iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069198

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01116126

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000000160.2	ENSNLET00000000197.2	ENSNLEP00000000182.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-09	35.8	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 132  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 177
           ********55553322255788*********9......4559*********8 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MSTRKRRGGA INSRQAQKRT REATSTPEIS LEAEPIELVE TAGDEIVDLT CESLEPVVVD 60
LTHNDSVVVS DERRRPRRNA RRLPQDHADS CVVSSDDEEL SRDRDVYVTT HTPRNARDEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGACCTAA CTAGCTCCCG GTTAGGCCCG GGCTGTGCCG GAAAGCAGCG GTAAGTCAAG 60
GCCTTTGCAG ATGCGAGGTT TAGGCGGCTT CGCGGCCTAC AGAGGCCTCG GCCCGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002206	Ailuropoda melanoleuca	91.98	1.00e-83	301.00
IUUC-Atr-002771	Amborella trichopoda	33.33	2.00e-09	55.80
IUUC-Apl-004120	Anas platyrhynchos	69.39	1.00e-69	255.00
IUUC-Aca-004236	Anolis carolinensis	62.11	7.00e-60	223.00
IUUC-Ame-011555	Astyanax mexicanus	50.93	2.00e-36	144.00
IUUC-Bta-012913	Bos taurus	86.32	4.00e-86	310.00
IUUC-Cel-018585	Caenorhabditis elegans	33.33	2.00e-08	52.40
IUUC-Cja-019151	Callithrix jacchus	95.81	6.00e-87	312.00
IUUC-Cfa-020868	Canis familiaris	90.00	5.00e-81	293.00
IUUC-Cpo-022249	Cavia porcellus	86.63	2.00e-74	271.00
IUUC-Csa-024125	Chlorocebus sabaeus	96.84	3.00e-90	323.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.70
IUUC-Csv-026318	Ciona savignyi	40.98	5.00e-13	67.40
IUUC-Dre-028145	Danio rerio	43.75	4.00e-32	130.00
IUUC-Dno-029605	Dasypus novemcinctus	90.53	2.00e-92	331.00
IUUC-Dor-030898	Dipodomys ordii	88.95	5.00e-90	323.00
IUUC-Ete-032694	Echinops telfairi	85.56	8.00e-73	265.00
IUUC-Eca-033443	Equus caballus	93.16	5.00e-86	309.00
IUUC-Eeu-034603	Erinaceus europaeus	94.17	2.00e-55	207.00
IUUC-Fca-035507	Felis catus	91.98	3.00e-81	293.00
IUUC-Fal-037382	Ficedula albicollis	66.84	4.00e-63	233.00
IUUC-Gmo-038960	Gadus morhua	71.43	7.00e-19	85.50
IUUC-Gga-040493	Gallus gallus	67.01	6.00e-67	246.00
IUUC-Gac-042194	Gasterosteus aculeatus	48.68	3.00e-35	140.00
IUUC-Ggo-044726	Gorilla gorilla	98.42	2.00e-91	327.00
IUUC-Hsa-046212	Homo sapiens	98.42	2.00e-91	327.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	94.65	2.00e-84	304.00
IUUC-Lpe-050920	Leersia perrieri	34.57	4.00e-11	61.60
IUUC-Loc-051907	Lepisosteus oculatus	45.18	9.00e-35	139.00
IUUC-Laf-054145	Loxodonta africana	88.24	7.00e-79	286.00
IUUC-Mcc-055689	Macaca mulatta	97.37	3.00e-90	323.00
IUUC-Meu-056654	Macropus eugenii	47.06	2.00e-40	157.00
IUUC-Mtr-058314	Medicago truncatula	45.45	1.00e-10	58.90
IUUC-Mga-059303	Meleagris gallopavo	68.37	8.00e-69	252.00
IUUC-Mmr-061355	Microcebus murinus	95.26	1.00e-87	315.00
IUUC-Mdo-062968	Monodelphis domestica	66.67	2.00e-66	244.00
IUUC-Mmu-064421	Mus musculus	89.84	5.00e-91	326.00
IUUC-Mpu-066522	Mustela putorius furo	91.98	1.00e-83	301.00
IUUC-Mlu-067065	Myotis lucifugus	88.24	6.00e-80	289.00
IUUC-Opr-071141	Ochotona princeps	84.49	7.00e-87	312.00
IUUC-Oan-073341	Ornithorhynchus anatinus	65.31	5.00e-35	139.00
IUUC-Ocu-073787	Oryctolagus cuniculus	93.58	2.00e-93	334.00
IUUC-Ogl-077094	Oryza glaberrima	37.97	1.00e-12	66.20
IUUC-Oin-079992	Oryza indica	37.97	1.00e-12	66.20
IUUC-Ome-081943	Oryza meridionalis	37.97	1.00e-12	67.00
IUUC-Osa-086110	Oryza sativa	37.97	1.00e-12	66.20
IUUC-Ola-086970	Oryzias latipes	42.86	8.00e-33	132.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	2.00e-10	58.20
IUUC-Oga-088242	Otolemur garnettii	94.12	4.00e-94	336.00
IUUC-Oar-089469	Ovis aries	86.63	9.00e-89	318.00
IUUC-Ptr-091254	Pan troglodytes	92.63	3.00e-84	303.00
IUUC-Pan-092776	Papio anubis	97.37	3.00e-90	323.00
IUUC-Psi-093929	Pelodiscus sinensis	68.53	3.00e-66	244.00
IUUC-Pma-094118	Petromyzon marinus	49.38	1.00e-20	90.50
IUUC-Pfo-097412	Poecilia formosa	47.20	4.00e-33	134.00
IUUC-Pab-098424	Pongo abelii	97.89	7.00e-91	325.00
IUUC-Pca-100463	Procavia capensis	84.40	4.00e-50	190.00
IUUC-Pva-102594	Pteropus vampyrus	88.65	5.00e-61	226.00
IUUC-Rno-105460	Rattus norvegicus	92.06	1.00e-83	301.00
IUUC-Sha-107487	Sarcophilus harrisii	70.37	1.00e-66	245.00
IUUC-Sar-113601	Sorex araneus	86.10	4.00e-79	286.00
IUUC-Ssc-115911	Sus scrofa	92.63	2.00e-85	307.00
IUUC-Tgu-117264	Taeniopygia guttata	69.31	1.00e-62	231.00
IUUC-Tru-117663	Takifugu rubripes	47.90	1.00e-35	142.00
IUUC-Tsy-118883	Tarsius syrichta	89.86	2.00e-68	250.00
IUUC-Ttr-128950	Tursiops truncatus	66.32	2.00e-66	244.00
IUUC-Vvi-130833	Vitis vinifera	40.32	3.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	58.17	2.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence