iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010244.1	ENSLACT00000011729.1	ENSLACP00000011640.1
ENSLACG00000010244.1	ENSLACT00000011730.1	ENSLACP00000011641.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-54	178.9	342	380
UBD/Beta-Prp	7.80e-66	222.5	157	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v+++++ ++  ll+s+sdD t+k+W+++++++++
   Q: 342  GHTNEVNAIKWdPSgMLLASCSDDMTLKIWSMKQDTCVH 380
           8**********9665889*****************9987 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvr 162
             +l+ghe++v  ++++p +d l+sGs d+t+r+w+l++++ +                + + ++ v+++ +++dg+ll++Gs+D++ r
   Q: 157  ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGPtqlvlrhcireggQDVPSNKDVTSLDWNSDGRLLATGSYDGFAR 245
           46789***********************************9998799***********89999999*********************** PP
   S: 163  lWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
           +W  + g+l  tl + h++++  l+++++g++++s++ d+t ++wd +tge  +++  h+++ ++v+   n++ ++s+s D  i +  l
   Q: 246  IW-TEDGNLASTLGQ-HKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 331
           **.89********76.**************************************************988.99***************** PP
   S: 252  rsgdllktlqlhn 264
            s+ ++kt+q+h 
   Q: 332  GSDRPVKTFQGHT 344
           ***********96 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSITSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GTLVPPAALI SILQKGLQYV 60
EAEISINEDG TVFDGRPIES LSLIDAVMPD VVQTRQQAFR EKLAQQQAAA ASAATQQNTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCTGAGG GTCGGAAACG AGCCTAAAGG AAAATCAGGG GACGTTTGGG GATTCAGCCA 60
CATTTTGCCC CAGGTAAGTA TTTGGTTAAT TTTAAATGTC TCGTGAGCTG TAATGGCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

lcm:102363322

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001450	Ailuropoda melanoleuca	94.30	0.00e+00	975.00
IUUC-Apl-003232	Anas platyrhynchos	93.12	0.00e+00	984.00
IUUC-Aca-005035	Anolis carolinensis	91.84	0.00e+00	978.00
IUUC-Ago-007869	Ashbya gossypii	25.40	9.00e-38	151.00
IUUC-Bta-013202	Bos taurus	92.61	0.00e+00	981.00
IUUC-Bdi-014315	Brachypodium distachyon	61.08	5.00e-134	471.00
IUUC-Cja-019281	Callithrix jacchus	90.33	0.00e+00	951.00
IUUC-Cfa-020929	Canis familiaris	91.83	0.00e+00	976.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	60.93	6.00e-131	460.00
IUUC-Csa-023943	Chlorocebus sabaeus	90.60	0.00e+00	959.00
IUUC-Cin-025704	Ciona intestinalis	72.12	0.00e+00	786.00
IUUC-Csv-026257	Ciona savignyi	70.60	0.00e+00	762.00
IUUC-Cne-026946	Cryptococcus neoformans	37.56	4.00e-30	126.00
IUUC-Cme-027258	Cyanidioschyzon merolae	40.53	2.00e-106	379.00
IUUC-Dno-028926	Dasypus novemcinctus	91.08	0.00e+00	970.00
IUUC-Dme-031939	Drosophila melanogaster	80.60	9.00e-174	603.00
IUUC-Ete-032822	Echinops telfairi	82.43	0.00e+00	827.00
IUUC-Eca-033897	Equus caballus	92.40	0.00e+00	981.00
IUUC-Fca-036462	Felis catus	91.84	0.00e+00	977.00
IUUC-Fal-037388	Ficedula albicollis	93.50	0.00e+00	987.00
IUUC-Gga-040671	Gallus gallus	93.50	0.00e+00	987.00
IUUC-Gac-041851	Gasterosteus aculeatus	91.62	0.00e+00	938.00
IUUC-Gma-044208	Glycine max	48.16	6.00e-151	527.00
IUUC-Ggo-045373	Gorilla gorilla	90.13	0.00e+00	961.00
IUUC-Hsa-045841	Homo sapiens	90.30	0.00e+00	962.00
IUUC-Itr-048236	Ictidomys tridecemlineatus	95.70	0.00e+00	750.00
IUUC-Laf-054071	Loxodonta africana	91.49	0.00e+00	976.00
IUUC-Mcc-055233	Macaca mulatta	90.80	0.00e+00	945.00
IUUC-Mga-059895	Meleagris gallopavo	93.32	0.00e+00	986.00
IUUC-Mvi-060557	Microbotryum violaceum	36.77	2.00e-69	257.00
IUUC-Mmr-061286	Microcebus murinus	91.89	0.00e+00	981.00
IUUC-Mmu-063447	Mus musculus	92.03	0.00e+00	979.00
IUUC-Nle-069151	Nomascus leucogenys	90.27	0.00e+00	956.00
IUUC-Ont-072252	Oreochromis niloticus	91.23	0.00e+00	959.00
IUUC-Oan-073562	Ornithorhynchus anatinus	92.03	0.00e+00	981.00
IUUC-Olu-087589	Ostreococcus lucimarinus	53.12	2.00e-156	545.00
IUUC-Oar-089506	Ovis aries	95.48	0.00e+00	989.00
IUUC-Pan-091909	Papio anubis	90.86	0.00e+00	960.00
IUUC-Psi-093358	Pelodiscus sinensis	91.05	0.00e+00	940.00
IUUC-Ppa-095868	Physcomitrella patens	65.19	3.00e-138	485.00
IUUC-Pfo-097214	Poecilia formosa	89.67	0.00e+00	926.00
IUUC-Pab-098317	Pongo abelii	90.12	0.00e+00	938.00
IUUC-Rno-105857	Rattus norvegicus	92.03	0.00e+00	979.00
IUUC-Sha-107326	Sarcophilus harrisii	94.53	0.00e+00	988.00
IUUC-Sly-111042	Solanum lycopersicum	51.96	2.00e-151	528.00
IUUC-Stu-112786	Solanum tuberosum	49.13	3.00e-142	498.00
IUUC-Ssc-115646	Sus scrofa	92.06	0.00e+00	981.00
IUUC-Tgu-116898	Taeniopygia guttata	93.31	0.00e+00	986.00
IUUC-Tru-117862	Takifugu rubripes	92.20	0.00e+00	954.00
IUUC-Tni-119656	Tetraodon nigroviridis	92.59	0.00e+00	949.00
IUUC-Ttr-128826	Tursiops truncatus	91.89	0.00e+00	895.00
IUUC-Uma-129469	Ustilago maydis	43.46	1.00e-59	224.00
IUUC-Vvi-131193	Vitis vinifera	56.54	8.00e-129	454.00
IUUC-Xma-133591	Xiphophorus maculatus	89.86	0.00e+00	926.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence