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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Cel-018214
Ensembl Protein ID C33H5.6
UniProt Accession Q18404; Q18404_CAEEL
Genbank Protein ID CCD66586.1
Protein Name Set1 WD40 repeat protein homolog
Genbank Nucleotide ID BX284604
Gene Name swd-2.1; C33H5.6; CELE_C33H5.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00016373 C33H5.6 C33H5.6
Annotation
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.70e-12 46.0 255 279
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d.tllvsGsdDgtikvWDlrtgvll 36
    d +++ +Gs D +++++++ tg ++
   Q: 255 DsGFVMVGSADRNVYIYSTETGGVT 279
    5578899************999876 PP
   

Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MYNDEELITV QPEAFKALTP SKKFNETSNK LLDLAYSDDG NNLIVSAEDV VLVYDLRDGS 60
KGKSIECKKY GVNCLEYLDT VKCVHSGPND TTIRLLHLQK KSYVRYFDGH RMPVNFIRTN 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cel-018214|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGATGTACAA TGATGAAGAG CTTATAACAG TTCAACCAGA AGCTTTTAAA GCATTAACAC 60
CTTCGAAGGT AAAATTCGAC GAAAAAAAGT TTATATGTTA ATAAATTTCT TCAGAAATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cel-018214|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation

KEGG cel:CELE_C33H5.6
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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