iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-17	62.9	551	584

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH + v+++a+   d t+lvs++ D ti+vW+l+
   Q: 551  GHRGHVNAVAWnpADpTMLVSCGADATIRVWSLD 584
           89**********9667***************986 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MTVDEQLDDV GRKGKKMSVA QRLQNHAQLS PRSQDDPEET ESVIRKEIAL GKYDKATIRI 60
IAQFLDNIGL TSSVETLVEE TGFTIETTSG ARVRANILKG NYDAAIQILE TSNDHITEET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCTCAACT GGAAAATCTG GAATTCGTTT TTGTAGTTTT CAAAATATCA GTGGCGCGTC 60
GTTCCCACTT AACAACTCAA AGTGGTTCGG AAACCCATCG GAGAAGAGGC TGACGAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

cel:CELE_Y39H10A.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001381	Ailuropoda melanoleuca	25.79	6.00e-31	127.00
IUUC-Apl-003200	Anas platyrhynchos	26.29	8.00e-31	127.00
IUUC-Aca-005122	Anolis carolinensis	26.50	1.00e-30	127.00
IUUC-Afl-008669	Aspergillus flavus	22.82	6.00e-20	91.70
IUUC-Ani-009455	Aspergillus nidulans	23.13	5.00e-21	95.50
IUUC-Ame-011448	Astyanax mexicanus	24.83	2.00e-39	155.00
IUUC-Bgr-012047	Blumeria graminis	22.24	7.00e-24	104.00
IUUC-Bta-012566	Bos taurus	25.79	7.00e-31	127.00
IUUC-Bci-013589	Botrytis cinerea	23.77	1.00e-21	97.10
IUUC-Cja-019082	Callithrix jacchus	25.79	7.00e-31	127.00
IUUC-Cfa-020788	Canis familiaris	25.79	6.00e-31	127.00
IUUC-Cpo-022453	Cavia porcellus	25.79	2.00e-30	125.00
IUUC-Csa-023815	Chlorocebus sabaeus	24.91	4.00e-21	95.10
IUUC-Cho-024572	Choloepus hoffmanni	32.79	2.00e-23	102.00
IUUC-Cin-025474	Ciona intestinalis	25.00	2.00e-21	94.70
IUUC-Csv-026251	Ciona savignyi	25.43	3.00e-26	112.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	22.12	9.00e-23	100.00
IUUC-Dre-027404	Danio rerio	27.27	2.00e-31	129.00
IUUC-Dno-029089	Dasypus novemcinctus	25.79	6.00e-31	127.00
IUUC-Dor-030714	Dipodomys ordii	21.04	4.00e-15	74.70
IUUC-Dse-031569	Dothistroma septosporum	22.45	7.00e-17	80.90
IUUC-Dme-032077	Drosophila melanogaster	24.61	2.00e-40	159.00
IUUC-Ete-032986	Echinops telfairi	33.63	3.00e-14	72.00
IUUC-Eca-033943	Equus caballus	25.79	6.00e-31	127.00
IUUC-Eeu-034468	Erinaceus europaeus	32.37	2.00e-15	76.30
IUUC-Fca-036556	Felis catus	26.22	4.00e-29	121.00
IUUC-Fal-036639	Ficedula albicollis	26.50	2.00e-30	126.00
IUUC-Fox-037720	Fusarium oxysporum	23.14	3.00e-24	105.00
IUUC-Gmo-038610	Gadus morhua	24.05	3.00e-38	151.00
IUUC-Gga-040577	Gallus gallus	26.50	3.00e-30	125.00
IUUC-Gac-041352	Gasterosteus aculeatus	24.16	4.00e-37	148.00
IUUC-Ggo-044684	Gorilla gorilla	25.79	6.00e-31	127.00
IUUC-Hsa-046838	Homo sapiens	25.79	6.00e-31	127.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	25.79	6.00e-31	127.00
IUUC-Lch-049848	Latimeria chalumnae	26.08	3.00e-32	131.00
IUUC-Loc-052708	Lepisosteus oculatus	26.78	2.00e-30	125.00
IUUC-Laf-054153	Loxodonta africana	25.50	5.00e-31	127.00
IUUC-Mcc-054742	Macaca mulatta	25.79	6.00e-31	127.00
IUUC-Mtr-058261	Medicago truncatula	25.50	4.00e-31	128.00
IUUC-Mmr-060823	Microcebus murinus	25.79	1.00e-30	127.00
IUUC-Mdo-062394	Monodelphis domestica	26.50	2.00e-30	126.00
IUUC-Mmu-063924	Mus musculus	26.07	4.00e-31	128.00
IUUC-Mpu-066858	Mustela putorius furo	26.09	7.00e-31	127.00
IUUC-Mlu-067659	Myotis lucifugus	25.79	5.00e-31	127.00
IUUC-Ncr-068832	Neurospora crassa	18.79	4.00e-18	85.10
IUUC-Nle-069654	Nomascus leucogenys	25.79	6.00e-31	127.00
IUUC-Opr-071198	Ochotona princeps	41.67	2.00e-07	48.90
IUUC-Ont-071748	Oreochromis niloticus	23.72	4.00e-38	151.00
IUUC-Oan-073045	Ornithorhynchus anatinus	26.91	3.00e-28	119.00
IUUC-Ocu-073812	Oryctolagus cuniculus	25.79	6.00e-31	127.00
IUUC-Ola-086670	Oryzias latipes	24.53	2.00e-36	146.00
IUUC-Oga-088723	Otolemur garnettii	25.14	9.00e-29	120.00
IUUC-Oar-090125	Ovis aries	25.79	8.00e-31	127.00
IUUC-Ptr-090787	Pan troglodytes	25.79	6.00e-31	127.00
IUUC-Psi-093579	Pelodiscus sinensis	26.80	1.00e-30	126.00
IUUC-Pma-094254	Petromyzon marinus	28.01	1.00e-36	145.00
IUUC-Pfo-096394	Poecilia formosa	24.13	6.00e-39	154.00
IUUC-Pab-098459	Pongo abelii	25.79	1.00e-29	123.00
IUUC-Pca-100574	Procavia capensis	31.13	7.00e-24	103.00
IUUC-Pva-102404	Pteropus vampyrus	25.08	9.00e-26	110.00
IUUC-Rno-105335	Rattus norvegicus	26.07	3.00e-31	128.00
IUUC-Sha-106497	Sarcophilus harrisii	25.79	1.00e-30	126.00
IUUC-Sar-113539	Sorex araneus	32.79	1.00e-23	103.00
IUUC-Sre-115051	Sporisorium reilianum	30.52	5.00e-15	75.10
IUUC-Ssc-115532	Sus scrofa	25.79	6.00e-31	127.00
IUUC-Tgu-116728	Taeniopygia guttata	26.50	2.00e-30	125.00
IUUC-Tru-118471	Takifugu rubripes	24.25	6.00e-39	154.00
IUUC-Tsy-119284	Tarsius syrichta	31.13	5.00e-24	104.00
IUUC-Tni-119720	Tetraodon nigroviridis	23.83	1.00e-37	149.00
IUUC-Tre-122234	Trichoderma reesei	22.13	2.00e-21	96.30
IUUC-Ttr-129184	Tursiops truncatus	25.79	8.00e-31	127.00
IUUC-Uma-129354	Ustilago maydis	26.73	3.00e-13	69.30
IUUC-Vpa-130400	Vicugna pacos	26.07	2.00e-30	125.00
IUUC-Vvi-131027	Vitis vinifera	23.11	7.00e-31	127.00
IUUC-Xtr-132619	Xenopus tropicalis	26.22	8.00e-30	124.00
IUUC-Xma-134128	Xiphophorus maculatus	24.52	9.00e-39	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence