iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000009722.6	ENSGALT00000015824.5	ENSGALP00000015808.4
ENSGALG00000009722.6	ENSGALT00000064994.1	ENSGALP00000043572.1
ENSGALG00000009722.6	ENSGALT00000056996.1	ENSGALP00000050465.1
ENSGALG00000009722.6	ENSGALT00000068135.1	ENSGALP00000043950.1
ENSGALG00000009722.6	ENSGALT00000088230.1	ENSGALP00000064468.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-13	49.0	323	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           ++sv +++f    + +l+v G++ g+i +WD r+++
   Q: 323  QSSVMSVCFarfhP-NLVVGGTYSGQIVLWDNRSHR 357
           57899999999754.9999999*********98875 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKEADLQ QKKEPAQEDS DLDRKRRETE 60
ALLQSIGISP EPPLVPTPMS PSSKSVSTPS DAGSQDSGDL GPIGRTLQWD TDPSVLQLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAATCAAA ATGTCGGACA AAAGTGATTT AAAAGCAGAA CTTGAGCGCA AAAAGCAGCG 60
CTTGGCTCAG ATAAGAGAAG AAAAGAAACG GAAGGAAGAA GAAAGGAAGA AGAAAGAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0036464--C:cytoplasmic ribonucleoprotein granule
GO:0000776--C:kinetochore
GO:0005634--C:nucleus
GO:0055037--C:recycling endosome
GO:0000922--C:spindle pole
GO:0047496--P:vesicle transport along microtubule

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	93.33	0.00e+00	1172.00
IUUC-Aca-004659	Anolis carolinensis	95.06	0.00e+00	1156.00
IUUC-Ang-009680	Aspergillus niger	41.42	3.00e-91	329.00
IUUC-Ame-010879	Astyanax mexicanus	83.36	0.00e+00	1047.00
IUUC-Bta-013557	Bos taurus	93.15	0.00e+00	1127.00
IUUC-Cja-018913	Callithrix jacchus	93.03	0.00e+00	1171.00
IUUC-Cfa-020794	Canis familiaris	96.34	0.00e+00	1182.00
IUUC-Csa-023506	Chlorocebus sabaeus	96.02	0.00e+00	1180.00
IUUC-Cho-025102	Choloepus hoffmanni	79.53	0.00e+00	949.00
IUUC-Csv-025876	Ciona savignyi	46.94	2.00e-174	605.00
IUUC-Dre-028093	Danio rerio	78.98	0.00e+00	972.00
IUUC-Dor-030613	Dipodomys ordii	92.41	0.00e+00	1160.00
IUUC-Ete-032322	Echinops telfairi	80.00	0.00e+00	958.00
IUUC-Eca-033324	Equus caballus	93.03	0.00e+00	1174.00
IUUC-Fca-036050	Felis catus	92.71	0.00e+00	1091.00
IUUC-Fal-037664	Ficedula albicollis	99.20	0.00e+00	1211.00
IUUC-Gmo-038624	Gadus morhua	75.48	0.00e+00	870.00
IUUC-Gac-042215	Gasterosteus aculeatus	78.82	0.00e+00	913.00
IUUC-Ggo-045363	Gorilla gorilla	92.88	0.00e+00	1169.00
IUUC-Hsa-046861	Homo sapiens	92.88	0.00e+00	1169.00
IUUC-Kpa-049295	Komagataella pastoris	24.77	5.00e-29	122.00
IUUC-Loc-052873	Lepisosteus oculatus	89.84	0.00e+00	1094.00
IUUC-Laf-053494	Loxodonta africana	92.88	0.00e+00	1167.00
IUUC-Mcc-055731	Macaca mulatta	92.88	0.00e+00	1169.00
IUUC-Mga-059796	Meleagris gallopavo	94.74	0.00e+00	950.00
IUUC-Mvi-060541	Microbotryum violaceum	42.95	2.00e-112	400.00
IUUC-Mmr-060828	Microcebus murinus	93.02	0.00e+00	1166.00
IUUC-Mmu-063862	Mus musculus	93.19	0.00e+00	1170.00
IUUC-Mpu-066835	Mustela putorius furo	96.02	0.00e+00	1181.00
IUUC-Mlu-067993	Myotis lucifugus	92.60	0.00e+00	1159.00
IUUC-Nle-069711	Nomascus leucogenys	93.03	0.00e+00	1172.00
IUUC-Opr-070509	Ochotona princeps	91.64	0.00e+00	1113.00
IUUC-Ont-072346	Oreochromis niloticus	78.86	0.00e+00	952.00
IUUC-Ocu-074398	Oryctolagus cuniculus	95.86	0.00e+00	1173.00
IUUC-Ola-087168	Oryzias latipes	77.87	0.00e+00	946.00
IUUC-Oga-088138	Otolemur garnettii	95.23	0.00e+00	920.00
IUUC-Oar-090454	Ovis aries	95.54	0.00e+00	1170.00
IUUC-Ptr-090850	Pan troglodytes	92.88	0.00e+00	1169.00
IUUC-Pan-092449	Papio anubis	96.02	0.00e+00	1180.00
IUUC-Psi-093490	Pelodiscus sinensis	96.82	0.00e+00	1169.00
IUUC-Pab-098252	Pongo abelii	92.88	0.00e+00	1169.00
IUUC-Pca-100827	Procavia capensis	99.02	0.00e+00	647.00
IUUC-Pva-102223	Pteropus vampyrus	96.07	0.00e+00	1072.00
IUUC-Rno-105683	Rattus norvegicus	92.57	0.00e+00	1156.00
IUUC-Sja-107798	Schizosaccharomyces japonicus	25.65	1.00e-30	127.00
IUUC-Ssc-115238	Sus scrofa	95.74	0.00e+00	1072.00
IUUC-Tgu-117310	Taeniopygia guttata	92.16	0.00e+00	993.00
IUUC-Ttr-129188	Tursiops truncatus	93.49	0.00e+00	1172.00
IUUC-Xtr-132370	Xenopus tropicalis	84.48	0.00e+00	922.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence