iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007259

UUCD1 version

UUC-ArT-01647

Ensembl Protein ID

AT1G53023.1

UniProt Accession

F4HPP7; Q9C917; UBC39_ARATH

Genbank Protein ID

AAG52279.1; AEE32877.1

Protein Name

Putative ubiquitin-conjugating enzyme E2 39; E2 ubiquitin-conjugating enzyme 39; Ubiquitin carrier protein 39

Genbank Nucleotide ID

AC019018; CP002684

Gene Name

UBC39; At1g53023; F14G24.31; F8L10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G53023	AT1G53023.1	AT1G53023.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.00e-28	98.5	62	192

Active Site

Position(s)	Description	Evidence
143	Glycyl thioester intermediate	{ECO:0000255\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk.....eeekW 92
           ++ke k l+k+ pe+i+++  ++  ++ ++++i+G e+tpY++g+F ++i+fp++YP+ PPkv++ +   + +Pn+y+ GkvCls++      ++ekW
   Q: 62   IQKEWKILDKNLPETIFVRACES-RIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGglRINPNLYKCGKVCLSLIStwtgkKREKW 158
           799********************.5******************************************9999****************55666699*** PP
   S: 93   sp.alsvesvllsiqsll..aepnpesplneeaa 123
            p  +++ + l+siq+l+  ++p++++p +e+++
   Q: 159  LPkESTMLQLLVSIQALIlnEKPYYNEPGYEKSM 192
           **7789***********99778******999876 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.

Protein Sequence
(Fasta)

MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK 60
DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP YHDGLFFFDI QFPDTYPSVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGAGA TAAAGGTTCG ATTTTTCTCT TTTTCTTTTT GTTCTGTAAT TTCAGTGGGG 60
TTTTGGAGGA GATTAATATG TAACAATTTT GGGGTTTTGT ATTGATTTAG GGTTTACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

ath:AT1G53023

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Tre-121946	Trichoderma reesei	37.69	3.00e-16	79.00
IUUC-Tbe-127630	Tupaia belangeri	48.75	4.00e-11	65.90

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence