iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002600

Ensembl Protein ID

ERN16745

UniProt Accession

U5D3C8; U5D3C8_AMBTC

Genbank Protein ID

ERN16745.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392405

Gene Name

AMTR_s00057p00026390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00057p00026390	ERN16745	ERN16745

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-26	89.5	389	422
UBD/Beta-Prp	1.40e-45	156.2	303	569

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWD 29
           gHt+ vt++af   ++    l+s+sdDgt+++WD
   Q: 389  GHTGAVTAIAFsprPSavYQLLSSSDDGTCRIWD 422
           8***********99666677************** PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp. 104
           l+gh+ +v +   f +++++++tgs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+  v++++fsp 
   Q: 303  LRGHQNAVYC-AIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNAVVASASNDCIIRVWRLPDGVPISVLRGHTGAVTAIAFSPr 402
           6667665555.999**************************************************************************************9 PP
   S: 105  .sg.dklvsGshdrtirvwdletgqclee.........................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkll 172
            s  + l+s s+d t r+wd ++ q +                             s++++ + c +++ +g ++v+Gs D+  r+W+       ++++  
   Q: 403  pSAvYQLLSSSDDGTCRIWDARHSQSSPRiyipkppdpisglkanggknsepsqAMSQRSHQILCCAYNANGTVFVTGSSDTYARVWSAckwnleESEQPN 503
           9666**************************************************999**************************************777777 PP
   S: 173  rtl...tgghtdsvyslsfdsng..........................kelvsgsldgtvklwdlq 210
           +++   +g h+++v+ ++f+                               +v++s+dg+ ++w  +
   Q: 504  HEMdvlSG-HENDVNYVQFSGCAvasrslstdfmkednvpkfknswfthDNIVTCSRDGSAIIWIPR 569
           77777365.*********655555555666666777789999999999999*************655 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSHPPSWSGS SVGDKLVSLH SRGHKLISWR NFLKDRTERQ SPISVFGEAY DEVDSLACAT 60
KDMACRKYDA SAGAAPLNLT PSTLAGRTNE TGYPSDPLAA TSPPMEADVD IDLSEVYFLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCACC CACCCTCCTG GAGTGGTAGC TCAGTTGGAG ACAAGCTAGG TACGGTTGTT 60
AAGACATTTG TGGGTCCCTT TGGGGCCGGC AATGCTACCG TGTAAAAAAT GGAATCTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	53.93	0.00e+00	969.00
IUUC-Aml-001881	Ailuropoda melanoleuca	29.96	6.00e-71	262.00
IUUC-Apl-003700	Anas platyrhynchos	37.75	1.00e-33	138.00
IUUC-Aca-004474	Anolis carolinensis	31.65	2.00e-78	287.00
IUUC-Aly-006406	Arabidopsis lyrata	71.17	0.00e+00	1073.00
IUUC-Ath-006801	Arabidopsis thaliana	68.18	0.00e+00	1068.00
IUUC-Ame-010718	Astyanax mexicanus	30.16	4.00e-75	276.00
IUUC-Bta-013217	Bos taurus	30.21	1.00e-72	268.00
IUUC-Bdi-014797	Brachypodium distachyon	50.44	0.00e+00	859.00
IUUC-Bol-015737	Brassica oleracea	67.99	0.00e+00	1108.00
IUUC-Bra-017961	Brassica rapa	67.99	0.00e+00	1110.00
IUUC-Cja-018868	Callithrix jacchus	31.04	1.00e-78	287.00
IUUC-Cfa-021037	Canis familiaris	30.35	5.00e-74	273.00
IUUC-Cpo-021934	Cavia porcellus	29.81	5.00e-73	269.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	32.69	5.00e-31	128.00
IUUC-Csa-023618	Chlorocebus sabaeus	31.40	2.00e-78	287.00
IUUC-Cho-024690	Choloepus hoffmanni	28.75	2.00e-34	141.00
IUUC-Cin-025702	Ciona intestinalis	35.14	3.00e-29	121.00
IUUC-Csv-025813	Ciona savignyi	26.98	7.00e-57	214.00
IUUC-Dre-028029	Danio rerio	30.75	6.00e-76	278.00
IUUC-Dno-030048	Dasypus novemcinctus	31.23	6.00e-72	265.00
IUUC-Dor-030195	Dipodomys ordii	34.71	2.00e-31	131.00
IUUC-Dme-031752	Drosophila melanogaster	28.65	1.00e-68	254.00
IUUC-Ete-032717	Echinops telfairi	33.02	1.00e-34	142.00
IUUC-Eca-034274	Equus caballus	33.86	6.00e-69	255.00
IUUC-Eeu-034871	Erinaceus europaeus	28.69	1.00e-36	148.00
IUUC-Fca-036099	Felis catus	30.10	4.00e-71	263.00
IUUC-Fal-037465	Ficedula albicollis	30.31	1.00e-36	148.00
IUUC-Gmo-039116	Gadus morhua	26.97	5.00e-21	96.70
IUUC-Gga-040798	Gallus gallus	31.79	8.00e-43	169.00
IUUC-Gac-042435	Gasterosteus aculeatus	25.73	9.00e-43	168.00
IUUC-Gma-043973	Glycine max	51.33	0.00e+00	1512.00
IUUC-Ggo-045500	Gorilla gorilla	30.30	2.00e-72	267.00
IUUC-Hsa-046757	Homo sapiens	31.55	2.00e-78	286.00
IUUC-Hvu-047706	Hordeum vulgare	79.05	5.00e-149	519.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	24.68	8.00e-20	90.90
IUUC-Lch-049662	Latimeria chalumnae	30.89	1.00e-79	291.00
IUUC-Lpe-051619	Leersia perrieri	63.21	0.00e+00	1147.00
IUUC-Loc-052672	Lepisosteus oculatus	31.27	2.00e-75	277.00
IUUC-Laf-053848	Loxodonta africana	30.10	3.00e-72	266.00
IUUC-Mcc-055061	Macaca mulatta	31.40	2.00e-77	283.00
IUUC-Meu-056321	Macropus eugenii	28.71	1.00e-49	191.00
IUUC-Mtr-058094	Medicago truncatula	63.61	0.00e+00	1172.00
IUUC-Mga-060063	Meleagris gallopavo	30.78	2.00e-66	247.00
IUUC-Mmr-061227	Microcebus murinus	30.00	2.00e-73	271.00
IUUC-Mdo-061903	Monodelphis domestica	31.56	6.00e-77	282.00
IUUC-Mmu-063772	Mus musculus	31.21	4.00e-78	286.00
IUUC-Mac-065343	Musa acuminata	62.98	0.00e+00	1240.00
IUUC-Mpu-066628	Mustela putorius furo	29.86	1.00e-72	267.00
IUUC-Mlu-068082	Myotis lucifugus	29.96	9.00e-71	261.00
IUUC-Nle-069402	Nomascus leucogenys	30.39	1.00e-71	265.00
IUUC-Opr-070971	Ochotona princeps	26.39	1.00e-39	158.00
IUUC-Ont-072221	Oreochromis niloticus	32.66	1.00e-77	285.00
IUUC-Oan-073185	Ornithorhynchus anatinus	30.82	3.00e-69	256.00
IUUC-Ocu-074033	Oryctolagus cuniculus	33.86	1.00e-68	254.00
IUUC-Oba-075709	Oryza barthii	61.93	0.00e+00	1144.00
IUUC-Obr-076619	Oryza brachyantha	62.07	0.00e+00	1158.00
IUUC-Ogl-077493	Oryza glaberrima	50.43	0.00e+00	874.00
IUUC-Ogu-078641	Oryza glumaepatula	48.21	0.00e+00	803.00
IUUC-Oin-079669	Oryza indica	73.06	0.00e+00	744.00
IUUC-Olo-080755	Oryza longistaminata	49.61	0.00e+00	827.00
IUUC-Oni-082991	Oryza nivara	48.13	0.00e+00	807.00
IUUC-Opu-083233	Oryza punctata	61.63	0.00e+00	1162.00
IUUC-Oru-085195	Oryza rufipogon	61.76	0.00e+00	1135.00
IUUC-Ola-086648	Oryzias latipes	32.80	4.00e-77	283.00
IUUC-Olu-087745	Ostreococcus lucimarinus	32.49	5.00e-79	288.00
IUUC-Oga-089053	Otolemur garnettii	29.96	1.00e-70	261.00
IUUC-Oar-090042	Ovis aries	30.67	2.00e-71	264.00
IUUC-Ptr-091213	Pan troglodytes	30.28	1.00e-72	268.00
IUUC-Pan-092734	Papio anubis	31.40	2.00e-78	287.00
IUUC-Psi-093271	Pelodiscus sinensis	31.55	6.00e-69	256.00
IUUC-Pma-094427	Petromyzon marinus	32.12	4.00e-36	144.00
IUUC-Ppa-095793	Physcomitrella patens	54.58	0.00e+00	884.00
IUUC-Pfo-096191	Poecilia formosa	31.60	4.00e-76	279.00
IUUC-Pab-098402	Pongo abelii	31.55	2.00e-78	286.00
IUUC-Pop-099185	Populus trichocarpa	64.42	0.00e+00	1245.00
IUUC-Pca-101128	Procavia capensis	33.20	1.00e-65	244.00
IUUC-Ppe-101849	Prunus persica	54.45	0.00e+00	1674.00
IUUC-Pva-102512	Pteropus vampyrus	30.10	1.00e-70	261.00
IUUC-Rno-105797	Rattus norvegicus	29.81	5.00e-71	262.00
IUUC-Sha-106680	Sarcophilus harrisii	26.93	4.00e-48	186.00
IUUC-Sit-110017	Setaria italica	51.33	0.00e+00	868.00
IUUC-Sly-111348	Solanum lycopersicum	69.86	0.00e+00	1056.00
IUUC-Sar-113004	Sorex araneus	29.14	2.00e-62	234.00
IUUC-Sbi-114195	Sorghum bicolor	73.08	0.00e+00	878.00
IUUC-Ssc-115461	Sus scrofa	30.59	4.00e-66	246.00
IUUC-Tgu-116821	Taeniopygia guttata	31.28	4.00e-42	166.00
IUUC-Tru-117625	Takifugu rubripes	31.70	3.00e-76	279.00
IUUC-Tsy-119003	Tarsius syrichta	29.80	1.00e-59	224.00
IUUC-Tni-120716	Tetraodon nigroviridis	31.84	4.00e-76	279.00
IUUC-Tca-121098	Theobroma cacao	62.58	0.00e+00	1272.00
IUUC-Tae-125478	Triticum aestivum	59.61	0.00e+00	1139.00
IUUC-Tur-126809	Triticum urartu	57.84	0.00e+00	1126.00
IUUC-Tbe-127479	Tupaia belangeri	39.55	3.00e-31	130.00
IUUC-Ttr-128427	Tursiops truncatus	31.25	4.00e-70	259.00
IUUC-Vpa-130160	Vicugna pacos	31.06	8.00e-70	258.00
IUUC-Vvi-131362	Vitis vinifera	58.83	0.00e+00	1795.00
IUUC-Xtr-132717	Xenopus tropicalis	31.31	3.00e-77	283.00
IUUC-Xma-134120	Xiphophorus maculatus	31.46	1.00e-75	276.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence