iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129723

Ensembl Protein ID

EGY20701

UniProt Accession

G2XJJ8; G2XJJ8_VERDV

Genbank Protein ID

EGY20701.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

DS572730

Gene Name

VDAG_10330

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_10330	EGY20701	EGY20701

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.30e-54	183.4	110	558
ULD/UDP/UBQ/UBQ_Other	6.80e-08	31.4	10	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenp........kepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.......gy 87
           Gl NlgNtCY+NS+LQ+L +ipel++ l + +k k ++  p        + ++++l++ l +l + +  +++ +v+p+++l++l+++ ++f        g+
   Q: 110  GLINLGNTCYLNSTLQTLRSIPELQQSLTT-YKAKGPAPRPvqgslglqPVSQADLATPLVDLYKMM-AETQDSVAPHTFLTVLRSVYPQFAekskqgnGF 208
           9*****************************.55554444446666666677788**********888.89999******************99999999** PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecd......nvssreepfldlslpvpgkeet 182
           +qqDa+E ++++++ql++ l                           + k +s+i++ + g+++s++   e d      ++s+++e+f++l++++ g  + 
   Q: 209  AQQDAEEAWSQIVSQLKQRL--------------------------GEGKDSSFIDKYMAGEMTSTLEADEQDardggeETSKSTETFFKLNCHIDGTIN- 282
           ********************..........................567899************99997554311122166799*************996. PP
   S: 183  kkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts................ 267
               l+d +++   +e++e+     +   +++++ +kk ++++lP++L++h  Rf ++++++++ ki +kv fp eLd  +fc++                
   Q: 283  ---HLRDGIAAGL-TEKIEK----RSAVLDRDTNFTKKSQISRLPKYLTVHCVRFFWRRDTQKKAKIMRKVVFPHELDAVEFCNDelksmlipvrdkvrei 375
           ...6999987655.466764....6778899999***************************************************9999999999999999 PP
   S: 268  ...............................................................................................peekqk 273
                                                                                                          ++e+ +
   Q: 376  rkdeedvqrarkrrkinandrgdvagssgapqektalekanekkapvsqlpkvsgdgdtemtetyktdaefdaerdaslltlkkeldglinpalkQDEGAN 476
           99999999999999999999999999888888888888888877777777777777777777777777777777777777777777777777766555555 PP
   S: 274  ekkkYeLiavvvHsG.slssGHYvayvkn.............ekgkWllfdDskVtevkeeevleetg....staYvlfYkr 337
           ++  YeL +vv H+G s++sGHY+ayvk+             e+g+W+ f+D+kV+ev+ +++    g    ++a +l+Yk 
   Q: 477  QSGLYELRGVVTHQGsSADSGHYTAYVKKegrvdpktgkrgeEDGNWWWFNDDKVSEVPSTSIDALAGggesHSALILLYKA 558
           5****************************99999998888877888******************988899**********85 PP

ULD/UDP/UBQ/UBQ_Other

   S: 7    sldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           ++ g+ ++++v+ +++  +LK ++++++g+ pe+q+++++G +L+d  + +    k+g++i+++ +
   Q: 10   HS-GKKYDVEVDTTANGETLKYQLYSLTGVEPERQKILVRGGPLKDEADMSKIAFKPGQVIMMMGS 74
           44.568899999999999*********************************************976 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MATIPIVVKH SGKKYDVEVD TTANGETLKY QLYSLTGVEP ERQKILVRGG PLKDEADMSK 60
IAFKPGQVIM MMGSPADGSA TLARPKEAIK FVEDMTEAEA AQQEGATPAG LINLGNTCYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACCA TCCCGAGTGA GTGTACTCCA AGCGAGGCTG TTCTGCTTTC TTCGCTTGTA 60
CTGACATGGT TGCCGCTCAG TTGTCGTCAA ACACTCTGGC AAAAAGTACG ACGTTGAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0005838--C:proteasome regulatory particle
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:1901799--P:negative regulation of proteasomal protein catabolic process
GO:0016579--P:protein deubiquitination
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vda:VDAG_10330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	27.47	7.00e-26	110.00
IUUC-Aml-002053	Ailuropoda melanoleuca	31.97	3.00e-71	260.00
IUUC-Atr-002725	Amborella trichopoda	35.41	4.00e-73	266.00
IUUC-Apl-004031	Anas platyrhynchos	36.41	1.00e-58	218.00
IUUC-Aca-004361	Anolis carolinensis	36.68	1.00e-63	235.00
IUUC-Aly-006078	Arabidopsis lyrata	34.88	5.00e-77	280.00
IUUC-Ath-007623	Arabidopsis thaliana	34.76	1.00e-76	278.00
IUUC-Ago-007796	Ashbya gossypii	32.62	4.00e-80	290.00
IUUC-Acl-008258	Aspergillus clavatus	57.37	0.00e+00	633.00
IUUC-Afl-008732	Aspergillus flavus	59.04	0.00e+00	667.00
IUUC-Afu-008755	Aspergillus fumigatus	58.58	2.00e-180	623.00
IUUC-Ani-009148	Aspergillus nidulans	56.95	0.00e+00	631.00
IUUC-Ang-009878	Aspergillus niger	58.72	0.00e+00	645.00
IUUC-Aor-010239	Aspergillus oryzae	59.04	0.00e+00	667.00
IUUC-Ate-010243	Aspergillus terreus	59.93	0.00e+00	652.00
IUUC-Ame-011327	Astyanax mexicanus	30.04	3.00e-18	84.70
IUUC-Bgr-012231	Blumeria graminis	59.66	0.00e+00	685.00
IUUC-Bta-012553	Bos taurus	32.82	2.00e-71	261.00
IUUC-Bci-013606	Botrytis cinerea	62.85	0.00e+00	676.00
IUUC-Bdi-014567	Brachypodium distachyon	36.33	3.00e-79	287.00
IUUC-Bol-015565	Brassica oleracea	35.78	2.00e-81	294.00
IUUC-Bra-017297	Brassica rapa	36.25	1.00e-80	291.00
IUUC-Cel-018140	Caenorhabditis elegans	31.00	2.00e-63	234.00
IUUC-Cja-019516	Callithrix jacchus	32.99	1.00e-74	271.00
IUUC-Cfa-020808	Canis familiaris	33.22	4.00e-71	260.00
IUUC-Cpo-021688	Cavia porcellus	31.12	2.00e-70	258.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	35.38	2.00e-48	184.00
IUUC-Csa-023429	Chlorocebus sabaeus	32.31	4.00e-71	259.00
IUUC-Cho-024347	Choloepus hoffmanni	32.12	2.00e-70	258.00
IUUC-Cin-025198	Ciona intestinalis	35.68	3.00e-53	201.00
IUUC-Csv-026007	Ciona savignyi	35.23	1.00e-57	215.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	73.38	0.00e+00	746.00
IUUC-Cne-026963	Cryptococcus neoformans	36.23	6.00e-77	279.00
IUUC-Cme-027240	Cyanidioschyzon merolae	32.21	3.00e-45	174.00
IUUC-Dre-027647	Danio rerio	38.94	8.00e-66	242.00
IUUC-Dno-029967	Dasypus novemcinctus	32.31	2.00e-70	257.00
IUUC-Dor-030886	Dipodomys ordii	29.48	9.00e-50	189.00
IUUC-Dse-031466	Dothistroma septosporum	49.25	2.00e-146	510.00
IUUC-Dme-032079	Drosophila melanogaster	34.18	3.00e-61	227.00
IUUC-Ete-032351	Echinops telfairi	32.16	2.00e-68	251.00
IUUC-Eca-033461	Equus caballus	32.99	2.00e-76	278.00
IUUC-Eeu-035220	Erinaceus europaeus	30.12	1.00e-31	129.00
IUUC-Fca-036210	Felis catus	33.22	1.00e-71	262.00
IUUC-Fal-037528	Ficedula albicollis	36.92	7.00e-58	216.00
IUUC-Fox-037805	Fusarium oxysporum	65.45	0.00e+00	707.00
IUUC-Fso-038177	Fusarium solani	66.26	0.00e+00	715.00
IUUC-Gmo-038953	Gadus morhua	36.36	5.00e-64	236.00
IUUC-Ggr-039972	Gaeumannomyces graminis	62.94	0.00e+00	682.00
IUUC-Gga-040462	Gallus gallus	36.05	7.00e-60	223.00
IUUC-Gac-041312	Gasterosteus aculeatus	36.36	3.00e-62	230.00
IUUC-Gma-043255	Glycine max	37.11	4.00e-85	306.00
IUUC-Ggo-045458	Gorilla gorilla	33.87	8.00e-42	162.00
IUUC-Hsa-045706	Homo sapiens	32.31	3.00e-71	260.00
IUUC-Hvu-047821	Hordeum vulgare	43.52	4.00e-40	156.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	36.46	4.00e-63	233.00
IUUC-Lch-050464	Latimeria chalumnae	37.41	9.00e-65	239.00
IUUC-Lpe-051419	Leersia perrieri	36.20	3.00e-76	276.00
IUUC-Loc-052732	Lepisosteus oculatus	37.82	1.00e-65	242.00
IUUC-Lma-053177	Leptosphaeria maculans	56.72	0.00e+00	639.00
IUUC-Laf-053822	Loxodonta africana	32.88	3.00e-72	263.00
IUUC-Mcc-055893	Macaca mulatta	32.31	3.00e-71	260.00
IUUC-Meu-056307	Macropus eugenii	34.35	2.00e-54	204.00
IUUC-Mor-057171	Magnaporthe oryzae	63.40	0.00e+00	675.00
IUUC-Mpo-057415	Magnaporthe poae	61.67	0.00e+00	668.00
IUUC-Mtr-057901	Medicago truncatula	37.11	3.00e-83	300.00
IUUC-Mla-058897	Melampsora laricipopulina	39.12	5.00e-93	333.00
IUUC-Mga-060016	Meleagris gallopavo	36.10	3.00e-59	220.00
IUUC-Mvi-060562	Microbotryum violaceum	44.86	5.00e-80	290.00
IUUC-Mmr-060624	Microcebus murinus	32.81	2.00e-76	277.00
IUUC-Mdo-061809	Monodelphis domestica	35.81	5.00e-59	220.00
IUUC-Mmu-063869	Mus musculus	31.80	2.00e-69	254.00
IUUC-Mac-064876	Musa acuminata	38.29	1.00e-59	222.00
IUUC-Mpu-066480	Mustela putorius furo	32.14	2.00e-71	261.00
IUUC-Mlu-067866	Myotis lucifugus	36.20	8.00e-61	226.00
IUUC-Nfi-068393	Neosartorya fischeri	58.58	0.00e+00	639.00
IUUC-Ncr-068815	Neurospora crassa	63.81	0.00e+00	674.00
IUUC-Nle-070121	Nomascus leucogenys	39.83	9.00e-39	151.00
IUUC-Opr-070712	Ochotona princeps	26.35	1.00e-33	135.00
IUUC-Ont-071544	Oreochromis niloticus	37.56	5.00e-62	229.00
IUUC-Oan-073635	Ornithorhynchus anatinus	34.49	4.00e-43	167.00
IUUC-Ocu-074926	Oryctolagus cuniculus	31.83	2.00e-71	261.00
IUUC-Oba-075633	Oryza barthii	41.00	1.00e-64	238.00
IUUC-Obr-076423	Oryza brachyantha	41.99	8.00e-68	249.00
IUUC-Ogl-077913	Oryza glaberrima	42.11	1.00e-69	255.00
IUUC-Ogu-078435	Oryza glumaepatula	41.00	1.00e-64	238.00
IUUC-Oin-080072	Oryza indica	41.00	1.00e-64	238.00
IUUC-Olo-080535	Oryza longistaminata	32.84	8.00e-61	225.00
IUUC-Ome-081309	Oryza meridionalis	41.00	1.00e-64	238.00
IUUC-Oni-083113	Oryza nivara	41.00	1.00e-64	238.00
IUUC-Opu-083168	Oryza punctata	39.61	2.00e-59	221.00
IUUC-Oru-084253	Oryza rufipogon	41.00	1.00e-64	238.00
IUUC-Osa-085554	Oryza sativa	42.11	1.00e-69	255.00
IUUC-Ola-086998	Oryzias latipes	36.67	2.00e-62	231.00
IUUC-Olu-087818	Ostreococcus lucimarinus	35.27	2.00e-67	248.00
IUUC-Oga-088571	Otolemur garnettii	32.20	4.00e-72	263.00
IUUC-Oar-089526	Ovis aries	32.88	2.00e-71	261.00
IUUC-Ptr-091433	Pan troglodytes	32.31	3.00e-71	260.00
IUUC-Pan-091966	Papio anubis	32.31	4.00e-71	259.00
IUUC-Psi-093458	Pelodiscus sinensis	35.03	1.00e-75	275.00
IUUC-Pma-094343	Petromyzon marinus	34.55	6.00e-41	159.00
IUUC-Pno-095109	Phaeosphaeria nodorum	55.92	0.00e+00	637.00
IUUC-Ppa-095756	Physcomitrella patens	38.04	3.00e-90	323.00
IUUC-Pfo-096514	Poecilia formosa	36.83	1.00e-61	228.00
IUUC-Pab-098477	Pongo abelii	28.31	5.00e-50	189.00
IUUC-Pop-099221	Populus trichocarpa	34.85	6.00e-76	276.00
IUUC-Pca-100791	Procavia capensis	26.48	2.00e-31	127.00
IUUC-Ppe-101812	Prunus persica	36.25	2.00e-76	277.00
IUUC-Pva-102462	Pteropus vampyrus	30.84	1.00e-56	212.00
IUUC-Pgr-103623	Puccinia graminis	43.47	1.00e-74	271.00
IUUC-Ptt-103767	Puccinia triticina	41.49	4.00e-68	250.00
IUUC-Pte-104109	Pyrenophora teres	56.05	0.00e+00	644.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	56.51	0.00e+00	637.00
IUUC-Rno-105351	Rattus norvegicus	34.53	9.00e-59	219.00
IUUC-Sce-106168	Saccharomyces cerevisiae	34.04	5.00e-80	290.00
IUUC-Sha-107491	Sarcophilus harrisii	35.84	6.00e-59	219.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	42.01	1.00e-80	291.00
IUUC-Spo-108174	Schizosaccharomyces pombe	40.50	2.00e-105	374.00
IUUC-Ssl-108659	Sclerotinia sclerotiorum	64.82	0.00e+00	671.00
IUUC-Smo-108805	Selaginella moellendorffii	33.63	2.00e-74	271.00
IUUC-Sit-110361	Setaria italica	42.38	5.00e-72	263.00
IUUC-Sly-110965	Solanum lycopersicum	36.84	1.00e-80	291.00
IUUC-Sar-113355	Sorex araneus	33.64	6.00e-45	172.00
IUUC-Sbi-114778	Sorghum bicolor	41.83	4.00e-69	253.00
IUUC-Sre-115011	Sporisorium reilianum	42.09	3.00e-78	284.00
IUUC-Ssc-116273	Sus scrofa	35.90	9.00e-57	212.00
IUUC-Tgu-117063	Taeniopygia guttata	36.92	6.00e-58	216.00
IUUC-Tru-118381	Takifugu rubripes	36.41	1.00e-64	238.00
IUUC-Tsy-119076	Tarsius syrichta	26.78	2.00e-24	104.00
IUUC-Tni-119941	Tetraodon nigroviridis	38.27	3.00e-65	241.00
IUUC-Tca-121246	Theobroma cacao	35.53	4.00e-79	286.00
IUUC-Tre-121969	Trichoderma reesei	64.41	0.00e+00	673.00
IUUC-Tvi-122543	Trichoderma virens	65.32	0.00e+00	702.00
IUUC-Tae-125744	Triticum aestivum	41.94	2.00e-68	251.00
IUUC-Tur-126128	Triticum urartu	39.87	7.00e-21	93.20
IUUC-Tbe-128030	Tupaia belangeri	28.97	4.00e-52	197.00
IUUC-Ttr-128701	Tursiops truncatus	34.66	1.00e-41	162.00
IUUC-Uma-129657	Ustilago maydis	38.29	4.00e-91	326.00
IUUC-Vpa-130284	Vicugna pacos	26.51	1.00e-20	92.80
IUUC-Vvi-131037	Vitis vinifera	35.87	2.00e-81	294.00
IUUC-Xtr-132235	Xenopus tropicalis	34.15	1.00e-76	278.00
IUUC-Xma-133840	Xiphophorus maculatus	36.92	1.00e-61	228.00
IUUC-Yli-134453	Yarrowia lipolytica	45.24	1.00e-117	414.00
IUUC-Zma-135791	Zea mays	35.09	1.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence