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Tag Content
UUCD2 ID IUUC-Aly-006012
UUCD1 version UUC-ArL-00002
Ensembl Protein ID fgenesh1_pg.C_scaffold_4000667
UniProt Accession D7LDI7; D7LDI7_ARALL
Genbank Protein ID EFH57057.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348716
Gene Name ARALYDRAFT_344325
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pg.C_scaffold_4000667 fgenesh1_pg.C_scaffold_4000667 fgenesh1_pg.C_scaffold_4000667
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-26 92.1 265 303
E3 adaptor/Cullin RING/APC_C/CDC20 3.80e-127 424.4 130 428
UBD/Beta-Prp 2.00e-43 149.4 273 426
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
    gHt +v++l++ s+ +l+sG++ +++ vWD +tg++l+
   Q: 265 GHTLEVCGLKWseSGQHLASGGNENVVNVWDCSTGRSLH 303
    8999*******97769*******************9886 PP
   


   E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeve 79
    e+ ldap++ ddfylnLldW+s nv+a+aLg+svylw+a++g+vs+l + e+ vts++w ++g lavG +++ev+
   Q: 130 ERALDAPDIVDDFYLNLLDWGSANVVAIALGRSVYLWDASSGSVSELVTVdEDMGPVTSINWAQDGLNLAVGLDNSEVQ 208
    588***********************************************777889*********************** PP
   S: 80 iyDveekkkvrtl.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGn 157
    ++D +++kvrtl +gh++rvg+L+Wn+++l++G+ dg+i +dvrv+ + ++t+++h+ evCGlkw+e++++LasGGn
   Q: 209 LWDSVASRKVRTLkDGHQSRVGSLAWNSHILTTGGMDGKIIDNDVRVRSHVVKTYRGHTLEVCGLKWSESGQHLASGGN 287
    *************99**************************************************************** PP
   S: 158 DnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskksk 236
    +n+v+vwd s+ + l++f+eh++avka+aw+P+q++lLa+GGG +Dr+ikfwnt tga+l+++dtgsqvcsl+ws+k++
   Q: 288 ENVVNVWDCSTGRSLHRFQEHTSAVKALAWCPFQSGLLATGGGGEDRTIKFWNTRTGACLNSVDTGSQVCSLIWSNKER 366
    ******************************************************************************* PP
   S: 237 elvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfd 298
    el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl+++ spdg ++++aagDetlr+w++f
   Q: 367 ELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLYMSQSPDGCTVASAAGDETLRLWNVFG 428
    ************************************************************96 PP
   


   UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsG..shdrtirvwdletgqcleetl 133
    +k+s++g+ l++g++ ++++vwd stg +h +++h++ v +l+++p ++ l++G ++drti+ w+++tg cl++++
   Q: 273 LKWSESGQHLASGGNENVVNVWDCSTGRSLHRFQEHTSAVKALAWCPfQSGLLATGggGEDRTIKFWNTRTGACLNSVD 351
    6788999999*************************************88899999722579**************9888 PP
   S: 134 sghdgvvncvvvhpdg.nllvs.GslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
    +g + v+++ ++ ++ ll s G++ +++ lW+ +++ + +l g ht++v +s +++g ++s++ d t++lw++
   Q: 352 TGSQ--VCSLIWSNKErELLSShGFTQNQLTLWKYPSMVKMAELNG-HTSRVLYMSQSPDGCTVASAAGDETLRLWNV 426
    8887..6666666655455544599999*******99999999999.*****************************97 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MDSGINTSSH FKPQARCPLQ RNFLPKKTSK ENPERFIPNR SAMDFDYAHF QLTEGRNVKD 60
EATKVSSSPS REAYRKQLAE TMNLNRTRIL AFRNKPQTPV QLLPREHSVY SLYQQPKSVK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006012|E3,WD_repeat;E3,CDC20;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGATTCAG GTATTAACAC TTCTTCACAC TTCAAACCTC AAGCTCGATG TCCACTTCAA 60
CGAAACTTCC TCCCCAAGAA AACTTCCAAA GAAAACGTAA GTGTTTTTTT GCTTATGAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006012|E3,WD_repeat;E3,CDC20;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG aly:ARALYDRAFT_344325
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Bta-012625 Bos taurus 48.28 3.00e-105 375.00
IUUC-Cja-019132 Callithrix jacchus 49.51 1.00e-107 382.00
IUUC-Cfa-020780 Canis familiaris 48.77 2.00e-106 378.00
IUUC-Cpo-022223 Cavia porcellus 49.02 6.00e-96 343.00
IUUC-Csa-023666 Chlorocebus sabaeus 49.26 9.00e-107 379.00
IUUC-Cne-026872 Cryptococcus neoformans 48.29 9.00e-85 306.00
IUUC-Dno-028865 Dasypus novemcinctus 48.05 2.00e-103 369.00
IUUC-Dor-030958 Dipodomys ordii 46.02 3.00e-101 361.00
IUUC-Dme-031905 Drosophila melanogaster 47.42 1.00e-110 392.00
IUUC-Ete-032387 Echinops telfairi 44.61 2.00e-94 339.00
IUUC-Eeu-035059 Erinaceus europaeus 43.41 1.00e-87 316.00
IUUC-Fca-036346 Felis catus 46.81 5.00e-92 330.00
IUUC-Fal-037558 Ficedula albicollis 47.68 4.00e-107 381.00
IUUC-Ggo-045052 Gorilla gorilla 49.02 1.00e-106 379.00
IUUC-Hsa-046305 Homo sapiens 49.02 1.00e-106 379.00
IUUC-Itr-048461 Ictidomys tridecemlineatus 49.02 7.00e-97 347.00
IUUC-Laf-053742 Loxodonta africana 49.02 2.00e-106 378.00
IUUC-Mcc-054948 Macaca mulatta 49.26 9.00e-107 379.00
IUUC-Nle-070149 Nomascus leucogenys 49.02 7.00e-105 373.00
IUUC-Ocu-073797 Oryctolagus cuniculus 49.02 6.00e-107 380.00
IUUC-Oga-088184 Otolemur garnettii 48.18 5.00e-103 367.00
IUUC-Ptr-090935 Pan troglodytes 48.54 1.00e-105 376.00
IUUC-Pan-091845 Papio anubis 49.26 9.00e-107 379.00
IUUC-Psi-093188 Pelodiscus sinensis 47.68 8.00e-107 380.00
IUUC-Pab-098603 Pongo abelii 49.26 8.00e-107 380.00
IUUC-Pca-101062 Procavia capensis 48.78 2.00e-106 378.00
IUUC-Pva-102925 Pteropus vampyrus 48.33 7.00e-108 383.00
IUUC-Rno-106005 Rattus norvegicus 47.02 4.00e-101 361.00
IUUC-Sar-113092 Sorex araneus 45.84 2.00e-96 345.00
IUUC-Ssc-115710 Sus scrofa 49.02 5.00e-106 377.00
IUUC-Tgu-117100 Taeniopygia guttata 47.92 7.00e-108 383.00
IUUC-Tbe-127384 Tupaia belangeri 52.41 5.00e-86 310.00
Created Date 25-Jun-2017

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