iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001357

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01065751

Gene Name

USP48

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000014344.1	ENSAMET00000015795.1	ENSAMEP00000015172.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.60e-73	246.8	90	420
ULD/UDP/UBQ/UBQ_Other	1.00e-10	41.4	947	1009

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle........kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkea 81
           +Gl+Nlg+tCY+N  LQ+ +   elr++l               ++ee+ + + ++++++lq lf+ l++s++++++p+ ++kal+   
   Q: 90   VGLTNLGATCYVNTFLQVWFLNLELRQALYLcpstcsdyMMGDGIQEEK-DYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALG--- 174
           6*****************************9555555443333443332.67888******************************9... PP
   S: 82   eefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfl 170
             +++ +qqDaqEf + +++ le++l                       +++k+   ++++++ F g++   ++c++c+++s+  ++f+
   Q: 175  --LDTGQQQDAQEFSKLFMSLLEDTL-----------------------SKQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFY 238
           ..78899*******************.......................457889999******************************* PP
   S: 171  dlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleL 259
           +l+l+++g++     +l+dc+++f kee+leg+n+y+ce+c++kq+a++k++l +lP +L l+L+Rf f++++++++k+n+++ f + L
   Q: 239  ELELNIQGHK-----QLTDCISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEIL 322
           **********.....9************************************************************************* PP
   S: 260  dlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg................... 327
           d++p+++++      ++ YeL+av++H G s+ sGHY+a+vk+ ++g+W++f+D+ +++++ ++ +   +                   
   Q: 323  DMEPYVEHKGG----SYVYELSAVLIHRGvSAYSGHYIAHVKDpQSGEWYKFNDEDIEKMEGKKLQLGIEedlaepsksqtrkpkcgkg 407
           ******99554....79**************************44555************9999998665999**************** PP
   S: 328  ....staYvlfYk 336
               ++aY+l+Y+
   Q: 408  thcsRNAYMLVYR 420
           ************8 PP

ULD/UDP/UBQ/UBQ_Other

   S: 16   k...vnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihllekks 74
           k   v+   t +eLK +i +++++ p +q+L ++GkiL +d+ tL+ +g+ ++s+i+l  +++
   Q: 947  KallVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILsDDCATLGTLGVIPESVILLKADEP 1009
           344489999************************************************988775 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MAPRLQLEKA AWRWAETVRP EEVSQEHIET AYRIWLEPCI RGVCSRRNCK GNPNCLVGIG 60
EHIWLGEIDE NSFHNIDDPN CERRKKNSFV GLTNLGATCY VNTFLQVWFL NLELRQALYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCCGC GCCTGCAGCT GGAGAAGGCG GCCTGGCGCT GGGCGGAGAC GGTGCGGCCC 60
GAGGAGGTGT CGCAGGAGCA CATCGAGACC GCTTACCGCA TCTGGCTGGA GCCCTGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS50053--UBIQUITIN_2
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0005654--C:nucleoplasm
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	31.83	2.00e-79	291.00
IUUC-Atr-002976	Amborella trichopoda	31.54	2.00e-76	281.00
IUUC-Apl-003773	Anas platyrhynchos	87.96	0.00e+00	1696.00
IUUC-Aca-004466	Anolis carolinensis	81.23	0.00e+00	868.00
IUUC-Aly-006249	Arabidopsis lyrata	30.20	2.00e-69	257.00
IUUC-Ath-006700	Arabidopsis thaliana	31.14	3.00e-78	287.00
IUUC-Ame-011554	Astyanax mexicanus	68.17	0.00e+00	1442.00
IUUC-Bta-012573	Bos taurus	97.69	0.00e+00	2066.00
IUUC-Bdi-014149	Brachypodium distachyon	32.27	7.00e-81	295.00
IUUC-Bol-016289	Brassica oleracea	29.34	1.00e-76	281.00
IUUC-Bra-017205	Brassica rapa	29.21	7.00e-69	255.00
IUUC-Cel-018662	Caenorhabditis elegans	27.65	2.00e-28	122.00
IUUC-Cja-019991	Callithrix jacchus	96.57	0.00e+00	2058.00
IUUC-Cfa-020294	Canis familiaris	99.32	0.00e+00	2110.00
IUUC-Cpo-021706	Cavia porcellus	95.26	0.00e+00	1948.00
IUUC-Cre-022636	Chlamydomonas reinhardtii	32.04	2.00e-42	169.00
IUUC-Csa-023931	Chlorocebus sabaeus	97.97	0.00e+00	2076.00
IUUC-Cho-024566	Choloepus hoffmanni	98.56	3.00e-162	565.00
IUUC-Cin-025307	Ciona intestinalis	46.67	1.00e-74	272.00
IUUC-Csv-026006	Ciona savignyi	36.89	5.00e-151	528.00
IUUC-Cne-027065	Cryptococcus neoformans	28.40	1.00e-69	258.00
IUUC-Dre-027624	Danio rerio	68.95	0.00e+00	1488.00
IUUC-Dno-029633	Dasypus novemcinctus	98.21	0.00e+00	1323.00
IUUC-Dor-030809	Dipodomys ordii	75.03	0.00e+00	1197.00
IUUC-Ete-032818	Echinops telfairi	91.30	0.00e+00	953.00
IUUC-Eca-033692	Equus caballus	98.46	0.00e+00	2085.00
IUUC-Eeu-035185	Erinaceus europaeus	75.18	0.00e+00	801.00
IUUC-Fca-035676	Felis catus	98.46	0.00e+00	2097.00
IUUC-Fal-036913	Ficedula albicollis	86.99	0.00e+00	1834.00
IUUC-Gmo-038532	Gadus morhua	65.31	0.00e+00	1386.00
IUUC-Gga-041041	Gallus gallus	87.09	0.00e+00	1830.00
IUUC-Gac-042570	Gasterosteus aculeatus	66.27	0.00e+00	1417.00
IUUC-Gma-044136	Glycine max	29.87	5.00e-90	326.00
IUUC-Ggo-045367	Gorilla gorilla	93.07	0.00e+00	1943.00
IUUC-Hsa-046019	Homo sapiens	98.17	0.00e+00	2081.00
IUUC-Hvu-047303	Hordeum vulgare	32.78	4.00e-64	239.00
IUUC-Itr-048319	Ictidomys tridecemlineatus	95.74	0.00e+00	2056.00
IUUC-Lch-049989	Latimeria chalumnae	76.15	0.00e+00	1640.00
IUUC-Lpe-051612	Leersia perrieri	32.55	7.00e-79	289.00
IUUC-Loc-052756	Lepisosteus oculatus	70.56	0.00e+00	1534.00
IUUC-Laf-054043	Loxodonta africana	96.78	0.00e+00	2072.00
IUUC-Mcc-054986	Macaca mulatta	96.39	0.00e+00	2058.00
IUUC-Meu-056228	Macropus eugenii	77.95	0.00e+00	870.00
IUUC-Mtr-058762	Medicago truncatula	29.65	2.00e-87	317.00
IUUC-Mga-059896	Meleagris gallopavo	86.60	0.00e+00	1731.00
IUUC-Mvi-060269	Microbotryum violaceum	37.18	2.00e-63	238.00
IUUC-Mmr-060887	Microcebus murinus	98.26	0.00e+00	2080.00
IUUC-Mdo-062506	Monodelphis domestica	93.73	0.00e+00	2001.00
IUUC-Mmu-063642	Mus musculus	92.32	0.00e+00	1994.00
IUUC-Mac-064896	Musa acuminata	31.28	4.00e-76	280.00
IUUC-Mpu-066194	Mustela putorius furo	99.23	0.00e+00	2091.00
IUUC-Mlu-067233	Myotis lucifugus	96.94	0.00e+00	2058.00
IUUC-Nle-069052	Nomascus leucogenys	96.95	0.00e+00	2066.00
IUUC-Opr-070890	Ochotona princeps	94.77	0.00e+00	1246.00
IUUC-Ont-071450	Oreochromis niloticus	64.83	0.00e+00	1372.00
IUUC-Oan-073252	Ornithorhynchus anatinus	90.26	0.00e+00	1065.00
IUUC-Ocu-073796	Oryctolagus cuniculus	97.25	0.00e+00	1774.00
IUUC-Oba-075563	Oryza barthii	31.83	1.00e-79	291.00
IUUC-Obr-076394	Oryza brachyantha	31.92	8.00e-80	292.00
IUUC-Ogl-077339	Oryza glaberrima	37.76	7.00e-40	157.00
IUUC-Ogu-079007	Oryza glumaepatula	32.64	3.00e-73	270.00
IUUC-Oin-079997	Oryza indica	31.83	6.00e-80	292.00
IUUC-Olo-080364	Oryza longistaminata	31.83	7.00e-80	292.00
IUUC-Ome-081165	Oryza meridionalis	32.65	6.00e-74	272.00
IUUC-Oni-083026	Oryza nivara	31.83	6.00e-80	292.00
IUUC-Opu-083284	Oryza punctata	33.45	2.00e-73	271.00
IUUC-Oru-084797	Oryza rufipogon	31.83	6.00e-80	292.00
IUUC-Osa-086221	Oryza sativa	37.76	7.00e-40	157.00
IUUC-Ola-086568	Oryzias latipes	66.26	0.00e+00	1422.00
IUUC-Oga-088687	Otolemur garnettii	96.10	0.00e+00	2049.00
IUUC-Oar-090345	Ovis aries	98.19	0.00e+00	1979.00
IUUC-Ptr-090734	Pan troglodytes	97.97	0.00e+00	2078.00
IUUC-Pan-091704	Papio anubis	94.62	0.00e+00	1991.00
IUUC-Psi-092937	Pelodiscus sinensis	87.34	0.00e+00	1610.00
IUUC-Ppa-095808	Physcomitrella patens	27.51	4.00e-67	250.00
IUUC-Pab-098129	Pongo abelii	98.07	0.00e+00	2080.00
IUUC-Pop-099738	Populus trichocarpa	31.91	9.00e-76	278.00
IUUC-Pca-100647	Procavia capensis	98.49	0.00e+00	688.00
IUUC-Ppe-102091	Prunus persica	31.17	1.00e-82	301.00
IUUC-Pva-102719	Pteropus vampyrus	97.59	0.00e+00	2061.00
IUUC-Rno-105363	Rattus norvegicus	94.02	0.00e+00	2021.00
IUUC-Sha-107620	Sarcophilus harrisii	90.34	0.00e+00	1859.00
IUUC-Smo-109487	Selaginella moellendorffii	27.80	3.00e-83	303.00
IUUC-Sit-110683	Setaria italica	32.45	4.00e-80	293.00
IUUC-Sly-111377	Solanum lycopersicum	30.75	5.00e-79	289.00
IUUC-Stu-111969	Solanum tuberosum	31.37	3.00e-69	256.00
IUUC-Sar-113099	Sorex araneus	96.55	0.00e+00	1742.00
IUUC-Sbi-113833	Sorghum bicolor	42.14	8.00e-57	213.00
IUUC-Ssc-115279	Sus scrofa	91.26	0.00e+00	1373.00
IUUC-Tgu-117519	Taeniopygia guttata	84.61	0.00e+00	1687.00
IUUC-Tru-117651	Takifugu rubripes	65.33	0.00e+00	1410.00
IUUC-Tsy-119201	Tarsius syrichta	94.35	0.00e+00	1822.00
IUUC-Tni-120840	Tetraodon nigroviridis	66.48	0.00e+00	1435.00
IUUC-Tca-121674	Theobroma cacao	28.93	2.00e-83	304.00
IUUC-Tae-125247	Triticum aestivum	26.06	2.00e-82	301.00
IUUC-Tur-126599	Triticum urartu	32.18	1.00e-78	288.00
IUUC-Tbe-127782	Tupaia belangeri	86.70	0.00e+00	1762.00
IUUC-Ttr-128312	Tursiops truncatus	97.01	0.00e+00	2043.00
IUUC-Vpa-130348	Vicugna pacos	98.39	0.00e+00	1985.00
IUUC-Vvi-131353	Vitis vinifera	32.31	1.00e-82	301.00
IUUC-Xtr-132172	Xenopus tropicalis	70.98	0.00e+00	1355.00
IUUC-Xma-133263	Xiphophorus maculatus	67.77	0.00e+00	1401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence