iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107769

Ensembl Protein ID

EEB07163

UniProt Accession

B6K1Y2; B6K1Y2_SCHJY

Genbank Protein ID

EEB07163.1

Protein Name

Ubiquitin carboxy terminal hydrolase Ubp6

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02244

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02244	EEB07163	EEB07163

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.60e-53	177.8	206	459
ULD/UDP/UBQ/UBQ_PIM	8.10e-15	52.6	3	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 146  Fqgqlksqikclecdnvs..sreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqk 244
           +   ++s+++c e  ++s  +++++f+ +s++++++++      q +Le  t++ + +      +ek  ++ + +k  ++++lP+++ +++ Rf ++++ +
   Q: 206  MVLGMHSSMTCDEDSTESatETDDEFVNISCHISMHTSY---MTQGILEGLTQQITKR------SEKLGRDAKYTKVSRISRLPKYIAVNFVRFYWKQSIG 297
           5566889999988777776699***************98...5666666666655444......6889999999*************************** PP
   S: 245  srekinkkvefpleLdlspfcts........................................peekqke...........................kkkY 278
           ++ ki +kv+fp eLd  +fct                                         +     e                           +  Y
   Q: 298  KKAKILRKVKFPFELDAVEFCTPelaqklvpvrdqfrefskfkdecerahkrskieateqekeQ-----EeedlatrvavcqslvspdladdegaskCGLY 393
           ***********************88888888888888888888888887777777776655440.....1455666666666666666666666666**** PP
   S: 279  eLiavvvHsG.slssGHYvayvknekgk..WllfdDskVtevkeeevleetg....staYvlfYkr 337
           +Li+v++H G s++sGHY a+++n ++k  W++f+D+k+t+v+++++++  g    ++aY+l+Y+ 
   Q: 394  DLIGVLSHAGaSANSGHYQAWIRNPENKkeWFQFNDDKITVVDQDRIESLDGggesDSAYILLYRT 459
           ************************666666*******************888************96 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvk 72
           +++v++ +gk ++++v+++dt  ++K+k+ +++ v p++qk+I  G +Lk+dt +++ g+k +s+v+++++
   Q: 3    SVNVRW-QGKIYKVDVDPEDTGLNFKQKLYSQTRVAPDRQKIIIRGGQLKNDTVMKDSGLKPNSTVMMMGT 72
           588999.9999**********************************************************86 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MFSVNVRWQG KIYKVDVDPE DTGLNFKQKL YSQTRVAPDR QKIIIRGGQL KNDTVMKDSG 60
LKPNSTVMMM GTIGDVSAIP VPVQMDIPDN EDMEDVKYPS GLVNLGNTCY MNATLQLLKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGCTAGCA AGAACCAACA CCTACCTCGC GCAGTATACG CCGGTAAATC AGTTATGTTT 60
AGTGTAAACG TTCGTTGGCA AGGAAAAATA TACAAAGTTG ATGTTGATCC AGAAGATACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0005838--C:proteasome regulatory particle
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:1901799--P:negative regulation of proteasomal protein catabolic process
GO:0016579--P:protein deubiquitination
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	26.44	6.00e-25	106.00
IUUC-Aml-002053	Ailuropoda melanoleuca	33.40	8.00e-74	268.00
IUUC-Atr-002725	Amborella trichopoda	35.64	9.00e-68	248.00
IUUC-Apl-004031	Anas platyrhynchos	34.64	5.00e-78	282.00
IUUC-Aca-004361	Anolis carolinensis	34.78	1.00e-80	291.00
IUUC-Aly-006176	Arabidopsis lyrata	35.93	4.00e-79	286.00
IUUC-Ath-007658	Arabidopsis thaliana	35.99	5.00e-77	279.00
IUUC-Ago-007796	Ashbya gossypii	36.40	2.00e-83	300.00
IUUC-Acl-008258	Aspergillus clavatus	40.21	6.00e-70	256.00
IUUC-Afl-008732	Aspergillus flavus	38.38	1.00e-93	335.00
IUUC-Afu-008755	Aspergillus fumigatus	38.35	1.00e-93	334.00
IUUC-Ani-009148	Aspergillus nidulans	42.38	1.00e-75	275.00
IUUC-Ang-009878	Aspergillus niger	41.34	1.00e-77	281.00
IUUC-Aor-010239	Aspergillus oryzae	37.15	8.00e-90	322.00
IUUC-Ate-010243	Aspergillus terreus	38.56	2.00e-92	331.00
IUUC-Ame-011327	Astyanax mexicanus	24.95	7.00e-30	122.00
IUUC-Bgr-012231	Blumeria graminis	38.10	7.00e-94	335.00
IUUC-Bta-012553	Bos taurus	34.77	1.00e-75	275.00
IUUC-Bci-013606	Botrytis cinerea	41.73	7.00e-77	279.00
IUUC-Bdi-014567	Brachypodium distachyon	34.97	1.00e-77	281.00
IUUC-Bol-015565	Brassica oleracea	35.73	4.00e-79	286.00
IUUC-Bra-017297	Brassica rapa	35.32	3.00e-78	283.00
IUUC-Cel-018140	Caenorhabditis elegans	33.89	1.00e-70	258.00
IUUC-Cja-019516	Callithrix jacchus	33.79	1.00e-75	275.00
IUUC-Cfa-020808	Canis familiaris	33.33	3.00e-75	273.00
IUUC-Cpo-021688	Cavia porcellus	32.74	4.00e-74	270.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	30.74	2.00e-55	207.00
IUUC-Csa-023429	Chlorocebus sabaeus	32.94	4.00e-73	266.00
IUUC-Cho-024347	Choloepus hoffmanni	32.54	8.00e-74	269.00
IUUC-Cin-025198	Ciona intestinalis	34.53	3.00e-70	256.00
IUUC-Csv-026007	Ciona savignyi	36.29	1.00e-76	278.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	41.94	4.00e-73	266.00
IUUC-Cne-026963	Cryptococcus neoformans	37.04	8.00e-73	265.00
IUUC-Cme-027240	Cyanidioschyzon merolae	30.77	3.00e-42	164.00
IUUC-Dre-027647	Danio rerio	35.39	8.00e-82	295.00
IUUC-Dno-029967	Dasypus novemcinctus	32.94	2.00e-73	267.00
IUUC-Dor-030886	Dipodomys ordii	31.79	8.00e-54	202.00
IUUC-Dse-031466	Dothistroma septosporum	36.44	6.00e-62	229.00
IUUC-Dme-032079	Drosophila melanogaster	35.92	2.00e-86	310.00
IUUC-Ete-032351	Echinops telfairi	33.06	3.00e-73	266.00
IUUC-Eca-033461	Equus caballus	33.33	2.00e-79	287.00
IUUC-Eeu-035220	Erinaceus europaeus	29.62	1.00e-27	115.00
IUUC-Fca-036210	Felis catus	33.33	3.00e-75	273.00
IUUC-Fal-037528	Ficedula albicollis	34.58	1.00e-75	275.00
IUUC-Fox-037805	Fusarium oxysporum	43.05	8.00e-77	279.00
IUUC-Fso-038177	Fusarium solani	44.51	5.00e-78	283.00
IUUC-Gmo-038953	Gadus morhua	33.13	3.00e-71	260.00
IUUC-Ggr-039972	Gaeumannomyces graminis	43.30	4.00e-77	280.00
IUUC-Gga-040462	Gallus gallus	35.42	1.00e-79	288.00
IUUC-Gac-041312	Gasterosteus aculeatus	34.66	8.00e-80	288.00
IUUC-Gma-043255	Glycine max	38.65	2.00e-79	288.00
IUUC-Ggo-045458	Gorilla gorilla	29.22	2.00e-55	207.00
IUUC-Hsa-045706	Homo sapiens	33.14	2.00e-73	268.00
IUUC-Hvu-047821	Hordeum vulgare	37.50	2.00e-36	144.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	32.82	7.00e-78	282.00
IUUC-Lch-050464	Latimeria chalumnae	33.93	5.00e-76	276.00
IUUC-Lpe-051419	Leersia perrieri	34.01	1.00e-72	265.00
IUUC-Loc-052732	Lepisosteus oculatus	36.51	1.00e-83	301.00
IUUC-Lma-053177	Leptosphaeria maculans	43.58	5.00e-78	283.00
IUUC-Laf-053822	Loxodonta africana	34.18	3.00e-75	273.00
IUUC-Mcc-055893	Macaca mulatta	33.14	2.00e-73	268.00
IUUC-Meu-056307	Macropus eugenii	33.07	9.00e-70	255.00
IUUC-Mor-057171	Magnaporthe oryzae	42.56	8.00e-79	285.00
IUUC-Mpo-057415	Magnaporthe poae	44.85	2.00e-80	291.00
IUUC-Mtr-057901	Medicago truncatula	36.29	7.00e-77	279.00
IUUC-Mla-058897	Melampsora laricipopulina	34.83	9.00e-79	285.00
IUUC-Mga-060016	Meleagris gallopavo	34.64	9.00e-78	281.00
IUUC-Mvi-060562	Microbotryum violaceum	36.41	1.00e-58	218.00
IUUC-Mmr-060624	Microcebus murinus	34.33	2.00e-79	287.00
IUUC-Mdo-061809	Monodelphis domestica	34.50	3.00e-76	277.00
IUUC-Mmu-063869	Mus musculus	33.98	3.00e-74	270.00
IUUC-Mac-064876	Musa acuminata	35.39	2.00e-72	264.00
IUUC-Mpu-066480	Mustela putorius furo	33.33	9.00e-76	275.00
IUUC-Mlu-067866	Myotis lucifugus	34.77	1.00e-76	278.00
IUUC-Nfi-068393	Neosartorya fischeri	38.00	4.00e-96	343.00
IUUC-Ncr-068815	Neurospora crassa	39.93	2.00e-94	337.00
IUUC-Nle-070121	Nomascus leucogenys	37.33	7.00e-33	132.00
IUUC-Opr-070712	Ochotona princeps	31.91	5.00e-45	173.00
IUUC-Ont-071544	Oreochromis niloticus	35.46	5.00e-71	259.00
IUUC-Oan-073635	Ornithorhynchus anatinus	34.61	3.00e-65	239.00
IUUC-Ocu-074926	Oryctolagus cuniculus	33.40	7.00e-73	265.00
IUUC-Oba-075633	Oryza barthii	33.95	2.00e-72	264.00
IUUC-Obr-076423	Oryza brachyantha	36.33	2.00e-77	281.00
IUUC-Ogl-077913	Oryza glaberrima	36.05	2.00e-78	284.00
IUUC-Ogu-078435	Oryza glumaepatula	33.95	2.00e-72	264.00
IUUC-Oin-080072	Oryza indica	33.74	3.00e-72	263.00
IUUC-Olo-080535	Oryza longistaminata	32.64	1.00e-62	231.00
IUUC-Ome-081309	Oryza meridionalis	33.95	2.00e-72	264.00
IUUC-Oni-083113	Oryza nivara	33.95	2.00e-72	264.00
IUUC-Opu-083168	Oryza punctata	33.33	7.00e-69	252.00
IUUC-Oru-084253	Oryza rufipogon	33.95	2.00e-72	264.00
IUUC-Osa-085554	Oryza sativa	36.05	2.00e-78	284.00
IUUC-Ola-086998	Oryzias latipes	34.46	2.00e-77	280.00
IUUC-Olu-087818	Ostreococcus lucimarinus	32.22	1.00e-61	228.00
IUUC-Oga-088571	Otolemur garnettii	33.14	5.00e-76	276.00
IUUC-Oar-089526	Ovis aries	33.85	1.00e-75	274.00
IUUC-Ptr-091433	Pan troglodytes	33.14	2.00e-73	268.00
IUUC-Pan-091966	Papio anubis	32.94	4.00e-73	266.00
IUUC-Psi-093458	Pelodiscus sinensis	35.22	5.00e-78	282.00
IUUC-Pma-094343	Petromyzon marinus	32.06	1.00e-37	147.00
IUUC-Pno-095109	Phaeosphaeria nodorum	42.82	7.00e-78	282.00
IUUC-Ppa-095756	Physcomitrella patens	36.64	3.00e-82	296.00
IUUC-Pfo-096514	Poecilia formosa	35.19	6.00e-72	262.00
IUUC-Pab-098477	Pongo abelii	32.21	1.00e-58	218.00
IUUC-Pop-099221	Populus trichocarpa	34.96	3.00e-73	266.00
IUUC-Pca-100791	Procavia capensis	29.10	4.00e-45	173.00
IUUC-Ppe-101812	Prunus persica	34.09	2.00e-73	267.00
IUUC-Pva-102462	Pteropus vampyrus	34.02	7.00e-65	239.00
IUUC-Pgr-103623	Puccinia graminis	38.48	4.00e-63	233.00
IUUC-Ptt-103767	Puccinia triticina	37.54	3.00e-60	224.00
IUUC-Pte-104109	Pyrenophora teres	43.75	2.00e-79	287.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	41.27	3.00e-75	273.00
IUUC-Rno-105351	Rattus norvegicus	33.60	5.00e-73	266.00
IUUC-Sce-106168	Saccharomyces cerevisiae	37.22	1.00e-77	281.00
IUUC-Sha-107491	Sarcophilus harrisii	33.99	2.00e-77	280.00
IUUC-Spo-108174	Schizosaccharomyces pombe	59.74	1.00e-158	550.00
IUUC-Ssl-108659	Sclerotinia sclerotiorum	43.62	8.00e-76	275.00
IUUC-Smo-108805	Selaginella moellendorffii	35.54	2.00e-76	277.00
IUUC-Sit-110361	Setaria italica	36.51	4.00e-80	290.00
IUUC-Sly-110965	Solanum lycopersicum	34.44	8.00e-76	275.00
IUUC-Sar-113355	Sorex araneus	33.65	1.00e-43	168.00
IUUC-Sbi-114778	Sorghum bicolor	35.93	2.00e-78	284.00
IUUC-Sre-115011	Sporisorium reilianum	38.14	5.00e-64	236.00
IUUC-Ssc-116273	Sus scrofa	33.79	4.00e-73	266.00
IUUC-Tgu-117063	Taeniopygia guttata	34.18	4.00e-75	273.00
IUUC-Tru-118381	Takifugu rubripes	33.86	1.00e-73	268.00
IUUC-Tsy-119076	Tarsius syrichta	32.03	4.00e-34	137.00
IUUC-Tni-119941	Tetraodon nigroviridis	33.86	9.00e-73	265.00
IUUC-Tca-121246	Theobroma cacao	34.50	3.00e-79	286.00
IUUC-Tre-121969	Trichoderma reesei	46.30	3.00e-83	300.00
IUUC-Tvi-122543	Trichoderma virens	38.19	5.00e-95	339.00
IUUC-Tae-125484	Triticum aestivum	35.11	6.00e-77	279.00
IUUC-Tur-126128	Triticum urartu	26.38	6.00e-24	103.00
IUUC-Tbe-128030	Tupaia belangeri	30.30	3.00e-58	217.00
IUUC-Ttr-128701	Tursiops truncatus	31.94	1.00e-61	228.00
IUUC-Uma-129657	Ustilago maydis	37.99	2.00e-62	231.00
IUUC-Vda-129723	Verticillium dahliae	41.49	8.00e-78	282.00
IUUC-Vpa-130284	Vicugna pacos	30.37	1.00e-18	85.90
IUUC-Vvi-131037	Vitis vinifera	35.90	4.00e-78	283.00
IUUC-Xtr-132235	Xenopus tropicalis	34.71	1.00e-79	288.00
IUUC-Xma-133840	Xiphophorus maculatus	35.26	3.00e-78	283.00
IUUC-Yli-134453	Yarrowia lipolytica	43.25	6.00e-103	365.00
IUUC-Zma-135669	Zea mays	28.55	7.00e-56	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence