iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000018532.7	ENSRNOT00000025020.6	ENSRNOP00000025020.5
ENSRNOG00000018532.7	ENSRNOT00000092151.1	ENSRNOP00000074710.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/RAWUL	1.80e-28	99.3	139	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/RAWUL

   S: 1    islsLeplesnkakddsk...lkkkylrcsarltVkhlkkflaeklklsssyevdllcedevLednetLeeikyifiwk 76
           i+++L++l++ ++++d++   l+kk++rcs+r+tV+++kkfl++klkl+ssye+d+lc++e++++++t+e+i y+++w+
   Q: 139  IAICLDCLRNHGQSGDNVvkgLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFI-YMTRWR 216
           79**********************************************************************.*****9 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MATQRKHLVK DFNPYITCYI CKGYLIKPTT VTECLHTFCK TCIVQHFEDS NDCPRCGNQV 60
HETNPLEMLR LDNTLEEIIF KLVPGLREQE LQRELEFWKK NKPQENGQDE VSKVDKSKAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGCGGCTC GCGCCTCGCC ACCCGGTCCT GCTCCGCCCC GCCCGCTCGG GCTGCTCACC 60
TACCGCCCCA CGCGCGCGCG CTCGTGCACC ACGCGCCCCG TGCGGCCCGC CCGGAACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032443--RAWUL
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF16207--RAWUL

SMART

SM00184--RING

Gene Ontology

GO:0005813--C:centrosome
GO:0005730--C:nucleolus
GO:0031519--C:PcG protein complex
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002093	Ailuropoda melanoleuca	95.18	3.00e-118	417.00
IUUC-Apl-003757	Anas platyrhynchos	95.05	9.00e-110	389.00
IUUC-Aca-005032	Anolis carolinensis	88.29	5.00e-100	356.00
IUUC-Ame-011418	Astyanax mexicanus	75.11	6.00e-90	323.00
IUUC-Bta-013081	Bos taurus	96.00	4.00e-118	416.00
IUUC-Cja-019296	Callithrix jacchus	95.11	3.00e-116	410.00
IUUC-Cfa-020437	Canis familiaris	95.56	3.00e-118	417.00
IUUC-Cpo-022107	Cavia porcellus	96.04	4.00e-119	420.00
IUUC-Csa-023103	Chlorocebus sabaeus	95.56	7.00e-111	392.00
IUUC-Cho-025053	Choloepus hoffmanni	61.93	2.00e-55	208.00
IUUC-Dre-028306	Danio rerio	78.73	2.00e-89	321.00
IUUC-Dno-030077	Dasypus novemcinctus	96.44	9.00e-120	422.00
IUUC-Dor-030893	Dipodomys ordii	95.72	9.00e-96	342.00
IUUC-Ete-033131	Echinops telfairi	76.00	1.00e-85	309.00
IUUC-Eca-034226	Equus caballus	92.44	2.00e-114	404.00
IUUC-Eeu-034466	Erinaceus europaeus	77.33	1.00e-87	315.00
IUUC-Fca-035545	Felis catus	96.44	6.00e-120	422.00
IUUC-Fal-037615	Ficedula albicollis	95.05	9.00e-110	389.00
IUUC-Gmo-038871	Gadus morhua	71.82	2.00e-74	271.00
IUUC-Gga-040926	Gallus gallus	93.75	2.00e-109	388.00
IUUC-Gac-042006	Gasterosteus aculeatus	78.57	1.00e-90	325.00
IUUC-Ggo-045087	Gorilla gorilla	95.56	7.00e-111	392.00
IUUC-Hsa-046738	Homo sapiens	95.56	7.00e-111	392.00
IUUC-Itr-048443	Ictidomys tridecemlineatus	95.57	1.00e-77	281.00
IUUC-Lch-050434	Latimeria chalumnae	87.84	4.00e-103	367.00
IUUC-Loc-052649	Lepisosteus oculatus	82.74	2.00e-102	364.00
IUUC-Laf-053509	Loxodonta africana	96.44	9.00e-120	422.00
IUUC-Mcc-055709	Macaca mulatta	95.56	6.00e-111	393.00
IUUC-Meu-056663	Macropus eugenii	77.33	4.00e-88	317.00
IUUC-Mga-059573	Meleagris gallopavo	93.69	3.00e-108	384.00
IUUC-Mmr-060776	Microcebus murinus	96.00	1.00e-117	415.00
IUUC-Mdo-061959	Monodelphis domestica	95.56	2.00e-117	414.00
IUUC-Mmu-063483	Mus musculus	98.64	1.00e-113	402.00
IUUC-Mpu-066861	Mustela putorius furo	96.44	6.00e-120	422.00
IUUC-Mlu-067880	Myotis lucifugus	96.44	9.00e-120	422.00
IUUC-Nle-069264	Nomascus leucogenys	95.56	7.00e-111	392.00
IUUC-Opr-070746	Ochotona princeps	74.43	2.00e-71	261.00
IUUC-Ont-071361	Oreochromis niloticus	81.45	6.00e-96	343.00
IUUC-Oan-073482	Ornithorhynchus anatinus	75.20	9.00e-97	346.00
IUUC-Ocu-073885	Oryctolagus cuniculus	95.20	8.00e-120	422.00
IUUC-Ola-086999	Oryzias latipes	78.22	2.00e-94	338.00
IUUC-Oga-088504	Otolemur garnettii	95.56	3.00e-119	420.00
IUUC-Oar-089963	Ovis aries	96.44	4.00e-120	423.00
IUUC-Ptr-090820	Pan troglodytes	94.67	4.00e-110	390.00
IUUC-Pan-092600	Papio anubis	95.56	6.00e-111	393.00
IUUC-Psi-093699	Pelodiscus sinensis	95.05	2.00e-117	414.00
IUUC-Pma-094238	Petromyzon marinus	66.96	2.00e-81	295.00
IUUC-Pfo-096402	Poecilia formosa	78.03	1.00e-90	325.00
IUUC-Pab-097621	Pongo abelii	95.56	7.00e-111	392.00
IUUC-Pca-100342	Procavia capensis	95.11	1.00e-110	392.00
IUUC-Pva-103118	Pteropus vampyrus	96.44	4.00e-114	403.00
IUUC-Sha-107627	Sarcophilus harrisii	93.04	3.00e-74	270.00
IUUC-Sar-113005	Sorex araneus	81.33	5.00e-105	373.00
IUUC-Ssc-116448	Sus scrofa	81.28	2.00e-81	295.00
IUUC-Tgu-117081	Taeniopygia guttata	95.05	9.00e-110	389.00
IUUC-Tru-117696	Takifugu rubripes	74.89	4.00e-87	314.00
IUUC-Tsy-119052	Tarsius syrichta	78.07	3.00e-81	294.00
IUUC-Tni-120530	Tetraodon nigroviridis	76.32	8.00e-87	313.00
IUUC-Tbe-127914	Tupaia belangeri	76.44	2.00e-86	311.00
IUUC-Ttr-128739	Tursiops truncatus	79.56	1.00e-90	325.00
IUUC-Vpa-130189	Vicugna pacos	95.20	8.00e-120	422.00
IUUC-Xtr-131995	Xenopus tropicalis	84.30	1.00e-99	355.00
IUUC-Xma-133038	Xiphophorus maculatus	78.03	4.00e-90	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence