iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-119662

Ensembl Protein ID

ENSTNIP00000006265.1

UniProt Accession

H3CDE2; H3CDE2_TETNG

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000003669.1	ENSTNIT00000006414.1	ENSTNIP00000006265.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-17	63.2	416	456
UBD/Beta-Prp	3.40e-50	171.1	371	594

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++++cl      ++ + l +Gs D+t+++++++t+++l
   Q: 416  GHTNKINCLLVspalNTlPCLFTGSSDNTLRCYSIKTQNCL 456
           8*******954889887888******************997 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sg.dklvsGshdrtirvwdletgqcle 130
           l  +++h+++v+ ++  +d   l t+s D+t++ ++ls+++    ++gh++++ +l +sp  ++   l +Gs+d+t+r++ ++t+ cle
   Q: 371  LGAFENHQGPVYGLEVYQD--RLYTCSGDNTAHAYSLSNRDRQALFTGHTNKINCLLVSPalNTlPCLFTGSSDNTLRCYSIKTQNCLE 457
           77899**************..7***************************************9666***********************9 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvrt 217
            ++s  d   +++++h+  n+l++G   ++v  +dlkt k l+ +     + v +l   ++g  + l+ gs+d+t+ + d ++   +rt
   Q: 458  -VFSLSD---RVLCLHSAWNVLFAGLGSGAVASFDLKTLKQLDVFDCHGPRGVSCLGAAQEGarRVLLVGSYDSTISVRDARSCLLLRT 542
           .999999...677788877**************************886688899999999988899*********************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
           l+ght++v+++++   ++++ sgssD+s+  +++ +g+ll+ +++h + v+sv 
   Q: 543  LEGHTKTVLCMKVV--NDLVFSGSSDKSVHAHNIHTGKLLRIYEGHSHAVTSVV 594
           **************..9******************************9999986 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

DRDQMDQLLV VSLREEKLNN SIEDLDRSLL QARNTLQAAY AEVQRLLLLR QQYAADVNSL 60
RAKRIEILQL MQGPAFGLNS KTHLPFSLSC LSGGSSSSTG CPAAAAQPQV SPLSASSGLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAGGGACC AGATGGACCA GCTGCTGGTT GTTTCTTTAA GAGAGGAGAA GCTCAACAAC 60
TCCATTGAAG ACCTGGACAG ATCTTTGCTC CAGGCCCGGA ATACCTTGCA AGCTGCATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50294--WD_REPEATS_REGION
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gmo-038857	Gadus morhua	68.14	3.00e-154	538.00
IUUC-Gac-042155	Gasterosteus aculeatus	55.64	6.00e-166	577.00
IUUC-Ont-072462	Oreochromis niloticus	62.88	8.00e-173	600.00
IUUC-Ola-087573	Oryzias latipes	71.12	2.00e-166	578.00
IUUC-Tru-118722	Takifugu rubripes	80.00	2.00e-177	614.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence