iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014452

Ensembl Protein ID

BRADI3G36460.1

UniProt Accession

I1I788; I1I788_BRADI

Genbank Protein ID

KQJ98358.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100823797; BRADI_3g36460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G36460	BRADI3G36460.1	BRADI3G36460.1
BRADI3G36460	BRADI3G36460.2	BRADI3G36460.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-21	76.8	161	202
ULD/UDP/UBQ/UBQ_PIM	4.20e-21	75.2	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e  ++ + eMG   +dr++++ aLraa+nn+e+AveyL++g
   Q: 161  LEGTVQSILEMGggaWDRDTVVHALRAAFNNPERAVEYLYTG 202
           57789***********************************87 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           mk+ +ktlkg+ fe+ev++ ++v +lK++i+  +g   +p++qq LI++G++Lk+dttL+e+++ ++++++++++k+
   Q: 1    MKVSIKTLKGSSFEIEVDPTSKVVDLKKLIENTQGqnvYPADQQMLIHQGNVLKNDTTLEENKVLENNFIVIMLSKK 77
           99***********************************************************************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MKVSIKTLKG SSFEIEVDPT SKVVDLKKLI ENTQGQNVYP ADQQMLIHQG NVLKNDTTLE 60
ENKVLENNFI VIMLSKKGST SAASGTAKEP TKQPMVDRAA PVAPAMQLPA EQTPVSTPVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCATACAC AACTACTACC CGACATCCCT CCCCTTTCTT TCCCCTTGCC CACTCTTCTC 60
CTAACCCTCG AGCTCGACGC CAAAGGCTGC GCGAGATAGC GTCCCGACCG GCGGCGTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003371	Anas platyrhynchos	35.43	2.00e-28	119.00
IUUC-Bol-016493	Brassica oleracea	67.62	5.00e-85	306.00
IUUC-Bra-017582	Brassica rapa	67.62	1.00e-84	306.00
IUUC-Eeu-034721	Erinaceus europaeus	34.51	4.00e-15	74.70
IUUC-Fal-037148	Ficedula albicollis	35.57	8.00e-27	114.00
IUUC-Gga-040544	Gallus gallus	32.53	5.00e-27	114.00
IUUC-Lpe-050929	Leersia perrieri	74.82	3.00e-152	530.00
IUUC-Oba-075872	Oryza barthii	78.70	4.00e-153	533.00
IUUC-Ogl-077021	Oryza glaberrima	78.70	4.00e-153	533.00
IUUC-Ogu-078101	Oryza glumaepatula	79.31	9.00e-158	548.00
IUUC-Oin-079727	Oryza indica	76.72	4.00e-152	530.00
IUUC-Olo-080382	Oryza longistaminata	78.57	4.00e-157	546.00
IUUC-Ome-081652	Oryza meridionalis	78.82	6.00e-157	546.00
IUUC-Oni-082847	Oryza nivara	78.95	3.00e-153	533.00
IUUC-Opu-083789	Oryza punctata	79.56	2.00e-156	544.00
IUUC-Oru-085266	Oryza rufipogon	76.47	2.00e-151	527.00
IUUC-Osa-085859	Oryza sativa	76.47	2.00e-151	527.00
IUUC-Pte-104303	Pyrenophora teres	45.04	3.00e-21	95.50
IUUC-Pyt-104580	Pyrenophora triticirepentis	45.04	3.00e-21	95.50
IUUC-Tgu-116918	Taeniopygia guttata	35.57	6.00e-27	114.00
IUUC-Vvi-131039	Vitis vinifera	70.37	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence