00
IUUC-Tca-121759	Theobroma cacao	80.87	5.00e-160	556.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence