iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000009422.2	ENSORLT00000011813.1	ENSORLP00000011812.1
ENSORLG00000009422.2	ENSORLT00000011810.2	ENSORLP00000011809.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-28	96.9	172	202
UBD/Beta-Prp	5.00e-73	246.2	102	428

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d+vtclaf ++  +l+sGs+D t+k++D+
   Q: 172  HVDEVTCLAFhPTeQILASGSRDYTLKLFDY 202
           9**********77799**************7 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......................lrslsgheaevtavkfspdgkilvt 69
           ++ ++hk+++++ ++s+d++l+atgs+d++ik+ d++++ +                       +r+l++h +evt++ f+p+++il++
   Q: 102  CYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAksampievmmnetaqqnmenhpvIRTLYDHVDEVTCLAFHPTEQILAS 190
           67889*********************************988************************************************ PP
   S: 70   gseDrtikvwdlstgkcvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvs 154
           gs+D+t+k++d+s+++  +++k  ++ ++++s+sf+psgd+l++G+++ t+r++d++t qc+ +  +l++h++++++v+++p++n +vs
   Q: 191  GSRDYTLKLFDYSKPSAKRAFKyiQEAEMLRSISFHPSGDFLLVGTQHPTLRLYDVNTFQCFVScnPLDQHTDTISGVSYNPSANSYVS 279
           *****************99999999***************************************99*********************** PP
   S: 155  GslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs....pnderlv 238
           +s+D+ ++lWd  ++++++t++++h+++  + + f++n+k+++s ++d+ vklw+++tg+++++++g     ++++ +    +++e +v
   Q: 280  CSKDGSIKLWDGVSNRCVTTFEKAHDGAEVCSAiFSKNSKYVLSSGKDSVVKLWEISTGRTLVKYTGAGLSGRQMHRTqgvfNHTEDYV 368
           *********************9999998777666***********************************99999999988889****** PP
   S: 239  sgssDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
              ++++i++  Wd+r+ +  + l+l +++++ + v+s++++ ++++s+d ++++w  ++
   Q: 369  LLPDERTISLccWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRT 428
           ********9888********************************************9875 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MFRPKPTLKD RQQLYKLIIS QLLYDGYTSI ANSLINEVKP QNVVSPSEQL MQLAKIGMEN 60
DDSAVQYAIG RSDTVAPGVG IDMEFDADVQ TMSPEASEYE TCYVTSHKGP CRVATYSRDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTTTTGC GTCATGACGT AGCACGCAGA CTTGCTGCTG GGAGCCCTTG CATGGCGTGC 60
ATGTACTGCT GTAAAGTTAA AATTTATGTA AGTTTGGGGA CATAAACTCG TTGTTAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032028--CSTF1_dimer
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16699--CSTF1_dimer
PF00400--WD40

SMART

SM00320--WD40

KEGG

ola:101173931

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	91.65	0.00e+00	844.00
IUUC-Atr-002687	Amborella trichopoda	37.91	4.00e-66	245.00
IUUC-Apl-003438	Anas platyrhynchos	91.18	0.00e+00	842.00
IUUC-Aca-005178	Anolis carolinensis	91.88	0.00e+00	845.00
IUUC-Aly-005791	Arabidopsis lyrata	37.26	6.00e-79	287.00
IUUC-Ath-006689	Arabidopsis thaliana	37.97	9.00e-80	290.00
IUUC-Ame-011217	Astyanax mexicanus	95.42	5.00e-169	586.00
IUUC-Bta-012619	Bos taurus	91.88	0.00e+00	845.00
IUUC-Bdi-014515	Brachypodium distachyon	42.51	4.00e-77	281.00
IUUC-Bra-017450	Brassica rapa	37.38	3.00e-74	271.00
IUUC-Cel-018151	Caenorhabditis elegans	52.44	2.00e-133	468.00
IUUC-Cja-019304	Callithrix jacchus	91.42	0.00e+00	842.00
IUUC-Cfa-020208	Canis familiaris	91.65	0.00e+00	844.00
IUUC-Cpo-022245	Cavia porcellus	91.65	0.00e+00	844.00
IUUC-Csa-023066	Chlorocebus sabaeus	91.42	0.00e+00	842.00
IUUC-Cho-024770	Choloepus hoffmanni	94.12	0.00e+00	755.00
IUUC-Cin-025621	Ciona intestinalis	57.04	2.00e-150	525.00
IUUC-Csv-026071	Ciona savignyi	60.84	3.00e-161	561.00
IUUC-Dre-028254	Danio rerio	95.82	0.00e+00	879.00
IUUC-Dno-029903	Dasypus novemcinctus	91.65	0.00e+00	844.00
IUUC-Dor-030423	Dipodomys ordii	91.88	0.00e+00	845.00
IUUC-Dme-031993	Drosophila melanogaster	53.16	4.00e-129	454.00
IUUC-Ete-032689	Echinops telfairi	87.25	2.00e-73	269.00
IUUC-Eca-033316	Equus caballus	91.42	0.00e+00	843.00
IUUC-Eeu-035001	Erinaceus europaeus	88.17	0.00e+00	811.00
IUUC-Fca-036447	Felis catus	91.65	0.00e+00	844.00
IUUC-Fal-037601	Ficedula albicollis	91.18	0.00e+00	842.00
IUUC-Gmo-038531	Gadus morhua	94.69	0.00e+00	857.00
IUUC-Gga-040869	Gallus gallus	90.95	0.00e+00	840.00
IUUC-Gac-042380	Gasterosteus aculeatus	96.08	0.00e+00	875.00
IUUC-Gma-043478	Glycine max	38.33	1.00e-81	296.00
IUUC-Ggo-045302	Gorilla gorilla	91.42	0.00e+00	842.00
IUUC-Hsa-045678	Homo sapiens	91.42	0.00e+00	842.00
IUUC-Hvu-047301	Hordeum vulgare	42.43	5.00e-79	287.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	91.65	0.00e+00	844.00
IUUC-Lch-050319	Latimeria chalumnae	91.18	0.00e+00	844.00
IUUC-Lpe-051440	Leersia perrieri	40.45	7.00e-66	244.00
IUUC-Loc-052035	Lepisosteus oculatus	94.90	0.00e+00	872.00
IUUC-Laf-054275	Loxodonta africana	91.65	0.00e+00	844.00
IUUC-Mcc-055857	Macaca mulatta	78.19	0.00e+00	690.00
IUUC-Meu-056194	Macropus eugenii	98.73	7.00e-92	330.00
IUUC-Mtr-058667	Medicago truncatula	38.08	4.00e-75	275.00
IUUC-Mga-059710	Meleagris gallopavo	90.95	0.00e+00	840.00
IUUC-Mmr-060604	Microcebus murinus	91.65	0.00e+00	844.00
IUUC-Mdo-062953	Monodelphis domestica	91.65	0.00e+00	845.00
IUUC-Mmu-064292	Mus musculus	91.42	0.00e+00	844.00
IUUC-Mac-064568	Musa acuminata	42.73	2.00e-76	279.00
IUUC-Mpu-066294	Mustela putorius furo	60.99	3.00e-146	511.00
IUUC-Mlu-067995	Myotis lucifugus	90.72	0.00e+00	835.00
IUUC-Nle-069322	Nomascus leucogenys	91.42	0.00e+00	842.00
IUUC-Opr-070580	Ochotona princeps	92.11	0.00e+00	847.00
IUUC-Ont-072554	Oreochromis niloticus	98.61	0.00e+00	900.00
IUUC-Oan-072856	Ornithorhynchus anatinus	91.18	0.00e+00	842.00
IUUC-Ocu-074150	Oryctolagus cuniculus	79.95	0.00e+00	707.00
IUUC-Oba-075585	Oryza barthii	38.36	7.00e-68	251.00
IUUC-Obr-076069	Oryza brachyantha	40.65	7.00e-75	274.00
IUUC-Ogl-077045	Oryza glaberrima	42.73	8.00e-79	287.00
IUUC-Ogu-078697	Oryza glumaepatula	42.86	3.00e-74	273.00
IUUC-Oin-080119	Oryza indica	42.73	8.00e-79	287.00
IUUC-Olo-081093	Oryza longistaminata	32.62	1.00e-43	172.00
IUUC-Ome-081718	Oryza meridionalis	35.31	1.00e-55	211.00
IUUC-Oni-082072	Oryza nivara	38.36	7.00e-68	251.00
IUUC-Opu-084080	Oryza punctata	35.61	2.00e-56	213.00
IUUC-Oru-085070	Oryza rufipogon	39.83	1.00e-67	251.00
IUUC-Osa-086149	Oryza sativa	42.73	8.00e-79	287.00
IUUC-Oga-088697	Otolemur garnettii	91.65	0.00e+00	844.00
IUUC-Oar-089774	Ovis aries	91.65	0.00e+00	845.00
IUUC-Ptr-090924	Pan troglodytes	91.42	0.00e+00	842.00
IUUC-Pan-092373	Papio anubis	91.42	0.00e+00	842.00
IUUC-Psi-094001	Pelodiscus sinensis	91.18	0.00e+00	839.00
IUUC-Pma-094274	Petromyzon marinus	75.99	0.00e+00	712.00
IUUC-Ppa-095562	Physcomitrella patens	36.36	1.00e-78	286.00
IUUC-Pfo-097235	Poecilia formosa	96.75	0.00e+00	887.00
IUUC-Pab-098608	Pongo abelii	91.42	0.00e+00	842.00
IUUC-Pca-100268	Procavia capensis	91.88	0.00e+00	845.00
IUUC-Ppe-101425	Prunus persica	38.94	2.00e-80	292.00
IUUC-Pva-103183	Pteropus vampyrus	91.65	0.00e+00	844.00
IUUC-Rno-105097	Rattus norvegicus	91.42	0.00e+00	844.00
IUUC-Sha-107642	Sarcophilus harrisii	91.65	0.00e+00	845.00
IUUC-Smo-108680	Selaginella moellendorffii	36.36	1.00e-77	283.00
IUUC-Sit-110471	Setaria italica	41.41	3.00e-81	296.00
IUUC-Sly-111143	Solanum lycopersicum	33.47	2.00e-33	135.00
IUUC-Stu-111926	Solanum tuberosum	43.12	8.00e-32	129.00
IUUC-Sar-112947	Sorex araneus	93.75	3.00e-165	573.00
IUUC-Sbi-113769	Sorghum bicolor	43.32	6.00e-79	287.00
IUUC-Ssc-115736	Sus scrofa	91.65	0.00e+00	844.00
IUUC-Tgu-117457	Taeniopygia guttata	91.18	0.00e+00	842.00
IUUC-Tru-117760	Takifugu rubripes	96.06	0.00e+00	885.00
IUUC-Tsy-118943	Tarsius syrichta	90.72	0.00e+00	829.00
IUUC-Tni-120081	Tetraodon nigroviridis	96.52	0.00e+00	887.00
IUUC-Tca-121190	Theobroma cacao	40.89	3.00e-86	311.00
IUUC-Tae-125535	Triticum aestivum	43.62	6.00e-82	297.00
IUUC-Tur-126329	Triticum urartu	43.03	6.00e-81	295.00
IUUC-Tbe-127878	Tupaia belangeri	90.80	0.00e+00	822.00
IUUC-Ttr-128985	Tursiops truncatus	91.65	0.00e+00	844.00
IUUC-Vpa-130147	Vicugna pacos	91.42	0.00e+00	842.00
IUUC-Vvi-130935	Vitis vinifera	40.00	1.00e-84	307.00
IUUC-Xtr-132482	Xenopus tropicalis	90.49	0.00e+00	840.00
IUUC-Xma-133929	Xiphophorus maculatus	96.75	0.00e+00	887.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence