iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129944

Ensembl Protein ID

EGY18116

UniProt Accession

G2XE68; G2XE68_VERDV

Genbank Protein ID

EGY18116.1

Protein Name

Elongator complex protein

Genbank Nucleotide ID

DS572714

Gene Name

VDAG_08450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_08450	EGY18116	EGY18116

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-40	132.9	210	252
UBD/Beta-Prp	1.10e-41	142.0	29	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sdtllvsGsdDgtikvWDlrtgvl 35
           gH++++++l+f        sd ll+s+s D+ +++W+l++g  
   Q: 210  GHEGWIRSLDFtwessaadSDLLLASASQDKYVRLWRLHQGSE 252
           8********9999****9777999**************99975 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk....ilvtgseDrtikvwdls....tgkcvhtlkghedsvlslsfsp....sg.dk 108
           +la g +++ i +w  +  +       lsgh+++v+avkf p ++    ++++gs+D+t+k+w+l+    tg+cv+tl+ h++ + ++++ +    s+   
   Q: 29   VLAFG-ANSNICLWTPSASSHvgiAGILSGHKDAVKAVKFLPPTEggneVIISGSDDKTLKLWELNadhaTGQCVQTLTDHTAPINTIAILKsrnpSTpTL 128
           34444.47777777777766677667789999999999998877777789999999999999955555559999999999999999999888777756578 PP
   S: 109  lvsGshdrtirvwdletgqclee.......................................................tlsghdgvvncvvvh.....pdg 149
           +++G +d t rvw+ e g  l                                                         tl+gh+g+++++ +       d+
   Q: 129  IATGAADATFRVWKYEAGRLLLLstikptpkffpltlalstldhgddvvvlavagtrdiiqihvaantaasldfqlqaTLTGHEGWIRSLDFTwessaADS 229
           88999999999999999998877788888877777777777777777777777777777777777777777777777777777777777765411111223 PP
   S: 150  .nllvsGslDrtvrlWdl...............................ktgkllrtl........tgghtdsvyslsfdsng...........kelvsgs 199
             ll+s+s D+ vrlW+l                               + +++ + +         g h+d +ys ++ ++             +l+s s
   Q: 230  dLLLASASQDKYVRLWRLhqgselpamtsnadpatsaflpgkspankahRLQSCDKVFsitfeallLG-HEDWIYSAKWFRSEteqggggtnrpLQLLSTS 329
           34677777777777777777777777777777777777777766666665555555556666666555.77777777733333355666666666667777 PP
   S: 200  ldgtvklwd 208
            d+++ +w+
   Q: 330  ADNSLAIWE 338
           777777765 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MPDLQATAEY LSTGANRHTA VADWSQSGVL AFGANSNICL WTPSASSHVG IAGILSGHKD 60
AVKAVKFLPP TEGGNEVIIS GSDDKTLKLW ELNADHATGQ CVQTLTDHTA PINTIAILKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGATC TCCAAGCAAC GGCCGAGTAT CTCTCTACCG GTGCTAATAG GCACACTGCC 60
GTCGCCGACT GGAGCCAGTC TGGTGTGCTT GCCTTTGGTG CCAACTCCAA CATCTGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

KEGG

vda:VDAG_08450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	30.51	6.00e-85	306.00
IUUC-Aml-002049	Ailuropoda melanoleuca	32.52	7.00e-76	276.00
IUUC-Atr-002456	Amborella trichopoda	33.22	3.00e-98	351.00
IUUC-Apl-004053	Anas platyrhynchos	31.25	2.00e-103	368.00
IUUC-Aca-004535	Anolis carolinensis	28.93	4.00e-92	331.00
IUUC-Aly-005746	Arabidopsis lyrata	31.07	3.00e-96	344.00
IUUC-Ath-006664	Arabidopsis thaliana	31.00	6.00e-94	337.00
IUUC-Ago-007971	Ashbya gossypii	39.40	2.00e-139	487.00
IUUC-Acl-008173	Aspergillus clavatus	47.59	0.00e+00	707.00
IUUC-Afl-008665	Aspergillus flavus	43.20	7.00e-99	352.00
IUUC-Afu-008976	Aspergillus fumigatus	48.03	0.00e+00	696.00
IUUC-Ani-009284	Aspergillus nidulans	46.92	0.00e+00	676.00
IUUC-Ang-009809	Aspergillus niger	48.67	0.00e+00	705.00
IUUC-Aor-009959	Aspergillus oryzae	47.72	0.00e+00	697.00
IUUC-Ate-010442	Aspergillus terreus	48.38	0.00e+00	710.00
IUUC-Ame-011409	Astyanax mexicanus	31.55	2.00e-100	358.00
IUUC-Bgr-012137	Blumeria graminis	49.82	0.00e+00	721.00
IUUC-Bta-012892	Bos taurus	31.81	8.00e-102	363.00
IUUC-Bci-013944	Botrytis cinerea	52.56	0.00e+00	746.00
IUUC-Bdi-014512	Brachypodium distachyon	30.23	5.00e-86	310.00
IUUC-Bol-015741	Brassica oleracea	31.54	4.00e-103	367.00
IUUC-Bra-017367	Brassica rapa	31.81	8.00e-103	366.00
IUUC-Cel-018712	Caenorhabditis elegans	27.01	5.00e-65	240.00
IUUC-Cja-018865	Callithrix jacchus	28.51	3.00e-88	317.00
IUUC-Cfa-021006	Canis familiaris	31.07	3.00e-101	361.00
IUUC-Cpo-021370	Cavia porcellus	30.37	2.00e-98	351.00
IUUC-Csa-023845	Chlorocebus sabaeus	31.33	2.00e-100	358.00
IUUC-Cho-024640	Choloepus hoffmanni	31.01	3.00e-61	228.00
IUUC-Cin-025772	Ciona intestinalis	30.47	2.00e-88	318.00
IUUC-Csv-025891	Ciona savignyi	29.67	4.00e-94	337.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	62.16	0.00e+00	970.00
IUUC-Cne-027081	Cryptococcus neoformans	35.54	2.00e-98	351.00
IUUC-Cme-027225	Cyanidioschyzon merolae	26.24	2.00e-30	125.00
IUUC-Dre-028250	Danio rerio	32.28	3.00e-99	354.00
IUUC-Dno-028847	Dasypus novemcinctus	31.40	7.00e-101	359.00
IUUC-Dor-030351	Dipodomys ordii	30.48	2.00e-96	345.00
IUUC-Dse-031317	Dothistroma septosporum	47.84	0.00e+00	664.00
IUUC-Dme-032019	Drosophila melanogaster	32.94	9.00e-109	385.00
IUUC-Ete-033194	Echinops telfairi	30.80	6.00e-55	207.00
IUUC-Eca-033779	Equus caballus	31.78	2.00e-101	361.00
IUUC-Eeu-034790	Erinaceus europaeus	30.68	5.00e-49	187.00
IUUC-Fca-036090	Felis catus	32.45	4.00e-98	350.00
IUUC-Fal-037663	Ficedula albicollis	29.21	1.00e-91	328.00
IUUC-Fox-037828	Fusarium oxysporum	60.64	0.00e+00	919.00
IUUC-Fso-038462	Fusarium solani	63.05	0.00e+00	917.00
IUUC-Gmo-039450	Gadus morhua	33.46	9.00e-110	389.00
IUUC-Ggr-040023	Gaeumannomyces graminis	52.49	0.00e+00	817.00
IUUC-Gga-040480	Gallus gallus	31.45	1.00e-109	389.00
IUUC-Gac-041544	Gasterosteus aculeatus	32.57	8.00e-101	359.00
IUUC-Gma-044048	Glycine max	31.52	6.00e-104	370.00
IUUC-Ggo-045381	Gorilla gorilla	29.72	3.00e-92	331.00
IUUC-Hsa-046096	Homo sapiens	29.81	9.00e-88	316.00
IUUC-Hvu-047494	Hordeum vulgare	30.65	2.00e-93	335.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	28.00	7.00e-76	276.00
IUUC-Kpa-049241	Komagataella pastoris	34.74	4.00e-121	427.00
IUUC-Lch-050512	Latimeria chalumnae	33.15	8.00e-95	340.00
IUUC-Lpe-051448	Leersia perrieri	30.47	2.00e-93	335.00
IUUC-Loc-051882	Lepisosteus oculatus	32.47	8.00e-112	396.00
IUUC-Lma-053023	Leptosphaeria maculans	48.45	0.00e+00	703.00
IUUC-Laf-054519	Loxodonta africana	30.80	2.00e-98	352.00
IUUC-Mcc-055580	Macaca mulatta	29.39	4.00e-93	334.00
IUUC-Meu-056606	Macropus eugenii	32.58	4.00e-28	118.00
IUUC-Mor-057109	Magnaporthe oryzae	53.51	0.00e+00	860.00
IUUC-Mpo-057297	Magnaporthe poae	53.15	0.00e+00	832.00
IUUC-Mtr-058348	Medicago truncatula	31.70	4.00e-104	370.00
IUUC-Mla-059159	Melampsora laricipopulina	29.21	1.00e-79	289.00
IUUC-Mga-059778	Meleagris gallopavo	30.19	1.00e-65	242.00
IUUC-Mvi-060447	Microbotryum violaceum	32.40	6.00e-93	333.00
IUUC-Mmr-061139	Microcebus murinus	30.08	2.00e-88	318.00
IUUC-Mdo-061866	Monodelphis domestica	31.28	2.00e-105	375.00
IUUC-Mmu-063390	Mus musculus	31.21	6.00e-97	347.00
IUUC-Mac-064693	Musa acuminata	32.44	1.00e-104	372.00
IUUC-Mpu-066547	Mustela putorius furo	31.23	7.00e-96	343.00
IUUC-Mlu-067156	Myotis lucifugus	31.39	3.00e-101	361.00
IUUC-Nfi-068616	Neosartorya fischeri	48.38	0.00e+00	705.00
IUUC-Ncr-068915	Neurospora crassa	51.82	0.00e+00	804.00
IUUC-Nle-069958	Nomascus leucogenys	31.44	2.00e-97	348.00
IUUC-Opr-071093	Ochotona princeps	28.79	6.00e-40	157.00
IUUC-Ont-072178	Oreochromis niloticus	31.84	2.00e-102	364.00
IUUC-Oan-073667	Ornithorhynchus anatinus	32.29	8.00e-104	369.00
IUUC-Ocu-074662	Oryctolagus cuniculus	31.48	5.00e-98	350.00
IUUC-Oba-075577	Oryza barthii	30.37	1.00e-97	349.00
IUUC-Obr-076566	Oryza brachyantha	31.18	9.00e-100	356.00
IUUC-Ogl-077054	Oryza glaberrima	30.46	5.00e-97	347.00
IUUC-Ogu-078846	Oryza glumaepatula	30.14	3.00e-95	341.00
IUUC-Oin-079084	Oryza indica	30.37	8.00e-98	349.00
IUUC-Olo-080933	Oryza longistaminata	29.15	4.00e-80	290.00
IUUC-Ome-081500	Oryza meridionalis	28.87	8.00e-84	303.00
IUUC-Oni-082352	Oryza nivara	30.14	3.00e-96	344.00
IUUC-Opu-084116	Oryza punctata	30.26	1.00e-95	342.00
IUUC-Oru-085249	Oryza rufipogon	30.37	8.00e-98	349.00
IUUC-Osa-086270	Oryza sativa	30.37	8.00e-98	349.00
IUUC-Ola-086625	Oryzias latipes	29.40	3.00e-75	275.00
IUUC-Olu-087638	Ostreococcus lucimarinus	29.94	3.00e-61	228.00
IUUC-Oga-088634	Otolemur garnettii	29.47	4.00e-80	291.00
IUUC-Oar-089475	Ovis aries	31.46	1.00e-100	359.00
IUUC-Ptr-091131	Pan troglodytes	31.10	1.00e-100	358.00
IUUC-Pan-092869	Papio anubis	31.65	1.00e-101	362.00
IUUC-Psi-093146	Pelodiscus sinensis	32.26	2.00e-92	331.00
IUUC-Pma-094479	Petromyzon marinus	31.72	3.00e-88	318.00
IUUC-Pno-095061	Phaeosphaeria nodorum	47.95	7.00e-155	539.00
IUUC-Ppa-095618	Physcomitrella patens	29.95	4.00e-85	308.00
IUUC-Pfo-096816	Poecilia formosa	31.80	2.00e-101	362.00
IUUC-Pab-097548	Pongo abelii	31.25	7.00e-102	363.00
IUUC-Pop-099643	Populus trichocarpa	32.51	6.00e-99	353.00
IUUC-Pca-100983	Procavia capensis	28.92	4.00e-41	161.00
IUUC-Ppe-101301	Prunus persica	31.89	3.00e-98	351.00
IUUC-Pva-102460	Pteropus vampyrus	31.13	2.00e-97	348.00
IUUC-Pgr-103507	Puccinia graminis	29.92	2.00e-82	298.00
IUUC-Ptt-103892	Puccinia triticina	30.49	2.00e-71	262.00
IUUC-Pte-104283	Pyrenophora teres	47.31	0.00e+00	700.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	46.52	0.00e+00	664.00
IUUC-Rno-105842	Rattus norvegicus	31.53	1.00e-96	346.00
IUUC-Sce-106459	Saccharomyces cerevisiae	37.82	5.00e-134	469.00
IUUC-Sha-106586	Sarcophilus harrisii	25.82	3.00e-69	255.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	38.35	3.00e-118	417.00
IUUC-Spo-108302	Schizosaccharomyces pombe	37.64	1.00e-123	435.00
IUUC-Smo-108919	Selaginella moellendorffii	30.92	1.00e-95	342.00
IUUC-Sit-109915	Setaria italica	30.36	2.00e-93	335.00
IUUC-Sly-111714	Solanum lycopersicum	31.96	5.00e-101	360.00
IUUC-Stu-112631	Solanum tuberosum	31.81	8.00e-101	359.00
IUUC-Sar-113200	Sorex araneus	30.20	6.00e-58	217.00
IUUC-Sbi-114582	Sorghum bicolor	31.00	4.00e-92	330.00
IUUC-Sre-115001	Sporisorium reilianum	26.24	2.00e-46	179.00
IUUC-Ssc-115519	Sus scrofa	30.85	2.00e-98	352.00
IUUC-Tgu-116987	Taeniopygia guttata	30.10	3.00e-96	344.00
IUUC-Tru-118476	Takifugu rubripes	32.88	2.00e-95	342.00
IUUC-Tsy-119230	Tarsius syrichta	42.54	2.00e-25	109.00
IUUC-Tni-120448	Tetraodon nigroviridis	28.74	2.00e-32	132.00
IUUC-Tca-121650	Theobroma cacao	32.52	9.00e-101	359.00
IUUC-Tre-122086	Trichoderma reesei	62.09	0.00e+00	883.00
IUUC-Tvi-122397	Trichoderma virens	62.05	0.00e+00	870.00
IUUC-Tae-123972	Triticum aestivum	30.63	7.00e-92	330.00
IUUC-Tur-126578	Triticum urartu	30.53	3.00e-91	328.00
IUUC-Tme-126927	Tuber melanosporum	44.22	7.00e-163	565.00
IUUC-Tbe-127922	Tupaia belangeri	42.11	4.00e-44	171.00
IUUC-Ttr-128918	Tursiops truncatus	31.52	2.00e-100	358.00
IUUC-Uma-129474	Ustilago maydis	26.68	6.00e-46	178.00
IUUC-Vpa-130693	Vicugna pacos	33.47	4.00e-96	343.00
IUUC-Vvi-130949	Vitis vinifera	32.91	3.00e-101	361.00
IUUC-Xtr-132639	Xenopus tropicalis	30.23	4.00e-86	310.00
IUUC-Xma-134223	Xiphophorus maculatus	35.76	1.00e-66	245.00
IUUC-Yli-134601	Yarrowia lipolytica	39.38	1.00e-136	478.00
IUUC-Zma-135952	Zea mays	30.79	3.00e-96	344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence