iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dno-029058

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

BRCA1/BRCA2-containing complex, subunit 3 isoform 1 (Predicted)

Genbank Nucleotide ID

DP001101

Gene Name

PSMD14; BRCC3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDNOG00000009794.3	ENSDNOT00000009795.3	ENSDNOP00000007588.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/JAMM	5.10e-08	33.1	113	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/JAMM

   S: 1    HSHPgftcwlSsVD 14
           HSHPgf+cwlS+VD
   Q: 113  HSHPGFGCWLSGVD 126
           *************9 PP

Organism

Dasypus novemcinctus

Protein Sequence
(Fasta)

IDQILGVFSF CSHLGQGPPT DAPAVDTAEQ VYISSLALLK MLKHGRAGVP MEVMGLMLGE 60
FVDDYTVRVI DVFAMPQSGT GVSVEAVDPV FQAKMLDMLK QTGRPEMVVG WYHSHPGFGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGATCAGA TTTTGGGAGT ATTTTCATGT TAGCTACACC TTTTCGAACC AGTTTGTTCA 60
CACCTGGGAC AATTGTGTTA AATCTGTTGT TGTAGAGAGA GGGAACAACT TCATGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil

Interpro

IPR000555--JAMM/MPN+_dom
IPR033860--MPN_BRCC36

Pfam

PF01398--JAB

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0070552--C:BRISC complex
GO:0005737--C:cytoplasm
GO:0000152--C:nuclear ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0030234--F:enzyme regulator activity
GO:0008237--F:metallopeptidase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0006302--P:double-strand break repair
GO:0031572--P:G2 DNA damage checkpoint
GO:0070537--P:histone H2A K63-linked deubiquitination
GO:0045739--P:positive regulation of DNA repair
GO:0010165--P:response to X-ray

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000544	Aegilops tauschii	79.73	1.00e-133	468.00
IUUC-Aml-001416	Ailuropoda melanoleuca	100.00	1.00e-174	605.00
IUUC-Atr-002629	Amborella trichopoda	83.99	2.00e-131	461.00
IUUC-Apl-004046	Anas platyrhynchos	99.33	6.00e-177	612.00
IUUC-Aca-005228	Anolis carolinensis	99.31	2.00e-173	600.00
IUUC-Aly-005457	Arabidopsis lyrata	78.32	6.00e-135	473.00
IUUC-Ath-007290	Arabidopsis thaliana	78.32	3.00e-135	474.00
IUUC-Ago-007866	Ashbya gossypii	64.55	3.00e-110	391.00
IUUC-Acl-008338	Aspergillus clavatus	70.59	9.00e-108	382.00
IUUC-Afl-008431	Aspergillus flavus	70.98	4.00e-121	427.00
IUUC-Afu-008909	Aspergillus fumigatus	70.98	9.00e-116	409.00
IUUC-Ani-009174	Aspergillus nidulans	70.21	4.00e-122	430.00
IUUC-Ang-009854	Aspergillus niger	70.00	4.00e-120	424.00
IUUC-Aor-009942	Aspergillus oryzae	70.98	9.00e-121	426.00
IUUC-Ate-010377	Aspergillus terreus	70.63	8.00e-121	426.00
IUUC-Ame-011628	Astyanax mexicanus	97.71	7.00e-153	532.00
IUUC-Bgr-012263	Blumeria graminis	69.04	7.00e-108	383.00
IUUC-Bta-012375	Bos taurus	100.00	1.00e-174	605.00
IUUC-Bci-013850	Botrytis cinerea	71.68	2.00e-111	395.00
IUUC-Bdi-014135	Brachypodium distachyon	83.27	3.00e-130	457.00
IUUC-Bol-016172	Brassica oleracea	78.32	3.00e-135	474.00
IUUC-Bra-017926	Brassica rapa	78.32	3.00e-135	474.00
IUUC-Cel-018247	Caenorhabditis elegans	76.71	2.00e-133	468.00
IUUC-Cja-019210	Callithrix jacchus	100.00	3.00e-178	617.00
IUUC-Cfa-020926	Canis familiaris	98.28	2.00e-169	587.00
IUUC-Cpo-021572	Cavia porcellus	100.00	1.00e-174	605.00
IUUC-Cre-022925	Chlamydomonas reinhardtii	77.13	8.00e-132	462.00
IUUC-Csa-023496	Chlorocebus sabaeus	100.00	1.00e-174	605.00
IUUC-Cho-024525	Choloepus hoffmanni	92.93	8.00e-164	568.00
IUUC-Cin-025492	Ciona intestinalis	89.15	3.00e-159	553.00
IUUC-Cgl-026493	Colletotrichum gloeosporioides	67.82	4.00e-101	360.00
IUUC-Cne-026785	Cryptococcus neoformans	69.93	5.00e-117	413.00
IUUC-Cme-027105	Cyanidioschyzon merolae	61.17	5.00e-101	360.00
IUUC-Dre-028788	Danio rerio	98.98	2.00e-175	607.00
IUUC-Dor-031015	Dipodomys ordii	91.16	3.00e-155	540.00
IUUC-Dse-031242	Dothistroma septosporum	71.93	5.00e-123	433.00
IUUC-Dme-031668	Drosophila melanogaster	89.46	4.00e-160	556.00
IUUC-Ete-033146	Echinops telfairi	90.94	9.00e-142	495.00
IUUC-Eca-033734	Equus caballus	100.00	1.00e-174	605.00
IUUC-Eeu-035168	Erinaceus europaeus	71.85	3.00e-92	331.00
IUUC-Fca-036426	Felis catus	100.00	1.00e-174	605.00
IUUC-Fal-036954	Ficedula albicollis	99.31	2.00e-173	600.00
IUUC-Fox-037838	Fusarium oxysporum	71.28	6.00e-119	420.00
IUUC-Fso-038374	Fusarium solani	69.76	7.00e-119	420.00
IUUC-Gmo-038918	Gadus morhua	98.28	8.00e-172	595.00
IUUC-Ggr-039954	Gaeumannomyces graminis	69.90	8.00e-120	423.00
IUUC-Gga-040377	Gallus gallus	99.31	2.00e-173	600.00
IUUC-Gac-042386	Gasterosteus aculeatus	95.48	2.00e-177	614.00
IUUC-Gma-042811	Glycine max	82.53	1.00e-135	475.00
IUUC-Ggo-044916	Gorilla gorilla	98.33	8.00e-178	615.00
IUUC-Hsa-045865	Homo sapiens	100.00	1.00e-174	605.00
IUUC-Hvu-047188	Hordeum vulgare	78.32	6.00e-136	476.00
IUUC-Itr-048154	Ictidomys tridecemlineatus	98.88	6.00e-104	369.00
IUUC-Kpa-049128	Komagataella pastoris	73.31	1.00e-115	409.00
IUUC-Lch-050167	Latimeria chalumnae	90.61	8.00e-163	565.00
IUUC-Lpe-051086	Leersia perrieri	81.27	1.00e-135	475.00
IUUC-Loc-052888	Lepisosteus oculatus	98.63	1.00e-172	598.00
IUUC-Lma-052962	Leptosphaeria maculans	69.10	2.00e-120	425.00
IUUC-Laf-053949	Loxodonta africana	100.00	1.00e-174	605.00
IUUC-Mcc-055279	Macaca mulatta	97.90	5.00e-168	583.00
IUUC-Meu-055956	Macropus eugenii	91.16	6.00e-157	546.00
IUUC-Mor-057166	Magnaporthe oryzae	69.73	2.00e-112	399.00
IUUC-Mpo-057344	Magnaporthe poae	66.99	4.00e-121	427.00
IUUC-Mtr-057857	Medicago truncatula	82.88	1.00e-136	478.00
IUUC-Mla-058938	Melampsora laricipopulina	75.09	3.00e-132	464.00
IUUC-Mga-060093	Meleagris gallopavo	99.31	2.00e-173	600.00
IUUC-Mvi-060565	Microbotryum violaceum	72.82	3.00e-126	444.00
IUUC-Mmr-060899	Microcebus murinus	97.92	8.00e-168	582.00
IUUC-Mdo-062175	Monodelphis domestica	99.66	1.00e-173	601.00
IUUC-Mmu-063416	Mus musculus	100.00	1.00e-174	605.00
IUUC-Mac-065642	Musa acuminata	79.87	3.00e-135	474.00
IUUC-Mpu-065946	Mustela putorius furo	100.00	1.00e-174	605.00
IUUC-Mlu-067835	Myotis lucifugus	99.66	4.00e-177	613.00
IUUC-Nfi-068279	Neosartorya fischeri	70.98	1.00e-115	409.00
IUUC-Ncr-068821	Neurospora crassa	70.46	3.00e-109	387.00
IUUC-Nle-069212	Nomascus leucogenys	100.00	1.00e-174	605.00
IUUC-Opr-070928	Ochotona princeps	64.34	5.00e-82	297.00
IUUC-Ont-072135	Oreochromis niloticus	98.63	1.00e-172	598.00
IUUC-Oan-072755	Ornithorhynchus anatinus	99.66	1.00e-173	601.00
IUUC-Ocu-074433	Oryctolagus cuniculus	99.62	8.00e-159	552.00
IUUC-Oba-075678	Oryza barthii	81.27	7.00e-136	476.00
IUUC-Obr-076756	Oryza brachyantha	81.27	1.00e-135	475.00
IUUC-Ogl-077831	Oryza glaberrima	83.27	4.00e-130	457.00
IUUC-Ogu-078941	Oryza glumaepatula	81.27	7.00e-136	476.00
IUUC-Oin-080184	Oryza indica	81.27	7.00e-136	476.00
IUUC-Olo-080580	Oryza longistaminata	83.27	5.00e-130	456.00
IUUC-Ome-081739	Oryza meridionalis	80.69	9.00e-128	449.00
IUUC-Oni-082063	Oryza nivara	81.27	7.00e-136	476.00
IUUC-Opu-083207	Oryza punctata	81.27	1.00e-135	475.00
IUUC-Oru-085034	Oryza rufipogon	81.27	7.00e-136	476.00
IUUC-Osa-085486	Oryza sativa	81.27	7.00e-136	476.00
IUUC-Ola-087317	Oryzias latipes	98.63	1.00e-172	598.00
IUUC-Olu-087889	Ostreococcus lucimarinus	76.12	2.00e-131	461.00
IUUC-Oga-088032	Otolemur garnettii	98.67	2.00e-178	617.00
IUUC-Oar-090237	Ovis aries	100.00	4.00e-177	613.00
IUUC-Ptr-090881	Pan troglodytes	100.00	1.00e-174	605.00
IUUC-Pan-092658	Papio anubis	98.67	5.00e-178	616.00
IUUC-Psi-093672	Pelodiscus sinensis	99.66	1.00e-173	601.00
IUUC-Pma-094213	Petromyzon marinus	95.22	5.00e-168	583.00
IUUC-Pno-095038	Phaeosphaeria nodorum	69.10	3.00e-120	424.00
IUUC-Ppa-095467	Physcomitrella patens	84.59	1.00e-138	485.00
IUUC-Pfo-096322	Poecilia formosa	98.63	1.00e-172	598.00
IUUC-Pab-098484	Pongo abelii	100.00	1.00e-174	605.00
IUUC-Pop-099564	Populus trichocarpa	82.53	1.00e-135	475.00
IUUC-Pca-100785	Procavia capensis	93.21	7.00e-145	506.00
IUUC-Ppe-101727	Prunus persica	82.19	5.00e-135	473.00
IUUC-Pva-102569	Pteropus vampyrus	100.00	8.00e-177	612.00
IUUC-Pgr-103351	Puccinia graminis	74.39	1.00e-130	459.00
IUUC-Ptt-103763	Puccinia triticina	69.72	4.00e-117	414.00
IUUC-Pte-104088	Pyrenophora teres	69.44	3.00e-120	424.00
IUUC-Pyt-104597	Pyrenophora triticirepentis	70.19	7.00e-112	396.00
IUUC-Rno-105115	Rattus norvegicus	100.00	1.00e-174	605.00
IUUC-Sce-106353	Saccharomyces cerevisiae	67.59	3.00e-112	397.00
IUUC-Sha-107476	Sarcophilus harrisii	99.66	1.00e-173	601.00
IUUC-Sja-107807	Schizosaccharomyces japonicus	69.80	2.00e-124	438.00
IUUC-Spo-108255	Schizosaccharomyces pombe	69.13	1.00e-114	405.00
IUUC-Ssl-108392	Sclerotinia sclerotiorum	71.89	3.00e-111	394.00
IUUC-Smo-109413	Selaginella moellendorffii	82.53	2.00e-146	511.00
IUUC-Sit-110287	Setaria italica	81.27	9.00e-136	476.00
IUUC-Sly-111656	Solanum lycopersicum	81.85	2.00e-135	474.00
IUUC-Stu-112827	Solanum tuberosum	81.85	3.00e-135	474.00
IUUC-Sar-112979	Sorex araneus	83.84	5.00e-143	499.00
IUUC-Sbi-113841	Sorghum bicolor	81.27	1.00e-135	475.00
IUUC-Sre-114930	Sporisorium reilianum	77.06	2.00e-130	458.00
IUUC-Ssc-116058	Sus scrofa	100.00	3.00e-177	613.00
IUUC-Tgu-116499	Taeniopygia guttata	99.31	2.00e-173	600.00
IUUC-Tru-117576	Takifugu rubripes	98.63	1.00e-172	598.00
IUUC-Tsy-119371	Tarsius syrichta	91.58	7.00e-159	552.00
IUUC-Tni-120868	Tetraodon nigroviridis	98.28	2.00e-170	591.00
IUUC-Tca-121292	Theobroma cacao	82.53	1.00e-135	475.00
IUUC-Tre-122183	Trichoderma reesei	69.90	2.00e-115	408.00
IUUC-Tvi-122566	Trichoderma virens	69.90	1.00e-115	409.00
IUUC-Tae-125156	Triticum aestivum	78.32	2.00e-135	474.00
IUUC-Tur-126034	Triticum urartu	82.92	3.00e-130	457.00
IUUC-Tme-126903	Tuber melanosporum	68.18	5.00e-124	437.00
IUUC-Tbe-127525	Tupaia belangeri	91.11	9.00e-145	505.00
IUUC-Ttr-129072	Tursiops truncatus	100.00	6.00e-177	612.00
IUUC-Uma-129471	Ustilago maydis	77.42	5.00e-131	460.00
IUUC-Vda-129956	Verticillium dahliae	70.18	5.00e-110	390.00
IUUC-Vpa-130490	Vicugna pacos	100.00	6.00e-177	612.00
IUUC-Vvi-131302	Vitis vinifera	82.53	1.00e-135	475.00
IUUC-Xtr-132059	Xenopus tropicalis	98.97	7.00e-173	599.00
IUUC-Xma-133101	Xiphophorus maculatus	98.63	1.00e-172	598.00
IUUC-Yli-134638	Yarrowia lipolytica	71.02	5.00e-120	423.00
IUUC-Zma-135910	Zea mays	81.27	1.00e-135	475.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence