iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040452

UUCD1 version

UUC-GaG-00372

Ensembl Protein ID

ENSGALP00000056907.1

UniProt Accession

A0A1D5PVE1; A0A1D5PVE1_CHICK

Genbank Protein ID

ENSGALP00000056907

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000304

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000033203.2	ENSGALT00000068606.1	ENSGALP00000056907.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-09	37.4	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C + +                 s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCANDVfqasnplwqsrGSGAGPSGGRFRCPSCR 82
           *************************8777777788899995555569*********8 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MNFAVGLKPL LAEARSMESL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSGAG PSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESARPLHAKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGTGCGGG GCCGGAGAGG TACCGGAGAG GTACCGGGAC CGCGGAGATG AACTTCGCGG 60
TGGGGCTGAA GCCGCTGCTG GCGGAAGCGC GGAGCATGGA GAGCTTGGAG AAACAGCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0070507--P:regulation of microtubule cytoskeleton organization

KEGG

gga:107053153

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	80.80	5.00e-117	413.00
IUUC-Bta-013385	Bos taurus	81.52	3.00e-154	537.00
IUUC-Cfa-020995	Canis familiaris	81.52	4.00e-147	513.00
IUUC-Cpo-021913	Cavia porcellus	77.60	1.00e-158	552.00
IUUC-Csa-023342	Chlorocebus sabaeus	78.53	5.00e-151	526.00
IUUC-Cin-025224	Ciona intestinalis	50.48	9.00e-94	337.00
IUUC-Csv-026374	Ciona savignyi	52.67	8.00e-83	299.00
IUUC-Dre-027562	Danio rerio	69.41	2.00e-145	508.00
IUUC-Dno-029582	Dasypus novemcinctus	80.24	1.00e-147	515.00
IUUC-Dor-031139	Dipodomys ordii	82.12	8.00e-161	559.00
IUUC-Eca-033645	Equus caballus	81.02	2.00e-154	538.00
IUUC-Fca-035865	Felis catus	81.52	2.00e-158	551.00
IUUC-Fal-036978	Ficedula albicollis	91.58	0.00e+00	689.00
IUUC-Ggo-044467	Gorilla gorilla	72.19	3.00e-144	504.00
IUUC-Hsa-046379	Homo sapiens	81.33	6.00e-150	523.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	82.12	5.00e-157	546.00
IUUC-Lch-050029	Latimeria chalumnae	80.49	1.00e-157	548.00
IUUC-Loc-051801	Lepisosteus oculatus	78.89	3.00e-133	467.00
IUUC-Laf-054215	Loxodonta africana	81.74	2.00e-163	568.00
IUUC-Mcc-055027	Macaca mulatta	70.45	1.00e-145	509.00
IUUC-Meu-056412	Macropus eugenii	82.67	1.00e-148	518.00
IUUC-Mmr-060920	Microcebus murinus	78.53	3.00e-155	540.00
IUUC-Mdo-062832	Monodelphis domestica	81.76	3.00e-147	514.00
IUUC-Mmu-063707	Mus musculus	81.52	1.00e-153	535.00
IUUC-Mlu-067653	Myotis lucifugus	67.48	3.00e-117	414.00
IUUC-Nle-069020	Nomascus leucogenys	78.41	2.00e-152	531.00
IUUC-Opr-070577	Ochotona princeps	66.31	1.00e-124	439.00
IUUC-Ont-072491	Oreochromis niloticus	62.76	3.00e-121	427.00
IUUC-Oan-073101	Ornithorhynchus anatinus	83.33	2.00e-155	541.00
IUUC-Ocu-074454	Oryctolagus cuniculus	81.12	5.00e-155	540.00
IUUC-Oga-088361	Otolemur garnettii	81.44	2.00e-151	528.00
IUUC-Oar-089950	Ovis aries	69.70	4.00e-123	434.00
IUUC-Ptr-090785	Pan troglodytes	72.19	7.00e-144	503.00
IUUC-Pan-092344	Papio anubis	78.81	7.00e-152	529.00
IUUC-Pab-098322	Pongo abelii	75.85	6.00e-144	503.00
IUUC-Rno-105134	Rattus norvegicus	76.80	7.00e-163	566.00
IUUC-Sha-106768	Sarcophilus harrisii	82.07	6.00e-159	553.00
IUUC-Tgu-117494	Taeniopygia guttata	90.68	5.00e-173	599.00
IUUC-Tme-126931	Tuber melanosporum	37.65	3.00e-08	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence