iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062968

UUCD1 version

UUC-MoD-00976

Ensembl Protein ID

ENSMODP00000004830.2

UniProt Accession

F7G9U7; F7G9U7_MONDO

Protein Name

Uncharacterized protein

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000003938.3	ENSMODT00000004933.2	ENSMODP00000004830.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	34.2	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl          +++ +CP+Cr
   Q: 132  CPICMDGYseilqsGRLIVSTKCGHVFCSQCLRDA------LRNASSCPTCR 177
           ********55554433366788**********666......89********8 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

TQRKRRSGTT NSRQAQKRER LVGPTSDMTS ETEPIELVES AGEEVVDLTC ESTEPVVVDL 60
THNDPVVVRI SKNRRQRRNP RISRGQPDSC VLSSDDEEIR DNDVYVTENP SRESVVLEEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCAAAGAA AGCGCCGGAG TGGAACAACA AATTCCAGAC AGGCTCAAAA ACGAGAGCGA 60
TTAGTAGGTC CAACATCTGA CATGACTTCA GAAACTGAGC CAATAGAGCT TGTAGAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	29.81	7.00e-12	64.30
IUUC-Aml-002206	Ailuropoda melanoleuca	65.79	3.00e-60	224.00
IUUC-Atr-002771	Amborella trichopoda	34.25	9.00e-11	60.50
IUUC-Apl-004120	Anas platyrhynchos	74.61	3.00e-74	270.00
IUUC-Aca-004236	Anolis carolinensis	66.14	3.00e-64	237.00
IUUC-Aly-005728	Arabidopsis lyrata	40.98	1.00e-10	59.30
IUUC-Ath-007366	Arabidopsis thaliana	40.98	1.00e-10	59.30
IUUC-Ame-011555	Astyanax mexicanus	53.70	2.00e-39	154.00
IUUC-Bta-012913	Bos taurus	64.55	7.00e-63	232.00
IUUC-Bdi-014655	Brachypodium distachyon	40.98	1.00e-10	60.10
IUUC-Bol-015811	Brassica oleracea	39.34	3.00e-10	58.50
IUUC-Bra-016890	Brassica rapa	38.60	3.00e-08	51.60
IUUC-Cja-019151	Callithrix jacchus	65.79	2.00e-58	218.00
IUUC-Cfa-020868	Canis familiaris	65.80	8.00e-60	222.00
IUUC-Cpo-022249	Cavia porcellus	62.11	6.00e-55	206.00
IUUC-Csa-024125	Chlorocebus sabaeus	62.96	7.00e-58	216.00
IUUC-Cin-025749	Ciona intestinalis	47.54	2.00e-15	75.50
IUUC-Csv-026318	Ciona savignyi	34.69	3.00e-15	74.70
IUUC-Dre-028145	Danio rerio	47.83	3.00e-33	134.00
IUUC-Dno-029605	Dasypus novemcinctus	66.49	4.00e-66	243.00
IUUC-Dor-030898	Dipodomys ordii	65.08	3.00e-62	231.00
IUUC-Dme-032177	Drosophila melanogaster	50.85	1.00e-12	67.40
IUUC-Ete-032694	Echinops telfairi	60.64	4.00e-52	197.00
IUUC-Eca-033443	Equus caballus	65.61	7.00e-60	223.00
IUUC-Eeu-034603	Erinaceus europaeus	71.15	2.00e-40	157.00
IUUC-Fca-035507	Felis catus	66.14	1.00e-58	218.00
IUUC-Fal-037382	Ficedula albicollis	73.58	4.00e-68	250.00
IUUC-Gmo-038960	Gadus morhua	39.60	7.00e-21	92.40
IUUC-Gga-040493	Gallus gallus	72.25	8.00e-73	266.00
IUUC-Gac-042194	Gasterosteus aculeatus	50.62	5.00e-37	147.00
IUUC-Gma-042666	Glycine max	37.70	3.00e-09	55.10
IUUC-Ggo-044726	Gorilla gorilla	63.49	8.00e-58	216.00
IUUC-Hsa-046212	Homo sapiens	63.49	8.00e-58	216.00
IUUC-Hvu-047337	Hordeum vulgare	39.34	3.00e-11	62.00
IUUC-Itr-047892	Ictidomys tridecemlineatus	64.21	5.00e-59	220.00
IUUC-Lpe-050920	Leersia perrieri	36.07	3.00e-10	58.50
IUUC-Loc-051907	Lepisosteus oculatus	48.47	6.00e-36	143.00
IUUC-Laf-054145	Loxodonta africana	64.21	1.00e-56	212.00
IUUC-Mcc-055689	Macaca mulatta	62.96	4.00e-57	213.00
IUUC-Meu-056654	Macropus eugenii	55.85	3.00e-49	187.00
IUUC-Mtr-058314	Medicago truncatula	41.94	2.00e-11	61.60
IUUC-Mga-059303	Meleagris gallopavo	73.06	4.00e-73	267.00
IUUC-Mmr-061355	Microcebus murinus	63.49	7.00e-58	216.00
IUUC-Mmu-064421	Mus musculus	65.26	5.00e-65	240.00
IUUC-Mac-064573	Musa acuminata	36.11	1.00e-11	63.90
IUUC-Mpu-066522	Mustela putorius furo	65.79	5.00e-60	223.00
IUUC-Mlu-067065	Myotis lucifugus	65.26	1.00e-59	221.00
IUUC-Nle-069198	Nomascus leucogenys	64.55	1.00e-58	218.00
IUUC-Opr-071141	Ochotona princeps	64.55	6.00e-63	233.00
IUUC-Oan-073341	Ornithorhynchus anatinus	68.75	2.00e-42	164.00
IUUC-Ocu-073787	Oryctolagus cuniculus	67.02	3.00e-68	251.00
IUUC-Oba-075460	Oryza barthii	34.67	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	31.03	5.00e-10	58.20
IUUC-Ogl-077094	Oryza glaberrima	32.18	9.00e-12	63.50
IUUC-Ogu-078677	Oryza glumaepatula	34.67	4.00e-11	61.60
IUUC-Oin-079992	Oryza indica	32.18	9.00e-12	63.50
IUUC-Olo-080257	Oryza longistaminata	36.00	2.00e-11	62.40
IUUC-Ome-081943	Oryza meridionalis	32.18	9.00e-12	64.30
IUUC-Oni-082671	Oryza nivara	34.67	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	34.67	5.00e-11	61.60
IUUC-Oru-084650	Oryza rufipogon	34.67	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	32.18	1.00e-11	63.50
IUUC-Ola-086970	Oryzias latipes	41.18	2.00e-33	135.00
IUUC-Olu-087634	Ostreococcus lucimarinus	38.98	4.00e-11	60.80
IUUC-Oga-088242	Otolemur garnettii	66.84	2.00e-67	248.00
IUUC-Oar-089469	Ovis aries	65.79	2.00e-65	241.00
IUUC-Ptr-091254	Pan troglodytes	60.85	4.00e-54	204.00
IUUC-Pan-092919	Papio anubis	63.35	3.00e-58	217.00
IUUC-Psi-093929	Pelodiscus sinensis	73.33	2.00e-72	265.00
IUUC-Pma-094118	Petromyzon marinus	48.28	3.00e-22	95.90
IUUC-Ppa-095567	Physcomitrella patens	45.90	6.00e-12	64.30
IUUC-Pfo-097412	Poecilia formosa	49.38	3.00e-35	141.00
IUUC-Pab-098424	Pongo abelii	63.49	7.00e-58	216.00
IUUC-Pop-099570	Populus trichocarpa	35.00	2.00e-10	58.50
IUUC-Pca-100463	Procavia capensis	58.57	2.00e-29	121.00
IUUC-Ppe-101755	Prunus persica	41.94	2.00e-10	58.50
IUUC-Pva-102594	Pteropus vampyrus	63.57	2.00e-38	151.00
IUUC-Pgr-103450	Puccinia graminis	37.10	1.00e-05	43.90
IUUC-Rno-105460	Rattus norvegicus	64.06	9.00e-58	216.00
IUUC-Sha-107487	Sarcophilus harrisii	91.05	8.00e-89	319.00
IUUC-Sja-107707	Schizosaccharomyces japonicus	35.63	2.00e-06	45.80
IUUC-Smo-108908	Selaginella moellendorffii	31.43	2.00e-08	52.80
IUUC-Sit-109959	Setaria italica	40.98	2.00e-06	46.60
IUUC-Stu-112694	Solanum tuberosum	40.32	5.00e-10	57.40
IUUC-Sar-113601	Sorex araneus	66.67	3.00e-60	224.00
IUUC-Sbi-114398	Sorghum bicolor	40.98	1.00e-05	43.10
IUUC-Ssc-115911	Sus scrofa	65.08	2.00e-58	218.00
IUUC-Tgu-117264	Taeniopygia guttata	74.35	1.00e-68	252.00
IUUC-Tru-117663	Takifugu rubripes	50.30	2.00e-37	147.00
IUUC-Tsy-118883	Tarsius syrichta	63.76	3.00e-48	183.00
IUUC-Tae-123199	Triticum aestivum	31.97	4.00e-12	64.70
IUUC-Tur-126363	Triticum urartu	31.45	1.00e-11	63.90
IUUC-Ttr-128950	Tursiops truncatus	83.08	1.00e-31	129.00
IUUC-Vvi-130833	Vitis vinifera	45.16	1.00e-11	63.50
IUUC-Xtr-132879	Xenopus tropicalis	64.29	2.00e-45	174.00
IUUC-Xma-133319	Xiphophorus maculatus	50.00	4.00e-33	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence