iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021363

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02047258

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005737.3	ENSCPOT00000005799.2	ENSCPOP00000005174.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-18	65.4	227	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +lvs++dD+++k WD+r
   Q: 227  HGQLVRDLDFnPNkqYYLVSCGDDCKVKFWDTR 259
           8999*******555899**************86 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHQAGEIWHI SASPADKGVL ATCYNRTSDS RVLGCAAVWR MPKDLESSGQ ESPDDSASTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGATG ATGCACCGGT GATCTACGGT CTGGAGTTCC AGGTGGGCTG CGAGAGGGCG 60
GCAGATGTGC CCATCCTGCT CCCTGACGGC ACGCGGGGTC TCACGAGGGC TTGCGGTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	34.62	8.00e-41	160.00
IUUC-Aml-002348	Ailuropoda melanoleuca	91.53	8.00e-126	442.00
IUUC-Atr-003028	Amborella trichopoda	33.15	3.00e-52	198.00
IUUC-Apl-004211	Anas platyrhynchos	79.52	2.00e-176	611.00
IUUC-Aca-004893	Anolis carolinensis	87.60	0.00e+00	665.00
IUUC-Aly-005975	Arabidopsis lyrata	33.51	3.00e-51	195.00
IUUC-Ath-006902	Arabidopsis thaliana	34.58	1.00e-51	196.00
IUUC-Ame-010619	Astyanax mexicanus	84.50	0.00e+00	647.00
IUUC-Bta-013035	Bos taurus	88.11	0.00e+00	687.00
IUUC-Bdi-014619	Brachypodium distachyon	33.95	1.00e-53	203.00
IUUC-Bol-016581	Brassica oleracea	32.80	4.00e-52	198.00
IUUC-Bra-017885	Brassica rapa	33.16	1.00e-51	196.00
IUUC-Cel-018344	Caenorhabditis elegans	35.42	1.00e-56	213.00
IUUC-Cja-018975	Callithrix jacchus	85.75	0.00e+00	678.00
IUUC-Cfa-020214	Canis familiaris	88.89	0.00e+00	651.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	26.18	1.00e-35	143.00
IUUC-Csa-023240	Chlorocebus sabaeus	93.02	0.00e+00	664.00
IUUC-Cho-024713	Choloepus hoffmanni	84.54	4.00e-176	610.00
IUUC-Cin-025678	Ciona intestinalis	46.91	3.00e-104	371.00
IUUC-Csv-026022	Ciona savignyi	47.44	2.00e-103	369.00
IUUC-Dre-027817	Danio rerio	82.69	0.00e+00	673.00
IUUC-Dno-030097	Dasypus novemcinctus	92.25	0.00e+00	666.00
IUUC-Dme-031866	Drosophila melanogaster	38.71	8.00e-75	273.00
IUUC-Ete-032575	Echinops telfairi	78.12	2.00e-133	468.00
IUUC-Eca-034323	Equus caballus	90.11	7.00e-139	486.00
IUUC-Eeu-035217	Erinaceus europaeus	70.03	5.00e-137	480.00
IUUC-Fca-035709	Felis catus	88.48	3.00e-166	577.00
IUUC-Fal-036989	Ficedula albicollis	87.34	0.00e+00	650.00
IUUC-Gmo-038623	Gadus morhua	71.39	3.00e-157	547.00
IUUC-Gga-040157	Gallus gallus	87.86	0.00e+00	656.00
IUUC-Gac-041368	Gasterosteus aculeatus	61.73	5.00e-112	397.00
IUUC-Gma-044196	Glycine max	32.35	1.00e-49	189.00
IUUC-Ggo-044513	Gorilla gorilla	87.14	0.00e+00	650.00
IUUC-Hsa-046844	Homo sapiens	86.71	0.00e+00	649.00
IUUC-Hvu-047435	Hordeum vulgare	35.28	1.00e-54	206.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	92.68	9.00e-149	518.00
IUUC-Lch-049696	Latimeria chalumnae	86.30	0.00e+00	660.00
IUUC-Lpe-050988	Leersia perrieri	33.56	3.00e-41	162.00
IUUC-Loc-052440	Lepisosteus oculatus	85.31	0.00e+00	650.00
IUUC-Laf-054088	Loxodonta africana	90.70	0.00e+00	647.00
IUUC-Mcc-055575	Macaca mulatta	85.92	2.00e-180	625.00
IUUC-Meu-056807	Macropus eugenii	66.67	4.00e-135	474.00
IUUC-Mtr-058599	Medicago truncatula	33.69	1.00e-51	196.00
IUUC-Mga-059336	Meleagris gallopavo	85.27	3.00e-177	613.00
IUUC-Mmr-061706	Microcebus murinus	92.51	0.00e+00	674.00
IUUC-Mdo-062736	Monodelphis domestica	89.41	0.00e+00	631.00
IUUC-Mmu-064265	Mus musculus	91.73	0.00e+00	708.00
IUUC-Mac-065342	Musa acuminata	33.07	2.00e-51	195.00
IUUC-Mpu-066514	Mustela putorius furo	88.37	0.00e+00	679.00
IUUC-Mlu-067072	Myotis lucifugus	91.37	1.00e-108	385.00
IUUC-Nle-069307	Nomascus leucogenys	83.57	1.00e-176	612.00
IUUC-Opr-070283	Ochotona princeps	71.83	7.00e-143	499.00
IUUC-Ont-072532	Oreochromis niloticus	82.43	5.00e-176	610.00
IUUC-Oan-073222	Ornithorhynchus anatinus	86.96	6.00e-180	622.00
IUUC-Oba-075849	Oryza barthii	34.62	2.00e-42	166.00
IUUC-Obr-076488	Oryza brachyantha	32.66	4.00e-47	181.00
IUUC-Ogl-077928	Oryza glaberrima	34.92	4.00e-45	175.00
IUUC-Ogu-077997	Oryza glumaepatula	34.62	1.00e-42	167.00
IUUC-Oin-079848	Oryza indica	34.92	9.00e-45	174.00
IUUC-Oni-082492	Oryza nivara	34.62	1.00e-42	167.00
IUUC-Oru-085119	Oryza rufipogon	34.62	1.00e-42	167.00
IUUC-Osa-086152	Oryza sativa	34.92	4.00e-45	175.00
IUUC-Ola-086694	Oryzias latipes	72.79	6.00e-175	606.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.33	1.00e-25	108.00
IUUC-Oga-088180	Otolemur garnettii	89.67	6.00e-141	493.00
IUUC-Oar-089621	Ovis aries	68.33	4.00e-133	467.00
IUUC-Ptr-091053	Pan troglodytes	88.11	0.00e+00	643.00
IUUC-Pan-091918	Papio anubis	92.76	0.00e+00	663.00
IUUC-Psi-093545	Pelodiscus sinensis	87.34	0.00e+00	642.00
IUUC-Pma-094439	Petromyzon marinus	72.52	2.00e-162	565.00
IUUC-Pfo-096127	Poecilia formosa	83.20	0.00e+00	639.00
IUUC-Pab-097916	Pongo abelii	83.57	0.00e+00	636.00
IUUC-Pop-098864	Populus trichocarpa	32.45	3.00e-50	192.00
IUUC-Pca-100797	Procavia capensis	77.78	3.00e-118	418.00
IUUC-Ppe-101796	Prunus persica	34.23	7.00e-53	200.00
IUUC-Pva-103228	Pteropus vampyrus	80.19	1.00e-178	619.00
IUUC-Rno-104877	Rattus norvegicus	92.25	0.00e+00	677.00
IUUC-Sha-106940	Sarcophilus harrisii	88.14	0.00e+00	666.00
IUUC-Smo-109355	Selaginella moellendorffii	33.42	9.00e-57	213.00
IUUC-Sit-109958	Setaria italica	34.95	7.00e-56	211.00
IUUC-Sly-111871	Solanum lycopersicum	32.80	2.00e-51	196.00
IUUC-Stu-112128	Solanum tuberosum	31.71	3.00e-47	182.00
IUUC-Sar-113084	Sorex araneus	73.25	2.00e-107	382.00
IUUC-Sbi-114122	Sorghum bicolor	34.75	2.00e-54	206.00
IUUC-Ssc-115385	Sus scrofa	86.30	0.00e+00	637.00
IUUC-Tgu-117090	Taeniopygia guttata	84.45	4.00e-179	620.00
IUUC-Tru-118548	Takifugu rubripes	74.22	8.00e-176	609.00
IUUC-Tsy-119435	Tarsius syrichta	87.44	0.00e+00	626.00
IUUC-Tni-120311	Tetraodon nigroviridis	71.21	9.00e-152	529.00
IUUC-Tca-121141	Theobroma cacao	32.43	2.00e-49	189.00
IUUC-Tae-122717	Triticum aestivum	35.28	1.00e-54	206.00
IUUC-Tbe-127623	Tupaia belangeri	65.95	7.00e-114	403.00
IUUC-Ttr-128706	Tursiops truncatus	75.97	5.00e-153	533.00
IUUC-Vvi-130871	Vitis vinifera	33.87	1.00e-49	190.00
IUUC-Xtr-131950	Xenopus tropicalis	83.20	0.00e+00	638.00
IUUC-Xma-133364	Xiphophorus maculatus	82.43	0.00e+00	635.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence