iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011966	Zm00001d011966_T003	Zm00001d011966_T003
Zm00001d011966	Zm00001d011966_T005	Zm00001d011966_T005
Zm00001d011966	Zm00001d011966_T002	Zm00001d011966_T002
Zm00001d011966	Zm00001d011966_T004	Zm00001d011966_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.00e-39	137.5	6	139
UBD/Alpha-Helix/UBA	5.90e-07	31.4	170	206

Active Site

Position(s)	Description	Evidence
89	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp.egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilke 88
           R++kel+e ++d   +g+s+ ++d +++ ++  +i Gp+d+pYegg+F ++i++p  YPf+PPk++f+tk++hPn++++ G++Cl+ilk 
   Q: 6    RVQKELTECNRDREvSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQnGAICLDILK- 94
           89*******8876449*************************************************************999********9. PP
   S: 89   eekWspalsvesvllsiqsllaepnpesplneeaaellkknreeyk 134
            ++Wspal++++ lls+q+ll++p p++p+++ +a+++ + +  yk
   Q: 95   -DQWSPALTLKTALLSLQALLSSPAPDDPQDAVVAQQMLDGKIGYK 139
           .**********************************99998887776 PP

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+k+++lveMGF++++++ aL + +++ ++A+e L +
   Q: 170  EEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCS 206
           79******************************98866 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVDVSRVQKE LTECNRDREV SGVSIALHDG ANISHLTGTI AGPADSPYEG GTFVIDIRLP 60
GGYPFEPPKM QFITKVWHPN ISSQNGAICL DILKDQWSPA LTLKTALLSL QALLSSPAPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAGACGG AAGTAACTGC CGCATCTCAA GTCTCAACCC TCGCCTCCAA TCGCAACGCT 60
CCCGAGGAGA GCCAGGAGGA GGTGACGGCG GCGCCGCGAG GAAGGAGGGA TCGATCGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50030--UBA
PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00627--UBA
PF00179--UQ_con

SMART

SM00165--UBA

Gene Ontology

GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000621	Aegilops tauschii	78.41	2.00e-77	280.00
IUUC-Aml-001286	Ailuropoda melanoleuca	47.14	7.00e-42	162.00
IUUC-Atr-003063	Amborella trichopoda	76.10	3.00e-75	273.00
IUUC-Apl-004122	Anas platyrhynchos	51.12	3.00e-39	154.00
IUUC-Aca-004565	Anolis carolinensis	50.00	2.00e-39	154.00
IUUC-Aly-006390	Arabidopsis lyrata	65.70	5.00e-71	259.00
IUUC-Ath-006637	Arabidopsis thaliana	65.07	9.00e-72	262.00
IUUC-Ago-007714	Ashbya gossypii	45.98	4.00e-42	163.00
IUUC-Acl-008189	Aspergillus clavatus	55.12	5.00e-24	103.00
IUUC-Afl-008489	Aspergillus flavus	40.87	1.00e-26	112.00
IUUC-Afu-008850	Aspergillus fumigatus	41.29	2.00e-27	115.00
IUUC-Ani-009361	Aspergillus nidulans	54.26	3.00e-26	110.00
IUUC-Ang-009548	Aspergillus niger	42.31	2.00e-27	114.00
IUUC-Aor-010105	Aspergillus oryzae	40.87	1.00e-26	112.00
IUUC-Ate-010389	Aspergillus terreus	55.91	5.00e-28	117.00
IUUC-Ame-011454	Astyanax mexicanus	47.62	3.00e-42	164.00
IUUC-Bgr-012255	Blumeria graminis	40.55	3.00e-33	134.00
IUUC-Bta-012992	Bos taurus	47.14	7.00e-42	162.00
IUUC-Bci-013806	Botrytis cinerea	40.00	1.00e-32	132.00
IUUC-Bdi-015024	Brachypodium distachyon	85.51	2.00e-85	307.00
IUUC-Bol-015985	Brassica oleracea	64.25	2.00e-70	258.00
IUUC-Bra-016805	Brassica rapa	64.25	2.00e-70	258.00
IUUC-Cel-018353	Caenorhabditis elegans	45.50	4.00e-42	163.00
IUUC-Cja-019051	Callithrix jacchus	47.14	7.00e-42	162.00
IUUC-Cfa-020016	Canis familiaris	47.14	7.00e-42	162.00
IUUC-Cpo-022026	Cavia porcellus	47.14	7.00e-42	162.00
IUUC-Cre-022987	Chlamydomonas reinhardtii	60.98	1.00e-52	198.00
IUUC-Csa-023059	Chlorocebus sabaeus	47.14	7.00e-42	162.00
IUUC-Cho-024276	Choloepus hoffmanni	47.17	3.00e-28	116.00
IUUC-Cin-025598	Ciona intestinalis	49.23	5.00e-36	143.00
IUUC-Csv-025831	Ciona savignyi	46.91	1.00e-34	138.00
IUUC-Cgl-026449	Colletotrichum gloeosporioides	52.34	2.00e-31	128.00
IUUC-Cne-027068	Cryptococcus neoformans	46.83	4.00e-44	170.00
IUUC-Dre-028139	Danio rerio	47.62	3.00e-42	164.00
IUUC-Dno-029169	Dasypus novemcinctus	46.15	1.00e-39	155.00
IUUC-Dse-031335	Dothistroma septosporum	53.24	5.00e-34	137.00
IUUC-Dme-032003	Drosophila melanogaster	47.83	1.00e-43	168.00
IUUC-Ete-032868	Echinops telfairi	39.05	5.00e-27	113.00
IUUC-Eca-033428	Equus caballus	47.14	7.00e-42	162.00
IUUC-Fca-035366	Felis catus	47.14	7.00e-42	162.00
IUUC-Fal-037016	Ficedula albicollis	47.14	7.00e-42	162.00
IUUC-Fso-038296	Fusarium solani	39.91	9.00e-33	132.00
IUUC-Gmo-039135	Gadus morhua	47.62	2.00e-42	164.00
IUUC-Ggr-039768	Gaeumannomyces graminis	38.01	1.00e-24	105.00
IUUC-Gga-041018	Gallus gallus	47.14	9.00e-42	162.00
IUUC-Gac-041503	Gasterosteus aculeatus	47.62	2.00e-42	164.00
IUUC-Gma-042779	Glycine max	69.12	1.00e-73	268.00
IUUC-Ggo-045032	Gorilla gorilla	47.14	7.00e-42	162.00
IUUC-Hsa-046490	Homo sapiens	47.14	7.00e-42	162.00
IUUC-Hvu-047691	Hordeum vulgare	69.71	7.00e-38	149.00
IUUC-Itr-048373	Ictidomys tridecemlineatus	47.14	7.00e-42	162.00
IUUC-Kpa-049297	Komagataella pastoris	48.77	1.00e-34	139.00
IUUC-Lch-050588	Latimeria chalumnae	51.32	2.00e-35	141.00
IUUC-Lpe-051070	Leersia perrieri	87.02	8.00e-82	295.00
IUUC-Loc-052549	Lepisosteus oculatus	47.62	6.00e-42	162.00
IUUC-Laf-053688	Loxodonta africana	46.92	8.00e-40	155.00
IUUC-Mcc-055606	Macaca mulatta	47.14	7.00e-42	162.00
IUUC-Mor-056946	Magnaporthe oryzae	39.72	4.00e-26	110.00
IUUC-Mpo-057441	Magnaporthe poae	37.56	8.00e-25	106.00
IUUC-Mtr-058002	Medicago truncatula	69.12	8.00e-74	269.00
IUUC-Mla-059007	Melampsora laricipopulina	49.75	3.00e-43	167.00
IUUC-Mga-059254	Meleagris gallopavo	51.12	2.00e-39	154.00
IUUC-Mvi-060346	Microbotryum violaceum	39.47	1.00e-36	145.00
IUUC-Mmr-061211	Microcebus murinus	47.14	7.00e-42	162.00
IUUC-Mdo-062458	Monodelphis domestica	46.67	8.00e-40	155.00
IUUC-Mmu-063648	Mus musculus	47.14	7.00e-42	162.00
IUUC-Mac-065447	Musa acuminata	77.29	2.00e-81	294.00
IUUC-Mpu-066407	Mustela putorius furo	47.14	2.00e-41	161.00
IUUC-Mlu-067682	Myotis lucifugus	47.98	1.00e-39	155.00
IUUC-Nfi-068517	Neosartorya fischeri	41.29	1.00e-27	115.00
IUUC-Ncr-068749	Neurospora crassa	43.90	6.00e-38	150.00
IUUC-Nle-069712	Nomascus leucogenys	51.12	3.00e-39	154.00
IUUC-Opr-070651	Ochotona princeps	47.14	7.00e-42	162.00
IUUC-Ont-071595	Oreochromis niloticus	47.62	2.00e-42	164.00
IUUC-Oan-073058	Ornithorhynchus anatinus	50.00	2.00e-32	130.00
IUUC-Ocu-074939	Oryctolagus cuniculus	47.14	7.00e-42	162.00
IUUC-Oba-075530	Oryza barthii	88.41	5.00e-84	302.00
IUUC-Obr-076838	Oryza brachyantha	87.92	2.00e-83	300.00
IUUC-Ogl-077606	Oryza glaberrima	88.41	5.00e-84	302.00
IUUC-Ogu-078238	Oryza glumaepatula	88.41	5.00e-84	302.00
IUUC-Oin-079643	Oryza indica	87.92	1.00e-83	301.00
IUUC-Olo-080743	Oryza longistaminata	90.77	1.00e-31	126.00
IUUC-Ome-081274	Oryza meridionalis	88.41	5.00e-84	302.00
IUUC-Oni-082651	Oryza nivara	88.41	5.00e-84	302.00
IUUC-Opu-083933	Oryza punctata	88.41	7.00e-84	302.00
IUUC-Oru-085054	Oryza rufipogon	87.44	4.00e-83	299.00
IUUC-Osa-085716	Oryza sativa	87.92	1.00e-83	301.00
IUUC-Ola-087043	Oryzias latipes	47.62	2.00e-42	164.00
IUUC-Olu-087846	Ostreococcus lucimarinus	51.92	1.00e-48	185.00
IUUC-Oga-088897	Otolemur garnettii	51.12	2.00e-39	154.00
IUUC-Oar-089673	Ovis aries	51.12	1.00e-39	155.00
IUUC-Ptr-091295	Pan troglodytes	47.14	7.00e-42	162.00
IUUC-Pan-092034	Papio anubis	51.12	3.00e-39	154.00
IUUC-Psi-093498	Pelodiscus sinensis	47.14	7.00e-42	162.00
IUUC-Pma-094115	Petromyzon marinus	48.10	9.00e-45	172.00
IUUC-Ppa-095326	Physcomitrella patens	68.60	2.00e-69	254.00
IUUC-Pfo-096940	Poecilia formosa	47.62	2.00e-42	164.00
IUUC-Pab-098279	Pongo abelii	47.14	7.00e-42	162.00
IUUC-Pop-099543	Populus trichocarpa	72.95	2.00e-78	284.00
IUUC-Pca-100782	Procavia capensis	47.14	2.00e-40	158.00
IUUC-Ppe-101789	Prunus persica	69.57	1.00e-71	261.00
IUUC-Pgr-103643	Puccinia graminis	51.45	3.00e-40	157.00
IUUC-Ptt-103772	Puccinia triticina	54.49	4.00e-40	157.00
IUUC-Rno-104984	Rattus norvegicus	47.14	7.00e-42	162.00
IUUC-Sce-106394	Saccharomyces cerevisiae	43.05	3.00e-39	154.00
IUUC-Sha-106624	Sarcophilus harrisii	45.71	7.00e-42	162.00
IUUC-Sja-107866	Schizosaccharomyces japonicus	45.63	3.00e-41	160.00
IUUC-Spo-108209	Schizosaccharomyces pombe	50.94	5.00e-38	150.00
IUUC-Ssl-108609	Sclerotinia sclerotiorum	41.89	1.00e-33	135.00
IUUC-Smo-109656	Selaginella moellendorffii	68.45	7.00e-67	245.00
IUUC-Sit-110639	Setaria italica	91.30	2.00e-94	337.00
IUUC-Sly-110978	Solanum lycopersicum	68.45	4.00e-74	269.00
IUUC-Stu-112088	Solanum tuberosum	69.42	5.00e-75	272.00
IUUC-Sbi-113986	Sorghum bicolor	92.75	8.00e-96	342.00
IUUC-Sre-115046	Sporisorium reilianum	46.30	2.00e-45	175.00
IUUC-Ssc-116314	Sus scrofa	47.14	7.00e-42	162.00
IUUC-Tgu-117427	Taeniopygia guttata	51.12	2.00e-39	154.00
IUUC-Tru-118618	Takifugu rubripes	47.37	2.00e-42	164.00
IUUC-Tsy-119208	Tarsius syrichta	47.14	8.00e-42	162.00
IUUC-Tni-119667	Tetraodon nigroviridis	47.62	2.00e-42	164.00
IUUC-Tca-121446	Theobroma cacao	66.99	2.00e-73	267.00
IUUC-Tre-122053	Trichoderma reesei	51.56	4.00e-33	134.00
IUUC-Tvi-122533	Trichoderma virens	53.12	1.00e-34	139.00
IUUC-Tae-124726	Triticum aestivum	77.88	6.00e-79	285.00
IUUC-Tme-127024	Tuber melanosporum	51.23	5.00e-38	150.00
IUUC-Tbe-127752	Tupaia belangeri	47.12	2.00e-40	157.00
IUUC-Ttr-128287	Tursiops truncatus	51.12	2.00e-39	154.00
IUUC-Uma-129512	Ustilago maydis	46.76	1.00e-46	178.00
IUUC-Vda-129947	Verticillium dahliae	44.93	9.00e-34	136.00
IUUC-Vpa-130481	Vicugna pacos	47.14	9.00e-42	162.00
IUUC-Vvi-131429	Vitis vinifera	68.60	1.00e-73	268.00
IUUC-Xtr-132710	Xenopus tropicalis	38.21	6.00e-32	129.00
IUUC-Xma-134308	Xiphophorus maculatus	47.62	4.00e-42	163.00
IUUC-Yli-134523	Yarrowia lipolytica	42.60	7.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence