iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005571

Ensembl Protein ID

scaffold_401487.1

UniProt Accession

D7LBJ7; D7LBJ7_ARALL

Genbank Protein ID

EFH55508.1

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_901986

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_401487.1	scaffold_401487.1	scaffold_401487.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	4.00e-14	53.0	539	610

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +kltvk+  gk ++l+vs+d tv++lK +++  ++v p  qkLI++Gk+L   +tL++ ++  g +++l+ ++
   Q: 539  IKLTVKF-GGKSIPLSVSQDCTVKDLKSLLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLMLMASQ 610
           689****.9999**********************************************************875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAYVRGLASF SLTFSPISLR RFRPRLHRNH SVKPNSRIII CNLKSNYSAG KFRELGGLSR 60
SVELDQFITS EEEEEEAEEI GEGFFEAIEE LERMTREPSD ILEEMNHRLS SRELQLMLVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTTTTTTA TTCCTTAGTT ATGGCTTATG TTCGTGGCTT AGCTTCGTTT TCGTTGACCT 60
TCTCACCGAT TTCTCTCCGA AGATTCCGTC CCCGACTTCA TCGTAATCAC AGCGTAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp
IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS51450--LRR
PS51375--PPR
PS50053--UBIQUITIN_2

Pfam

PF13855--LRR_8
PF00240--ubiquitin

SMART

SM00369--LRR_TYP
SM00213--UBQ

KEGG

aly:ARALYDRAFT_901986

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001663	Ailuropoda melanoleuca	31.85	1.00e-15	78.20
IUUC-Atr-002772	Amborella trichopoda	50.80	1.00e-58	218.00
IUUC-Apl-004029	Anas platyrhynchos	35.51	3.00e-14	72.80
IUUC-Ath-006853	Arabidopsis thaliana	95.99	0.00e+00	731.00
IUUC-Ame-011792	Astyanax mexicanus	32.50	1.00e-17	84.70
IUUC-Bta-012937	Bos taurus	31.85	4.00e-15	76.30
IUUC-Bdi-014104	Brachypodium distachyon	54.96	1.00e-107	382.00
IUUC-Bol-016339	Brassica oleracea	85.29	4.00e-176	609.00
IUUC-Bra-016795	Brassica rapa	85.83	3.00e-177	613.00
IUUC-Cel-018313	Caenorhabditis elegans	25.53	2.00e-09	56.60
IUUC-Cja-019359	Callithrix jacchus	42.05	1.00e-15	77.80
IUUC-Cfa-020908	Canis familiaris	39.84	7.00e-18	85.10
IUUC-Cpo-021744	Cavia porcellus	42.34	1.00e-18	87.80
IUUC-Cre-022825	Chlamydomonas reinhardtii	32.29	7.00e-23	100.00
IUUC-Csa-023784	Chlorocebus sabaeus	40.91	4.00e-15	75.90
IUUC-Cho-024851	Choloepus hoffmanni	32.61	1.00e-06	47.00
IUUC-Cin-025241	Ciona intestinalis	28.57	7.00e-14	72.00
IUUC-Csv-025951	Ciona savignyi	31.09	5.00e-15	75.10
IUUC-Cne-027071	Cryptococcus neoformans	35.71	7.00e-04	37.40
IUUC-Dre-027424	Danio rerio	33.12	1.00e-15	78.20
IUUC-Dno-028857	Dasypus novemcinctus	31.37	2.00e-15	77.00
IUUC-Dor-030722	Dipodomys ordii	31.94	6.00e-11	61.20
IUUC-Ete-032265	Echinops telfairi	27.92	2.00e-07	49.70
IUUC-Eca-033505	Equus caballus	33.12	9.00e-17	81.60
IUUC-Eeu-035089	Erinaceus europaeus	42.05	8.00e-15	75.10
IUUC-Fca-036318	Felis catus	31.21	1.00e-16	80.90
IUUC-Fal-037299	Ficedula albicollis	37.98	2.00e-15	77.00
IUUC-Gmo-038494	Gadus morhua	35.00	2.00e-18	87.00
IUUC-Gga-041180	Gallus gallus	27.60	2.00e-16	80.90
IUUC-Gma-043846	Glycine max	60.27	9.00e-110	389.00
IUUC-Ggo-045293	Gorilla gorilla	40.91	4.00e-15	75.90
IUUC-Hsa-046865	Homo sapiens	40.91	6.00e-15	75.50
IUUC-Hvu-047769	Hordeum vulgare	54.85	2.00e-112	397.00
IUUC-Itr-048290	Ictidomys tridecemlineatus	31.21	2.00e-15	77.40
IUUC-Lch-049921	Latimeria chalumnae	32.69	1.00e-09	57.40
IUUC-Loc-052946	Lepisosteus oculatus	30.28	1.00e-08	53.50
IUUC-Laf-054274	Loxodonta africana	32.48	1.00e-16	81.30
IUUC-Mcc-055328	Macaca mulatta	40.91	4.00e-15	75.90
IUUC-Meu-056407	Macropus eugenii	39.29	4.00e-13	69.30
IUUC-Mtr-057683	Medicago truncatula	56.82	5.00e-112	397.00
IUUC-Mga-059898	Meleagris gallopavo	39.53	4.00e-16	79.30
IUUC-Mmr-061558	Microcebus murinus	38.60	1.00e-17	84.30
IUUC-Mdo-062877	Monodelphis domestica	32.52	3.00e-18	86.30
IUUC-Mmu-063525	Mus musculus	32.48	2.00e-15	77.40
IUUC-Mac-064501	Musa acuminata	59.50	9.00e-116	409.00
IUUC-Mpu-066491	Mustela putorius furo	29.94	6.00e-15	75.50
IUUC-Mlu-068182	Myotis lucifugus	41.44	7.00e-18	85.10
IUUC-Nle-069349	Nomascus leucogenys	30.57	2.00e-14	73.90
IUUC-Opr-070326	Ochotona princeps	38.10	2.00e-15	77.00
IUUC-Ont-071685	Oreochromis niloticus	37.89	2.00e-19	90.10
IUUC-Oan-072957	Ornithorhynchus anatinus	31.85	7.00e-16	78.60
IUUC-Ocu-074328	Oryctolagus cuniculus	33.33	1.00e-11	63.90
IUUC-Obr-076454	Oryza brachyantha	54.17	7.00e-114	402.00
IUUC-Ogl-077480	Oryza glaberrima	54.52	4.00e-116	410.00
IUUC-Oin-079319	Oryza indica	56.28	3.00e-75	275.00
IUUC-Ome-081910	Oryza meridionalis	53.06	3.00e-109	388.00
IUUC-Osa-085755	Oryza sativa	53.38	2.00e-33	133.00
IUUC-Ola-087391	Oryzias latipes	34.01	6.00e-12	64.70
IUUC-Oga-088129	Otolemur garnettii	28.57	1.00e-16	81.30
IUUC-Oar-089353	Ovis aries	32.48	1.00e-15	78.20
IUUC-Ptr-091511	Pan troglodytes	40.91	4.00e-15	76.30
IUUC-Pan-092251	Papio anubis	40.91	4.00e-15	76.30
IUUC-Psi-092946	Pelodiscus sinensis	33.88	7.00e-09	53.50
IUUC-Pma-094158	Petromyzon marinus	33.33	3.00e-13	69.70
IUUC-Ppa-095427	Physcomitrella patens	41.16	3.00e-75	274.00
IUUC-Pfo-096094	Poecilia formosa	32.92	5.00e-17	82.40
IUUC-Pab-098187	Pongo abelii	40.91	4.00e-15	75.90
IUUC-Pop-099197	Populus trichocarpa	66.48	2.00e-144	504.00
IUUC-Pca-100526	Procavia capensis	39.77	4.00e-13	69.30
IUUC-Ppe-101851	Prunus persica	62.53	4.00e-129	453.00
IUUC-Pva-102557	Pteropus vampyrus	40.45	2.00e-15	77.00
IUUC-Pgr-103622	Puccinia graminis	31.78	8.00e-07	49.70
IUUC-Pyt-104751	Pyrenophora triticirepentis	34.57	7.00e-08	52.40
IUUC-Rno-105540	Rattus norvegicus	31.45	4.00e-16	79.30
IUUC-Sha-107485	Sarcophilus harrisii	31.90	1.00e-17	84.30
IUUC-Spo-108106	Schizosaccharomyces pombe	29.50	6.00e-08	52.80
IUUC-Smo-109452	Selaginella moellendorffii	39.17	4.00e-47	181.00
IUUC-Sit-110214	Setaria italica	56.63	9.00e-107	379.00
IUUC-Sly-111052	Solanum lycopersicum	59.29	5.00e-129	453.00
IUUC-Stu-112067	Solanum tuberosum	59.84	1.00e-129	455.00
IUUC-Sar-113098	Sorex araneus	31.21	3.00e-12	66.20
IUUC-Sbi-114187	Sorghum bicolor	55.89	4.00e-105	374.00
IUUC-Ssc-116105	Sus scrofa	32.48	2.00e-16	80.50
IUUC-Tgu-116857	Taeniopygia guttata	33.76	2.00e-16	80.10
IUUC-Tru-117930	Takifugu rubripes	35.40	1.00e-16	80.90
IUUC-Tsy-119397	Tarsius syrichta	32.50	9.00e-09	53.90
IUUC-Tni-120714	Tetraodon nigroviridis	36.65	2.00e-17	83.60
IUUC-Tca-121678	Theobroma cacao	66.48	6.00e-140	489.00
IUUC-Tae-125328	Triticum aestivum	55.96	1.00e-114	405.00
IUUC-Tbe-128087	Tupaia belangeri	33.33	5.00e-12	64.30
IUUC-Ttr-128282	Tursiops truncatus	31.85	9.00e-16	78.20
IUUC-Vda-129866	Verticillium dahliae	35.82	9.00e-05	42.00
IUUC-Vpa-130640	Vicugna pacos	31.11	1.00e-13	70.10
IUUC-Vvi-131120	Vitis vinifera	63.74	4.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence