iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000006646.3	ENSSSCT00000032666.1	ENSSSCP00000030907.1
ENSSSCG00000006646.3	ENSSSCT00000034834.1	ENSSSCP00000029414.1
ENSSSCG00000006646.3	ENSSSCT00000033419.1	ENSSSCP00000030800.1
ENSSSCG00000006646.3	ENSSSCT00000007282.2	ENSSSCP00000007087.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	96.58	0.00e+00	1391.00	IUUC-Hsa-046946

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAATTANPEM TADVPSLGPA ITSGNPGPGI QGGGAIVQRA IKRRPGLDFD DDGEGNSKFL 60
RCDDDQMSND KERFARSDDE QSSADKERLA RENHSEIERR RRNKMTAYIT ELSDMVPTCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTGACCAC GCCTCCTGGG CGGGGTCTCT CCGCCGTAGG GGTTGGGGAC GGTGGGGGTT 60
GCTGCAGCCG CCATCTTGGA TTCCGCGGTA GCGGTGGCGG CATTACGGCG CCGCGTCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR011598--bHLH_dom
IPR001067--Nuc_translocat
IPR001610--PAC
IPR000014--PAS
IPR013767--PAS_fold

PROSITE

PS50888--BHLH
PS50112--PAS

Pfam

PF00010--HLH
PF00989--PAS

PRINTS

PR00785--NCTRNSLOCATR

SMART

SM00353--HLH
SM00086--PAC
SM00091--PAS

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016604--C:nuclear body
GO:0090575--C:RNA polymerase II transcription factor complex
GO:0004874--F:aryl hydrocarbon receptor activity
GO:0035326--F:enhancer binding
GO:0043565--F:sequence-specific DNA binding
GO:0003713--F:transcription coactivator activity
GO:0003705--F:transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
GO:0030154--P:cell differentiation
GO:0001892--P:embryonic placenta development
GO:0046886--P:positive regulation of hormone biosynthetic process
GO:0033235--P:positive regulation of protein sumoylation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0010575--P:positive regulation of vascular endothelial growth factor production
GO:0043619--P:regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0001666--P:response to hypoxia
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001940	Ailuropoda melanoleuca	95.82	0.00e+00	1377.00
IUUC-Apl-003615	Anas platyrhynchos	81.55	0.00e+00	1274.00
IUUC-Aca-005047	Anolis carolinensis	78.26	0.00e+00	1193.00
IUUC-Bta-012420	Bos taurus	97.70	0.00e+00	1454.00
IUUC-Cja-019740	Callithrix jacchus	95.82	0.00e+00	1350.00
IUUC-Cfa-020981	Canis familiaris	96.16	0.00e+00	1372.00
IUUC-Cpo-021428	Cavia porcellus	93.51	0.00e+00	1329.00
IUUC-Csa-023451	Chlorocebus sabaeus	96.46	0.00e+00	1417.00
IUUC-Cho-024979	Choloepus hoffmanni	79.80	6.00e-165	574.00
IUUC-Cne-027059	Cryptococcus neoformans	31.76	2.00e-08	55.10
IUUC-Dno-029839	Dasypus novemcinctus	90.09	0.00e+00	1390.00
IUUC-Eca-034359	Equus caballus	92.84	0.00e+00	1360.00
IUUC-Fca-035413	Felis catus	91.97	0.00e+00	1397.00
IUUC-Gga-041165	Gallus gallus	78.62	0.00e+00	1209.00
IUUC-Ggo-045192	Gorilla gorilla	96.80	0.00e+00	1347.00
IUUC-Hsa-046946	Homo sapiens	96.58	0.00e+00	1337.00
IUUC-Itr-048123	Ictidomys tridecemlineatus	95.03	0.00e+00	1431.00
IUUC-Lch-050137	Latimeria chalumnae	65.68	0.00e+00	916.00
IUUC-Laf-053433	Loxodonta africana	95.53	0.00e+00	1407.00
IUUC-Mcc-055174	Macaca mulatta	96.33	0.00e+00	1412.00
IUUC-Mga-059606	Meleagris gallopavo	77.95	0.00e+00	1156.00
IUUC-Mmr-060626	Microcebus murinus	92.41	0.00e+00	1361.00
IUUC-Mdo-062779	Monodelphis domestica	88.87	0.00e+00	1333.00
IUUC-Mmu-064192	Mus musculus	91.53	0.00e+00	1400.00
IUUC-Mpu-066471	Mustela putorius furo	96.69	0.00e+00	1305.00
IUUC-Mlu-066968	Myotis lucifugus	96.42	0.00e+00	1493.00
IUUC-Nle-069762	Nomascus leucogenys	96.17	0.00e+00	1374.00
IUUC-Oan-073371	Ornithorhynchus anatinus	73.89	0.00e+00	1058.00
IUUC-Ocu-074390	Oryctolagus cuniculus	85.99	0.00e+00	1251.00
IUUC-Oga-088408	Otolemur garnettii	95.28	0.00e+00	1428.00
IUUC-Oar-089959	Ovis aries	97.59	0.00e+00	1466.00
IUUC-Ptr-091057	Pan troglodytes	96.71	0.00e+00	1361.00
IUUC-Pan-092602	Papio anubis	95.45	0.00e+00	1397.00
IUUC-Psi-093661	Pelodiscus sinensis	79.13	0.00e+00	1263.00
IUUC-Pab-098708	Pongo abelii	96.46	0.00e+00	1378.00
IUUC-Rno-105732	Rattus norvegicus	91.01	0.00e+00	1348.00
IUUC-Sha-107369	Sarcophilus harrisii	88.51	0.00e+00	1317.00
IUUC-Smo-108833	Selaginella moellendorffii	34.78	4.00e-05	43.50
IUUC-Sar-113492	Sorex araneus	90.29	0.00e+00	724.00
IUUC-Tgu-116662	Taeniopygia guttata	76.74	0.00e+00	1167.00
IUUC-Tni-120034	Tetraodon nigroviridis	55.25	0.00e+00	701.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence