iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108025

Ensembl Protein ID

SPAC23H3.05c.1:pep

UniProt Accession

O42858; SWD1_SCHPO

Genbank Protein ID

CAB16241.2

Protein Name

Set1 complex component swd1; COMPASS component swd1; Complex proteins associated with set1 protein swd1

Genbank Nucleotide ID

CU329670

Gene Name

swd1; SPAC23H3.05c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC23H3.05c	SPAC23H3.05c.1	SPAC23H3.05c.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-10	39.1	64	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gHt  + ++++   d++l+++s+D ++ +WDlr+g  +
   Q: 64   GHTRAIQSVCWssCDRFLLTASRDWKCILWDLRDGSIV 101
           8**********95449********99********9865 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

The Set1 complex specifically methylates 'Lys-4' of histone H3.

Protein Sequence
(Fasta)

MNLELLDPFS IPDYPEALTT TLKHGHATSI RFSTNGYHLA SGLVNGSVVI WDLSTFSVSR 60
VLTGHTRAIQ SVCWSSCDRF LLTASRDWKC ILWDLRDGSI VYQVVLSAPV WSASLHPHKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAACACTTA ACCAACAACA CCAAGTGTCG GTATTTGTTT CACTCACAGT GTTATTATAG 60
AATTCGAGTG AGACTAACTG GTTCCTCTGC AATTTTAAAC ACCCCCTTGA AGAATGTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0048188--C:Set1C/COMPASS complex
GO:0000922--C:spindle pole
GO:0070869--P:heterochromatin assembly involved in chromatin silencing
GO:0051568--P:histone H3-K4 methylation

KEGG

spo:SPAC23H3.05c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	33.00	8.00e-42	163.00
IUUC-Aml-002118	Ailuropoda melanoleuca	33.82	7.00e-47	179.00
IUUC-Atr-002777	Amborella trichopoda	32.68	8.00e-38	149.00
IUUC-Apl-004056	Anas platyrhynchos	34.11	4.00e-47	180.00
IUUC-Aca-004999	Anolis carolinensis	33.53	3.00e-47	181.00
IUUC-Aly-005719	Arabidopsis lyrata	33.09	2.00e-44	171.00
IUUC-Ath-006947	Arabidopsis thaliana	33.09	1.00e-44	172.00
IUUC-Ago-007753	Ashbya gossypii	38.44	5.00e-60	223.00
IUUC-Acl-008105	Aspergillus clavatus	45.79	3.00e-87	313.00
IUUC-Afl-008633	Aspergillus flavus	46.59	1.00e-89	321.00
IUUC-Afu-009075	Aspergillus fumigatus	42.94	8.00e-55	205.00
IUUC-Ani-009233	Aspergillus nidulans	45.77	3.00e-91	327.00
IUUC-Ang-009695	Aspergillus niger	49.35	2.00e-90	323.00
IUUC-Aor-009988	Aspergillus oryzae	46.59	1.00e-89	321.00
IUUC-Ate-010313	Aspergillus terreus	46.26	2.00e-90	324.00
IUUC-Ame-011134	Astyanax mexicanus	31.40	6.00e-38	150.00
IUUC-Bgr-012302	Blumeria graminis	46.42	1.00e-86	311.00
IUUC-Bta-012946	Bos taurus	34.65	2.00e-49	188.00
IUUC-Bci-013968	Botrytis cinerea	46.77	6.00e-85	305.00
IUUC-Bdi-014387	Brachypodium distachyon	33.60	2.00e-40	158.00
IUUC-Bra-017414	Brassica rapa	34.73	5.00e-47	180.00
IUUC-Cel-018610	Caenorhabditis elegans	30.95	3.00e-44	170.00
IUUC-Cja-019938	Callithrix jacchus	33.24	8.00e-47	179.00
IUUC-Cfa-020726	Canis familiaris	33.52	1.00e-47	182.00
IUUC-Cpo-021560	Cavia porcellus	31.73	2.00e-41	160.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	47.32	6.00e-20	89.70
IUUC-Csa-024192	Chlorocebus sabaeus	34.65	2.00e-49	188.00
IUUC-Cho-024355	Choloepus hoffmanni	34.08	2.00e-49	188.00
IUUC-Cin-025285	Ciona intestinalis	34.84	1.00e-54	205.00
IUUC-Csv-026366	Ciona savignyi	35.98	1.00e-55	208.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	42.97	5.00e-78	283.00
IUUC-Cne-027092	Cryptococcus neoformans	33.42	4.00e-53	200.00
IUUC-Cme-027137	Cyanidioschyzon merolae	31.02	2.00e-15	75.50
IUUC-Dre-027374	Danio rerio	34.37	3.00e-49	187.00
IUUC-Dno-030003	Dasypus novemcinctus	32.56	3.00e-43	167.00
IUUC-Dor-030355	Dipodomys ordii	34.65	2.00e-49	187.00
IUUC-Dse-031442	Dothistroma septosporum	49.34	2.00e-89	320.00
IUUC-Dme-031932	Drosophila melanogaster	36.16	4.00e-54	203.00
IUUC-Ete-032858	Echinops telfairi	34.31	4.00e-36	143.00
IUUC-Eca-034217	Equus caballus	34.65	1.00e-49	188.00
IUUC-Eeu-035024	Erinaceus europaeus	34.37	4.00e-49	187.00
IUUC-Fca-035370	Felis catus	33.82	7.00e-47	179.00
IUUC-Fal-036628	Ficedula albicollis	33.54	7.00e-46	176.00
IUUC-Fox-037739	Fusarium oxysporum	42.75	1.00e-81	295.00
IUUC-Fso-038094	Fusarium solani	42.82	1.00e-80	291.00
IUUC-Gmo-039088	Gadus morhua	33.33	1.00e-46	178.00
IUUC-Ggr-040063	Gaeumannomyces graminis	40.81	8.00e-82	295.00
IUUC-Gga-041160	Gallus gallus	34.93	8.00e-50	189.00
IUUC-Gac-041333	Gasterosteus aculeatus	32.94	6.00e-47	179.00
IUUC-Gma-044101	Glycine max	34.38	8.00e-50	189.00
IUUC-Ggo-044657	Gorilla gorilla	34.65	2.00e-49	188.00
IUUC-Hsa-045894	Homo sapiens	34.65	2.00e-49	188.00
IUUC-Hvu-047662	Hordeum vulgare	33.09	7.00e-43	166.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	33.84	6.00e-46	176.00
IUUC-Kpa-049095	Komagataella pastoris	42.74	8.00e-76	275.00
IUUC-Lch-049495	Latimeria chalumnae	31.71	6.00e-30	123.00
IUUC-Lpe-051038	Leersia perrieri	33.17	9.00e-39	152.00
IUUC-Loc-052680	Lepisosteus oculatus	35.49	6.00e-51	192.00
IUUC-Laf-053717	Loxodonta africana	33.24	8.00e-47	179.00
IUUC-Mcc-055007	Macaca mulatta	33.84	7.00e-46	176.00
IUUC-Meu-056494	Macropus eugenii	49.43	2.00e-13	68.20
IUUC-Mor-057173	Magnaporthe oryzae	44.08	1.00e-83	301.00
IUUC-Mpo-057622	Magnaporthe poae	41.06	4.00e-82	296.00
IUUC-Mtr-057672	Medicago truncatula	35.38	2.00e-50	191.00
IUUC-Mla-059057	Melampsora laricipopulina	33.42	4.00e-44	170.00
IUUC-Mga-060037	Meleagris gallopavo	33.62	5.00e-46	176.00
IUUC-Mvi-060321	Microbotryum violaceum	35.43	7.00e-55	206.00
IUUC-Mmr-060755	Microcebus murinus	33.84	7.00e-46	176.00
IUUC-Mdo-061859	Monodelphis domestica	34.93	7.00e-50	189.00
IUUC-Mmu-063755	Mus musculus	34.65	2.00e-49	188.00
IUUC-Mac-065292	Musa acuminata	35.56	4.00e-50	191.00
IUUC-Mpu-065896	Mustela putorius furo	34.08	2.00e-49	188.00
IUUC-Mlu-067927	Myotis lucifugus	33.82	7.00e-47	179.00
IUUC-Nfi-068429	Neosartorya fischeri	45.79	3.00e-88	317.00
IUUC-Ncr-068738	Neurospora crassa	44.76	1.00e-86	311.00
IUUC-Nle-069608	Nomascus leucogenys	34.65	2.00e-49	188.00
IUUC-Opr-070319	Ochotona princeps	32.36	9.00e-45	172.00
IUUC-Ont-071451	Oreochromis niloticus	34.93	3.00e-50	191.00
IUUC-Oan-073445	Ornithorhynchus anatinus	33.24	3.00e-46	177.00
IUUC-Ocu-074341	Oryctolagus cuniculus	34.65	2.00e-49	187.00
IUUC-Oba-075664	Oryza barthii	32.85	4.00e-43	167.00
IUUC-Obr-076630	Oryza brachyantha	32.69	3.00e-42	164.00
IUUC-Ogl-077847	Oryza glaberrima	32.85	4.00e-43	167.00
IUUC-Ogu-077970	Oryza glumaepatula	32.99	8.00e-38	149.00
IUUC-Oin-079374	Oryza indica	32.85	4.00e-43	167.00
IUUC-Olo-080992	Oryza longistaminata	32.85	6.00e-43	166.00
IUUC-Ome-081683	Oryza meridionalis	32.61	3.00e-42	164.00
IUUC-Oni-082594	Oryza nivara	32.85	4.00e-43	167.00
IUUC-Opu-083907	Oryza punctata	32.85	6.00e-43	166.00
IUUC-Oru-084400	Oryza rufipogon	32.85	4.00e-43	167.00
IUUC-Osa-085442	Oryza sativa	32.85	4.00e-43	167.00
IUUC-Ola-086569	Oryzias latipes	34.37	4.00e-50	190.00
IUUC-Oga-088947	Otolemur garnettii	31.78	2.00e-39	155.00
IUUC-Oar-090358	Ovis aries	33.82	1.00e-46	179.00
IUUC-Ptr-091601	Pan troglodytes	34.08	1.00e-49	188.00
IUUC-Pan-092466	Papio anubis	34.65	2.00e-49	188.00
IUUC-Psi-093614	Pelodiscus sinensis	34.11	4.00e-47	180.00
IUUC-Pma-094450	Petromyzon marinus	34.29	2.00e-47	181.00
IUUC-Pno-094819	Phaeosphaeria nodorum	45.29	7.00e-88	315.00
IUUC-Ppa-095157	Physcomitrella patens	31.36	1.00e-19	88.20
IUUC-Pfo-096312	Poecilia formosa	34.93	1.00e-50	192.00
IUUC-Pab-098058	Pongo abelii	34.65	2.00e-49	188.00
IUUC-Pop-099447	Populus trichocarpa	34.47	2.00e-48	185.00
IUUC-Pca-100623	Procavia capensis	34.65	2.00e-49	188.00
IUUC-Ppe-102053	Prunus persica	35.12	7.00e-51	192.00
IUUC-Pva-102779	Pteropus vampyrus	33.52	5.00e-48	183.00
IUUC-Pgr-103398	Puccinia graminis	33.87	3.00e-46	177.00
IUUC-Ptt-103912	Puccinia triticina	34.49	3.00e-46	177.00
IUUC-Pte-104246	Pyrenophora teres	47.04	1.00e-92	331.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	47.06	1.00e-92	331.00
IUUC-Rno-104838	Rattus norvegicus	34.65	2.00e-49	188.00
IUUC-Sce-106229	Saccharomyces cerevisiae	37.67	2.00e-54	204.00
IUUC-Sha-106527	Sarcophilus harrisii	34.93	7.00e-50	189.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	61.44	6.00e-140	488.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	46.77	2.00e-85	307.00
IUUC-Smo-109474	Selaginella moellendorffii	34.19	3.00e-39	154.00
IUUC-Sit-110485	Setaria italica	33.00	9.00e-43	166.00
IUUC-Sly-111597	Solanum lycopersicum	33.58	7.00e-42	162.00
IUUC-Stu-112389	Solanum tuberosum	33.58	8.00e-42	162.00
IUUC-Sar-113284	Sorex araneus	30.70	7.00e-37	146.00
IUUC-Sbi-114362	Sorghum bicolor	30.47	1.00e-39	155.00
IUUC-Sre-115146	Sporisorium reilianum	32.35	7.00e-53	199.00
IUUC-Ssc-115604	Sus scrofa	33.24	7.00e-47	179.00
IUUC-Tru-118258	Takifugu rubripes	34.37	4.00e-50	190.00
IUUC-Tsy-119169	Tarsius syrichta	31.89	5.00e-42	163.00
IUUC-Tni-119939	Tetraodon nigroviridis	34.27	3.00e-49	187.00
IUUC-Tca-121010	Theobroma cacao	36.19	2.00e-51	194.00
IUUC-Tre-121944	Trichoderma reesei	44.48	6.00e-81	292.00
IUUC-Tvi-122283	Trichoderma virens	45.30	8.00e-81	292.00
IUUC-Tur-126395	Triticum urartu	33.00	8.00e-41	159.00
IUUC-Tme-127150	Tuber melanosporum	44.29	3.00e-90	323.00
IUUC-Tbe-127745	Tupaia belangeri	26.32	1.00e-22	99.00
IUUC-Ttr-129187	Tursiops truncatus	34.65	2.00e-49	188.00
IUUC-Uma-129654	Ustilago maydis	30.02	1.00e-46	179.00
IUUC-Vda-129788	Verticillium dahliae	42.37	2.00e-83	301.00
IUUC-Vpa-130182	Vicugna pacos	34.16	3.00e-35	140.00
IUUC-Vvi-131557	Vitis vinifera	34.80	3.00e-48	184.00
IUUC-Xtr-132007	Xenopus tropicalis	34.37	2.00e-50	191.00
IUUC-Xma-133909	Xiphophorus maculatus	35.21	2.00e-50	191.00
IUUC-Yli-134524	Yarrowia lipolytica	47.31	8.00e-89	318.00
IUUC-Zma-134821	Zea mays	31.51	7.00e-42	163.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence