iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098950

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_251998; POPTR_0015s08490g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s08490	POPTR_0015s08490.1	POPTR_0015s08490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.4	142	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp C H+fh dC+  w         + +CPlCr
   Q: 142  CAVCLCEFsgqER-LRLLPlCSHAFHIDCIDTW------LLSNSTCPLCR 184
           ********99666.*******************......888889****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MCRFLFEVKQ KDGFAIYPPP VSPPSSVSSP YNGLNYEKES TPPSSSLNKI SPVLLLVIGV 60
LAVIFFVSGL LHLLVRFLLK RASFSPIYHS NRFPETSGSH SIQRQLQQLF RLHDSGLDQA 120

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Nucleotide Sequence
(Fasta)

ATGTGCAGAT TTCTATTTGA AGTCAAACAA AAAGATGGCT TTGCAATATA TCCACCTCCT 60
GTATCACCTC CCTCATCAGT CTCGTCTCCA TACAATGGTC TCAACTATGA AAAAGAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s08490g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003834	Anas platyrhynchos	47.37	1.00e-14	74.70
IUUC-Bta-012758	Bos taurus	37.76	3.00e-14	73.20
IUUC-Cfa-020202	Canis familiaris	47.13	8.00e-17	81.60
IUUC-Cin-025111	Ciona intestinalis	50.00	2.00e-13	68.60
IUUC-Fal-036981	Ficedula albicollis	46.05	7.00e-15	75.10
IUUC-Gga-041114	Gallus gallus	47.37	7.00e-15	75.10
IUUC-Tgu-117477	Taeniopygia guttata	46.05	3.00e-15	76.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence