iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000010107.2	ENSCJAT00000019703.2	ENSCJAP00000018652.2
ENSCJAG00000010107.2	ENSCJAT00000055518.1	ENSCJAP00000042908.1
ENSCJAG00000010107.2	ENSCJAT00000019694.2	ENSCJAP00000018644.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-60	197.4	88	127
UBD/Beta-Prp	3.10e-133	444.5	41	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdD..gtikvWDlrtgvllk 37
           Ht +v claf sd  +l+s + D  +t+ +WD+r+g+ll 
   Q: 88   HTHGVACLAFdSDgQRLASVGLDakNTVCIWDWRKGKLLA 127
           99*********999*******9999***********9875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgs..rdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvht 89
            gh ++ i+ ++ +pdk+l+atg   +   i vwd  + ++++ l   h+ +v+++ f++dg+ l++++ D  +t+++wd ++gk + +
   Q: 41   LGHTDDIIS-LALHPDKTLVATGQvgKEPYICVWDSYNVQTVSILkDVHTHGVACLAFDSDGQRLASVGLDakNTVCIWDWRKGKLLAS 128
           466677777.999*********96115567***************777***************************************** PP
   S: 90   lkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrt 174
            +gh+d++ ++s++p++ +++vs   ++ i+ w l  +    +  ++ ++ ++ +++++ + + ++  sG+l++ + +W+    +l+rt
   Q: 129  ATGHSDRIFDISWDPYQpNRVVSC-GVKHIKFWTLCGNALTAKrgIFGKTGDLQTILCLACAKeDITYSGALNGDIYVWKG--LNLVRT 214
           ***************994555555.5*******99999999889976666666666666666669**************66..99**** PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
            +g+h   + s+ + ++g  +++g++dg ++lwd  
   Q: 215  IQGAHSAGIFSMYVCEEG--FATGGRDGCIRLWDTD 248
           ****************65..**************75 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

XVHPVCRKQT LYYTAGKEVV YFVAGVGVIY NTRENSQKFF LGHTDDIISL ALHPDKTLVA 60
TGQVGKEPYI CVWDSYNVQT VSILKDVHTH GVACLAFDSD GQRLASVGLD AKNTVCIWDW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NGGGTTCACC CAGTGTGCCG CAAACAAACC TTGTACTACC ACGGCCGGGC AAGGGAGGTG 60
GTTCTACCTT TGTGGCTGGG GTCGGGGTTG ATTTATAACA CCCGTGAGCA ACAGCCAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	97.57	0.00e+00	3796.00
IUUC-Apl-003604	Anas platyrhynchos	93.42	0.00e+00	3627.00
IUUC-Aca-004572	Anolis carolinensis	89.28	0.00e+00	3524.00
IUUC-Ame-010713	Astyanax mexicanus	80.01	0.00e+00	3161.00
IUUC-Bta-012812	Bos taurus	97.42	0.00e+00	3787.00
IUUC-Cfa-020041	Canis familiaris	97.46	0.00e+00	3516.00
IUUC-Csa-023689	Chlorocebus sabaeus	98.01	0.00e+00	3755.00
IUUC-Cho-025038	Choloepus hoffmanni	96.48	0.00e+00	1492.00
IUUC-Cin-025205	Ciona intestinalis	61.85	0.00e+00	2528.00
IUUC-Csv-026014	Ciona savignyi	63.08	0.00e+00	2545.00
IUUC-Dno-029982	Dasypus novemcinctus	95.44	0.00e+00	3664.00
IUUC-Eca-034161	Equus caballus	96.05	0.00e+00	3679.00
IUUC-Fca-036307	Felis catus	97.47	0.00e+00	3790.00
IUUC-Fal-037332	Ficedula albicollis	92.40	0.00e+00	3575.00
IUUC-Gmo-039057	Gadus morhua	74.50	0.00e+00	2934.00
IUUC-Gac-042555	Gasterosteus aculeatus	79.81	0.00e+00	3164.00
IUUC-Ggo-045107	Gorilla gorilla	98.66	0.00e+00	3826.00
IUUC-Hsa-046482	Homo sapiens	98.61	0.00e+00	3821.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	95.90	0.00e+00	3723.00
IUUC-Loc-052642	Lepisosteus oculatus	87.64	0.00e+00	3412.00
IUUC-Laf-053649	Loxodonta africana	96.54	0.00e+00	3682.00
IUUC-Mcc-055361	Macaca mulatta	98.89	0.00e+00	3408.00
IUUC-Meu-056618	Macropus eugenii	77.80	0.00e+00	1739.00
IUUC-Mga-059202	Meleagris gallopavo	92.83	0.00e+00	3574.00
IUUC-Mmr-060729	Microcebus murinus	95.76	0.00e+00	3774.00
IUUC-Mdo-062462	Monodelphis domestica	95.15	0.00e+00	3673.00
IUUC-Mmu-063865	Mus musculus	96.44	0.00e+00	3776.00
IUUC-Mpu-066724	Mustela putorius furo	97.68	0.00e+00	3796.00
IUUC-Mlu-067816	Myotis lucifugus	96.96	0.00e+00	3789.00
IUUC-Opr-070213	Ochotona princeps	94.35	0.00e+00	1999.00
IUUC-Ont-071928	Oreochromis niloticus	79.31	0.00e+00	3180.00
IUUC-Oan-073563	Ornithorhynchus anatinus	94.70	0.00e+00	3693.00
IUUC-Ocu-074531	Oryctolagus cuniculus	97.37	0.00e+00	3785.00
IUUC-Ola-086943	Oryzias latipes	78.65	0.00e+00	3132.00
IUUC-Olu-087860	Ostreococcus lucimarinus	38.84	5.00e-117	414.00
IUUC-Oga-088665	Otolemur garnettii	97.43	0.00e+00	3721.00
IUUC-Oar-090429	Ovis aries	97.57	0.00e+00	3793.00
IUUC-Ptr-091168	Pan troglodytes	89.14	0.00e+00	3389.00
IUUC-Pan-092788	Papio anubis	98.98	0.00e+00	3093.00
IUUC-Psi-093281	Pelodiscus sinensis	91.62	0.00e+00	3580.00
IUUC-Pma-094424	Petromyzon marinus	72.10	4.00e-124	436.00
IUUC-Pab-098561	Pongo abelii	97.46	0.00e+00	3298.00
IUUC-Pca-100177	Procavia capensis	85.86	0.00e+00	1540.00
IUUC-Rno-105002	Rattus norvegicus	95.61	0.00e+00	3763.00
IUUC-Sha-107105	Sarcophilus harrisii	92.47	0.00e+00	3551.00
IUUC-Ssc-116282	Sus scrofa	97.94	0.00e+00	3758.00
IUUC-Tgu-116807	Taeniopygia guttata	93.44	0.00e+00	3622.00
IUUC-Tru-118040	Takifugu rubripes	78.28	0.00e+00	3108.00
IUUC-Tni-120118	Tetraodon nigroviridis	75.87	0.00e+00	3082.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence