iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000014338.1	ENSSHAT00000017000.1	ENSSHAP00000016858.1
ENSSHAG00000014338.1	ENSSHAT00000017001.1	ENSSHAP00000016859.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-42	140.2	289	327
UBD/Beta-Prp	5.10e-63	213.2	301	493

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + v++l++ ++ + lv++s+D t ++WD+rt  +++
   Q: 289  GHLSAVYGLDLhPTiDVLVTCSRDSTARIWDVRTKASVH 327
           8***********9999****************9976665 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
           p  ++l+t srd+t ++wdv+t+  +++l gh+++v++vk++  ++ ++tgs D ti++wdl +gk+ +tl++h++sv+++ ++p  ++
   Q: 301  PTIDVLVTCSRDSTARIWDVRTKASVHTLAGHTNAVATVKCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 389
           55567777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.......tgghtdsvyslsfds 190
           ++sGs d+ i+ w+ + g  ++  lsgh++++n+++v++ + +lvsG++++t+ lWd +tg   ++        + + ++ +   +fd+
   Q: 390  FASGSPDN-IKQWKFPDGNFIQ-NLSGHNAIINTLAVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVhaavqpgSLDSESGIFACAFDQ 475
           77777554.7777777777777.7777777777777777.5677777777777777777777777776544444222444444455777 PP
   S: 191  ngkelvsgsldgtvklwd 208
           +  +l+++  d+t+k++ 
   Q: 476  SESRLLTAEADKTIKVYR 493
           777777777777777774 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MVEEVQKHSV HTLVFRSLKR THDMFVADNA KPVQLDEESH KLKMAVKLHT EYGPVLHMPI 60
LKENLREKGS QSAVDAYGHK QYPANQGQEL EYIVTGTHPY PPGPGVALTA DTKIQRMPSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAGTTCCT AATGAATTCG ATGCCAAAAA GCGGGAAAAA CTCCTAACGA ATCTGCCTTT 60
TGACACGAGA AAAAGCGGGG ATAAGCTTGG CAGAGTTCCC AGAGAACTTG CAATGTCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005662--C:DNA replication factor A complex
GO:0001650--C:fibrillar center
GO:0031965--C:nuclear membrane
GO:0016607--C:nuclear speck
GO:1900087--P:positive regulation of G1/S transition of mitotic cell cycle
GO:0034504--P:protein localization to nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	45.80	1.00e-125	443.00
IUUC-Aml-001605	Ailuropoda melanoleuca	90.10	0.00e+00	975.00
IUUC-Atr-002757	Amborella trichopoda	47.25	1.00e-125	442.00
IUUC-Apl-003198	Anas platyrhynchos	91.30	0.00e+00	998.00
IUUC-Aca-004683	Anolis carolinensis	91.68	0.00e+00	1002.00
IUUC-Aly-005775	Arabidopsis lyrata	58.98	5.00e-122	431.00
IUUC-Ath-007460	Arabidopsis thaliana	51.84	4.00e-122	431.00
IUUC-Ago-007884	Ashbya gossypii	48.42	2.00e-104	372.00
IUUC-Acl-008153	Aspergillus clavatus	62.92	8.00e-126	443.00
IUUC-Afl-008384	Aspergillus flavus	59.29	7.00e-127	447.00
IUUC-Afu-009045	Aspergillus fumigatus	63.53	1.00e-126	446.00
IUUC-Ani-009229	Aspergillus nidulans	63.11	8.00e-126	443.00
IUUC-Ang-009812	Aspergillus niger	64.47	3.00e-121	427.00
IUUC-Aor-010059	Aspergillus oryzae	59.29	7.00e-127	447.00
IUUC-Ate-010351	Aspergillus terreus	63.83	1.00e-132	466.00
IUUC-Ame-011613	Astyanax mexicanus	60.08	1.00e-161	562.00
IUUC-Bgr-012042	Blumeria graminis	54.07	2.00e-131	462.00
IUUC-Bta-012406	Bos taurus	89.56	0.00e+00	964.00
IUUC-Bci-013760	Botrytis cinerea	57.48	1.00e-130	459.00
IUUC-Bdi-014776	Brachypodium distachyon	56.31	2.00e-128	452.00
IUUC-Bol-016189	Brassica oleracea	58.98	5.00e-122	431.00
IUUC-Bra-018044	Brassica rapa	58.98	6.00e-122	430.00
IUUC-Cel-018651	Caenorhabditis elegans	52.43	2.00e-150	525.00
IUUC-Cja-019974	Callithrix jacchus	89.94	0.00e+00	967.00
IUUC-Cfa-021085	Canis familiaris	90.14	0.00e+00	978.00
IUUC-Cpo-021458	Cavia porcellus	89.75	0.00e+00	972.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	58.48	6.00e-121	426.00
IUUC-Csa-023883	Chlorocebus sabaeus	89.75	0.00e+00	965.00
IUUC-Cho-024623	Choloepus hoffmanni	89.45	0.00e+00	950.00
IUUC-Cin-025190	Ciona intestinalis	60.04	0.00e+00	634.00
IUUC-Csv-026367	Ciona savignyi	59.32	0.00e+00	636.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	62.72	7.00e-136	476.00
IUUC-Cne-027069	Cryptococcus neoformans	48.15	4.00e-124	437.00
IUUC-Cme-027233	Cyanidioschyzon merolae	30.40	3.00e-33	135.00
IUUC-Dre-028260	Danio rerio	80.27	0.00e+00	870.00
IUUC-Dno-029112	Dasypus novemcinctus	90.33	0.00e+00	974.00
IUUC-Dor-031118	Dipodomys ordii	90.05	0.00e+00	771.00
IUUC-Dse-031493	Dothistroma septosporum	44.55	7.00e-122	430.00
IUUC-Dme-032138	Drosophila melanogaster	75.46	1.00e-156	546.00
IUUC-Ete-032411	Echinops telfairi	79.57	0.00e+00	782.00
IUUC-Eca-033521	Equus caballus	90.14	0.00e+00	982.00
IUUC-Eeu-035249	Erinaceus europaeus	79.37	0.00e+00	656.00
IUUC-Fca-036358	Felis catus	89.56	0.00e+00	971.00
IUUC-Fal-036933	Ficedula albicollis	91.30	0.00e+00	989.00
IUUC-Fox-037713	Fusarium oxysporum	55.58	2.00e-134	472.00
IUUC-Fso-038380	Fusarium solani	63.41	2.00e-134	471.00
IUUC-Gmo-039133	Gadus morhua	80.35	0.00e+00	870.00
IUUC-Ggr-039915	Gaeumannomyces graminis	64.94	6.00e-129	454.00
IUUC-Gga-041176	Gallus gallus	90.33	0.00e+00	992.00
IUUC-Gac-042344	Gasterosteus aculeatus	78.53	0.00e+00	863.00
IUUC-Gma-043328	Glycine max	47.28	2.00e-126	446.00
IUUC-Ggo-044478	Gorilla gorilla	89.56	0.00e+00	963.00
IUUC-Hsa-046037	Homo sapiens	89.75	0.00e+00	964.00
IUUC-Hvu-047349	Hordeum vulgare	49.59	2.00e-129	455.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	89.94	0.00e+00	974.00
IUUC-Kpa-049343	Komagataella pastoris	57.36	1.00e-115	409.00
IUUC-Lch-049830	Latimeria chalumnae	87.04	0.00e+00	943.00
IUUC-Lpe-051442	Leersia perrieri	46.56	7.00e-126	443.00
IUUC-Loc-051794	Lepisosteus oculatus	83.53	0.00e+00	887.00
IUUC-Lma-053137	Leptosphaeria maculans	43.80	2.00e-123	435.00
IUUC-Laf-053471	Loxodonta africana	89.13	0.00e+00	965.00
IUUC-Mcc-055627	Macaca mulatta	89.94	0.00e+00	968.00
IUUC-Meu-056148	Macropus eugenii	83.27	0.00e+00	880.00
IUUC-Mor-056960	Magnaporthe oryzae	64.53	1.00e-133	469.00
IUUC-Mtr-057816	Medicago truncatula	45.78	4.00e-123	434.00
IUUC-Mla-059031	Melampsora laricipopulina	63.95	6.00e-124	437.00
IUUC-Mga-059337	Meleagris gallopavo	90.87	0.00e+00	994.00
IUUC-Mvi-060217	Microbotryum violaceum	59.49	2.00e-126	445.00
IUUC-Mmr-061018	Microcebus murinus	90.52	0.00e+00	980.00
IUUC-Mdo-062863	Monodelphis domestica	98.07	0.00e+00	1027.00
IUUC-Mmu-063988	Mus musculus	88.78	0.00e+00	952.00
IUUC-Mac-064459	Musa acuminata	62.82	5.00e-119	421.00
IUUC-Mpu-066559	Mustela putorius furo	90.33	0.00e+00	979.00
IUUC-Mlu-067361	Myotis lucifugus	89.88	0.00e+00	950.00
IUUC-Nfi-068492	Neosartorya fischeri	63.83	8.00e-127	446.00
IUUC-Ncr-068808	Neurospora crassa	55.47	7.00e-134	470.00
IUUC-Nle-069875	Nomascus leucogenys	89.94	0.00e+00	967.00
IUUC-Opr-070462	Ochotona princeps	96.62	3.00e-156	544.00
IUUC-Ont-071365	Oreochromis niloticus	78.92	0.00e+00	867.00
IUUC-Oan-072708	Ornithorhynchus anatinus	95.34	0.00e+00	1031.00
IUUC-Ocu-074594	Oryctolagus cuniculus	89.56	0.00e+00	968.00
IUUC-Oba-075570	Oryza barthii	61.08	6.00e-124	437.00
IUUC-Obr-076366	Oryza brachyantha	62.03	1.00e-88	318.00
IUUC-Ogl-077153	Oryza glaberrima	61.08	4.00e-123	434.00
IUUC-Ogu-078540	Oryza glumaepatula	61.08	6.00e-124	437.00
IUUC-Oin-079612	Oryza indica	60.18	6.00e-122	430.00
IUUC-Olo-081077	Oryza longistaminata	60.18	6.00e-122	430.00
IUUC-Ome-081236	Oryza meridionalis	59.88	1.00e-121	429.00
IUUC-Oni-082499	Oryza nivara	61.08	6.00e-124	437.00
IUUC-Opu-083499	Oryza punctata	60.18	6.00e-122	430.00
IUUC-Oru-084276	Oryza rufipogon	61.08	6.00e-124	437.00
IUUC-Osa-085849	Oryza sativa	61.08	6.00e-124	437.00
IUUC-Ola-086655	Oryzias latipes	76.30	0.00e+00	834.00
IUUC-Olu-087637	Ostreococcus lucimarinus	56.55	3.00e-116	411.00
IUUC-Oga-087934	Otolemur garnettii	90.54	0.00e+00	978.00
IUUC-Oar-090185	Ovis aries	89.19	0.00e+00	959.00
IUUC-Ptr-091198	Pan troglodytes	89.94	0.00e+00	967.00
IUUC-Pan-092622	Papio anubis	89.75	0.00e+00	965.00
IUUC-Psi-093320	Pelodiscus sinensis	91.89	0.00e+00	1000.00
IUUC-Pma-094638	Petromyzon marinus	77.76	0.00e+00	857.00
IUUC-Pno-094826	Phaeosphaeria nodorum	49.12	4.00e-102	364.00
IUUC-Ppa-095576	Physcomitrella patens	62.82	2.00e-121	429.00
IUUC-Pfo-096894	Poecilia formosa	78.81	0.00e+00	860.00
IUUC-Pab-098020	Pongo abelii	89.94	0.00e+00	966.00
IUUC-Pop-099180	Populus trichocarpa	46.72	1.00e-121	429.00
IUUC-Pca-100909	Procavia capensis	83.33	0.00e+00	758.00
IUUC-Ppe-101346	Prunus persica	45.49	3.00e-120	425.00
IUUC-Pva-102167	Pteropus vampyrus	74.08	0.00e+00	754.00
IUUC-Pgr-103516	Puccinia graminis	49.90	5.00e-127	447.00
IUUC-Ptt-103738	Puccinia triticina	49.90	3.00e-128	451.00
IUUC-Pte-104352	Pyrenophora teres	56.47	6.00e-127	447.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	57.06	6.00e-128	450.00
IUUC-Rno-105291	Rattus norvegicus	89.36	0.00e+00	962.00
IUUC-Sce-106204	Saccharomyces cerevisiae	48.80	3.00e-101	362.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	62.58	4.00e-127	447.00
IUUC-Spo-108049	Schizosaccharomyces pombe	48.62	5.00e-133	467.00
IUUC-Smo-109043	Selaginella moellendorffii	59.40	1.00e-122	432.00
IUUC-Sit-110431	Setaria italica	56.71	7.00e-129	453.00
IUUC-Sly-111391	Solanum lycopersicum	51.45	1.00e-115	410.00
IUUC-Stu-112364	Solanum tuberosum	54.10	9.00e-94	336.00
IUUC-Sar-113450	Sorex araneus	94.86	0.00e+00	702.00
IUUC-Sbi-113829	Sorghum bicolor	48.88	2.00e-128	452.00
IUUC-Sre-115153	Sporisorium reilianum	60.43	9.00e-119	420.00
IUUC-Ssc-115798	Sus scrofa	89.38	0.00e+00	969.00
IUUC-Tgu-117417	Taeniopygia guttata	92.02	0.00e+00	995.00
IUUC-Tru-117615	Takifugu rubripes	76.36	0.00e+00	801.00
IUUC-Tsy-119480	Tarsius syrichta	90.27	0.00e+00	965.00
IUUC-Tni-119847	Tetraodon nigroviridis	76.60	0.00e+00	831.00
IUUC-Tca-121287	Theobroma cacao	45.44	1.00e-124	439.00
IUUC-Tre-122010	Trichoderma reesei	63.27	4.00e-139	488.00
IUUC-Tvi-122475	Trichoderma virens	64.83	1.00e-137	483.00
IUUC-Tae-124397	Triticum aestivum	48.99	4.00e-131	461.00
IUUC-Tur-126116	Triticum urartu	49.24	4.00e-98	351.00
IUUC-Tme-126992	Tuber melanosporum	63.83	9.00e-133	466.00
IUUC-Tbe-127803	Tupaia belangeri	79.53	0.00e+00	691.00
IUUC-Ttr-128933	Tursiops truncatus	89.94	0.00e+00	971.00
IUUC-Uma-129447	Ustilago maydis	58.57	1.00e-114	406.00
IUUC-Vda-129780	Verticillium dahliae	61.88	3.00e-134	471.00
IUUC-Vpa-130557	Vicugna pacos	78.26	5.00e-104	371.00
IUUC-Vvi-130918	Vitis vinifera	52.87	7.00e-118	417.00
IUUC-Xtr-132409	Xenopus tropicalis	88.61	0.00e+00	919.00
IUUC-Xma-133420	Xiphophorus maculatus	78.53	0.00e+00	861.00
IUUC-Yli-134362	Yarrowia lipolytica	58.05	1.00e-118	419.00
IUUC-Zma-135804	Zea mays	59.59	2.00e-121	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence