iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095619

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SNF2 family DNA-dependent ATPase

Genbank Nucleotide ID

DS544892

Gene Name

CHR1510; PHYPADRAFT_112144

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S3_476V6	PP1S3_476V6.2	PP1S3_476V6.2
PP1S3_476V6	PP1S3_476V6.1	PP1S3_476V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	30.48	5.00e-79	294.00	IUUC-Hsa-046172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MARRKQAKPS RPSGSTVPTN GEVTDQLVQN EERGELAAVL EDAEELPDVL IGKDQAVPET 60
TPTNGRFKNT SGHGKCIIEE VEVILPEFSE RGAEFAEITL LDPVLVVNYD TKAKGKDEEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGGC GGAAGCAAGC CAAGCCCTCT AGACCTAGCG GATCCACTGT TCCAACCAAT 60
GGAGAGGTTA CCGACCAACT TGTGCAGAAT GAGGAGAGAG GTGAGCTGGC TGCAGTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_112144

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002896	Amborella trichopoda	37.59	0.00e+00	691.00
IUUC-Apl-003428	Anas platyrhynchos	32.13	1.00e-88	321.00
IUUC-Aca-004510	Anolis carolinensis	32.49	3.00e-91	330.00
IUUC-Aly-005691	Arabidopsis lyrata	34.95	0.00e+00	648.00
IUUC-Ath-007139	Arabidopsis thaliana	35.19	0.00e+00	677.00
IUUC-Ame-011882	Astyanax mexicanus	31.25	2.00e-91	330.00
IUUC-Bgr-012295	Blumeria graminis	27.95	8.00e-25	109.00
IUUC-Bta-012528	Bos taurus	30.88	5.00e-85	309.00
IUUC-Bci-013701	Botrytis cinerea	30.56	1.00e-29	125.00
IUUC-Bdi-014034	Brachypodium distachyon	35.72	1.00e-176	613.00
IUUC-Bol-015555	Brassica oleracea	38.41	4.00e-133	469.00
IUUC-Bra-016916	Brassica rapa	37.84	2.00e-133	469.00
IUUC-Cja-019391	Callithrix jacchus	30.68	2.00e-84	307.00
IUUC-Cfa-020732	Canis familiaris	30.82	4.00e-86	313.00
IUUC-Cpo-021641	Cavia porcellus	30.39	6.00e-86	312.00
IUUC-Csa-023937	Chlorocebus sabaeus	30.48	9.00e-86	311.00
IUUC-Cme-027178	Cyanidioschyzon merolae	31.98	7.00e-75	275.00
IUUC-Dre-028441	Danio rerio	31.35	9.00e-92	332.00
IUUC-Dno-029395	Dasypus novemcinctus	30.87	2.00e-84	307.00
IUUC-Dme-031785	Drosophila melanogaster	32.12	2.00e-33	137.00
IUUC-Ete-032502	Echinops telfairi	33.33	5.00e-73	269.00
IUUC-Eca-033455	Equus caballus	28.47	8.00e-66	245.00
IUUC-Eeu-034956	Erinaceus europaeus	29.02	2.00e-69	257.00
IUUC-Fca-035984	Felis catus	30.68	5.00e-82	299.00
IUUC-Fal-036811	Ficedula albicollis	32.13	4.00e-91	329.00
IUUC-Gmo-039126	Gadus morhua	31.67	4.00e-91	329.00
IUUC-Gga-041238	Gallus gallus	31.98	5.00e-91	329.00
IUUC-Gac-041614	Gasterosteus aculeatus	30.34	2.00e-89	324.00
IUUC-Gma-043259	Glycine max	37.75	0.00e+00	663.00
IUUC-Ggo-045213	Gorilla gorilla	28.26	3.00e-73	270.00
IUUC-Hsa-046172	Homo sapiens	30.62	4.00e-86	313.00
IUUC-Hvu-047286	Hordeum vulgare	31.05	1.00e-64	239.00
IUUC-Itr-048880	Ictidomys tridecemlineatus	30.78	1.00e-85	311.00
IUUC-Kpa-049196	Komagataella pastoris	28.28	4.00e-25	110.00
IUUC-Lch-050648	Latimeria chalumnae	31.84	4.00e-92	333.00
IUUC-Lpe-050871	Leersia perrieri	35.91	1.00e-176	613.00
IUUC-Loc-051862	Lepisosteus oculatus	31.93	7.00e-92	332.00
IUUC-Lma-053266	Leptosphaeria maculans	31.05	3.00e-24	106.00
IUUC-Laf-053851	Loxodonta africana	30.64	3.00e-85	310.00
IUUC-Mcc-055066	Macaca mulatta	30.48	1.00e-85	311.00
IUUC-Meu-056104	Macropus eugenii	30.85	1.00e-55	212.00
IUUC-Mor-057226	Magnaporthe oryzae	31.80	3.00e-27	117.00
IUUC-Mtr-058336	Medicago truncatula	37.04	1.00e-177	617.00
IUUC-Mga-059775	Meleagris gallopavo	31.98	8.00e-91	328.00
IUUC-Mdo-062943	Monodelphis domestica	32.71	2.00e-93	337.00
IUUC-Mmu-064115	Mus musculus	31.55	2.00e-87	317.00
IUUC-Mac-064445	Musa acuminata	36.72	1.00e-122	433.00
IUUC-Mpu-066850	Mustela putorius furo	30.68	1.00e-85	311.00
IUUC-Mlu-067610	Myotis lucifugus	30.24	6.00e-81	296.00
IUUC-Ncr-068745	Neurospora crassa	32.68	1.00e-29	125.00
IUUC-Nle-070055	Nomascus leucogenys	30.48	2.00e-85	311.00
IUUC-Ont-071526	Oreochromis niloticus	30.78	6.00e-89	322.00
IUUC-Oan-073609	Ornithorhynchus anatinus	32.66	3.00e-83	302.00
IUUC-Ocu-074042	Oryctolagus cuniculus	31.80	2.00e-84	307.00
IUUC-Oba-075121	Oryza barthii	35.66	1.00e-174	607.00
IUUC-Obr-076312	Oryza brachyantha	35.96	3.00e-180	625.00
IUUC-Ogl-077560	Oryza glaberrima	35.58	5.00e-174	605.00
IUUC-Ogu-078746	Oryza glumaepatula	35.58	5.00e-175	608.00
IUUC-Oin-080153	Oryza indica	38.50	5.00e-99	355.00
IUUC-Olo-080436	Oryza longistaminata	36.11	5.00e-168	585.00
IUUC-Oni-082845	Oryza nivara	35.58	3.00e-173	602.00
IUUC-Opu-083321	Oryza punctata	35.54	1.00e-167	583.00
IUUC-Oru-084329	Oryza rufipogon	35.49	2.00e-173	603.00
IUUC-Olu-087671	Ostreococcus lucimarinus	30.68	8.00e-120	424.00
IUUC-Oar-090005	Ovis aries	30.78	6.00e-84	305.00
IUUC-Pan-092723	Papio anubis	30.25	1.00e-75	278.00
IUUC-Psi-093870	Pelodiscus sinensis	31.98	3.00e-91	330.00
IUUC-Pno-095005	Phaeosphaeria nodorum	32.70	1.00e-30	128.00
IUUC-Pfo-096833	Poecilia formosa	31.01	1.00e-90	328.00
IUUC-Pab-098544	Pongo abelii	30.48	2.00e-85	310.00
IUUC-Pop-099540	Populus trichocarpa	36.14	0.00e+00	682.00
IUUC-Ppe-102038	Prunus persica	36.23	0.00e+00	697.00
IUUC-Pte-104081	Pyrenophora teres	32.32	1.00e-26	115.00
IUUC-Pyt-104477	Pyrenophora triticirepentis	32.70	9.00e-27	115.00
IUUC-Rno-104959	Rattus norvegicus	31.79	4.00e-88	320.00
IUUC-Sha-107078	Sarcophilus harrisii	32.42	9.00e-93	335.00
IUUC-Ssl-108615	Sclerotinia sclerotiorum	32.34	2.00e-24	107.00
IUUC-Smo-108991	Selaginella moellendorffii	38.32	8.00e-121	428.00
IUUC-Sit-110047	Setaria italica	36.21	2.00e-114	407.00
IUUC-Sly-111232	Solanum lycopersicum	37.84	4.00e-162	565.00
IUUC-Sar-113738	Sorex araneus	29.06	8.00e-76	278.00
IUUC-Sbi-114485	Sorghum bicolor	38.16	8.00e-116	411.00
IUUC-Ssc-116362	Sus scrofa	30.92	6.00e-86	312.00
IUUC-Tgu-117188	Taeniopygia guttata	31.84	2.00e-89	323.00
IUUC-Tru-117637	Takifugu rubripes	31.07	1.00e-88	321.00
IUUC-Tni-119701	Tetraodon nigroviridis	31.31	9.00e-89	322.00
IUUC-Tca-121831	Theobroma cacao	34.76	0.00e+00	682.00
IUUC-Tae-123569	Triticum aestivum	34.84	8.00e-171	594.00
IUUC-Tur-125964	Triticum urartu	32.97	5.00e-139	488.00
IUUC-Tbe-127799	Tupaia belangeri	37.19	2.00e-31	131.00
IUUC-Vvi-131682	Vitis vinifera	40.11	1.00e-142	501.00
IUUC-Xtr-132232	Xenopus tropicalis	29.46	1.00e-73	271.00
IUUC-Xma-133291	Xiphophorus maculatus	31.30	3.00e-91	330.00
IUUC-Zma-135327	Zea mays	36.04	1.00e-155	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence