iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000556

Ensembl Protein ID

EMT24746

UniProt Accession

M8CML7; M8CML7_AEGTA

Genbank Protein ID

EMT24746.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Genbank Nucleotide ID

KD516930

Gene Name

F775_18400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_18400	EMT24746	EMT24746

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-12	46.4	181	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDlrtgvll 36
           gHt+ v+++af   s+   +l+sG++D ++++WD+ tg ll
   Q: 181  GHTEFVSSIAFtshSGgsSFLLSGGGDSSVRLWDYITGCLL 221
           89**********99333589**************9998876 PP

Organism

Aegilops tauschii

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEDAAVEEAE VSGAGEFAPA LVAAHPLGNS VAVAVGPELR VFDLKGGCAV SLSDDSGGCS 60
HSDAIRAISF SADGALFASA GDDKLVKIWK TDSWRCIQTI TSEKRVSAVA ISKDGLYVTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACG CCGCGGTGGA GGAGGCGGAG GTGAGCGGCG CCGGCGAGTT CGCGCCGGCG 60
CTCGTCGCCG CCCACCCGCT CGGCAACTCC GTCGCCGTCG CCGTCGGGCC CGAGCTCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0539--Nucleus
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008618--P:7-methylguanosine metabolic process
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

ats:F775_18400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002431	Amborella trichopoda	51.94	3.00e-30	123.00
IUUC-Apl-003975	Anas platyrhynchos	26.34	5.00e-14	71.20
IUUC-Aca-005170	Anolis carolinensis	27.49	2.00e-13	69.30
IUUC-Aly-005769	Arabidopsis lyrata	48.13	1.00e-100	358.00
IUUC-Ath-006733	Arabidopsis thaliana	47.61	1.00e-96	345.00
IUUC-Ame-010613	Astyanax mexicanus	30.00	1.00e-16	80.10
IUUC-Bta-012788	Bos taurus	27.47	7.00e-18	84.30
IUUC-Bdi-014458	Brachypodium distachyon	83.18	2.00e-175	607.00
IUUC-Bol-015373	Brassica oleracea	49.88	5.00e-90	325.00
IUUC-Bra-016644	Brassica rapa	50.00	8.00e-94	338.00
IUUC-Cpo-021963	Cavia porcellus	30.88	8.00e-17	80.50
IUUC-Csa-024148	Chlorocebus sabaeus	31.94	1.00e-09	57.00
IUUC-Dre-028427	Danio rerio	30.00	8.00e-19	87.40
IUUC-Dor-030522	Dipodomys ordii	28.81	7.00e-18	84.00
IUUC-Fca-035833	Felis catus	26.96	6.00e-17	80.90
IUUC-Fal-037497	Ficedula albicollis	25.56	1.00e-13	70.50
IUUC-Gga-040547	Gallus gallus	25.37	1.00e-13	70.10
IUUC-Gac-041761	Gasterosteus aculeatus	26.79	6.00e-15	74.30
IUUC-Gma-043722	Glycine max	49.53	5.00e-97	347.00
IUUC-Ggo-045340	Gorilla gorilla	32.17	6.00e-10	57.80
IUUC-Hsa-046403	Homo sapiens	32.64	3.00e-10	58.90
IUUC-Hvu-047643	Hordeum vulgare	90.58	0.00e+00	697.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	29.31	3.00e-18	85.50
IUUC-Lch-050682	Latimeria chalumnae	26.97	2.00e-14	72.80
IUUC-Lpe-050712	Leersia perrieri	75.81	8.00e-177	612.00
IUUC-Loc-052599	Lepisosteus oculatus	27.97	3.00e-19	88.60
IUUC-Laf-054390	Loxodonta africana	27.62	2.00e-15	76.30
IUUC-Mcc-054747	Macaca mulatta	31.94	8.00e-10	57.40
IUUC-Mtr-058600	Medicago truncatula	49.28	4.00e-101	360.00
IUUC-Mla-059135	Melampsora laricipopulina	26.58	3.00e-13	69.70
IUUC-Mga-059876	Meleagris gallopavo	24.72	7.00e-14	70.90
IUUC-Mmr-061518	Microcebus murinus	27.16	1.00e-15	77.00
IUUC-Mac-065417	Musa acuminata	53.88	5.00e-114	403.00
IUUC-Nle-069914	Nomascus leucogenys	31.85	1.00e-08	53.90
IUUC-Ont-071555	Oreochromis niloticus	27.44	4.00e-12	65.10
IUUC-Oan-072951	Ornithorhynchus anatinus	26.61	1.00e-16	79.70
IUUC-Ocu-074679	Oryctolagus cuniculus	26.82	2.00e-12	66.20
IUUC-Oba-075355	Oryza barthii	73.03	1.00e-168	585.00
IUUC-Obr-076769	Oryza brachyantha	77.88	0.00e+00	675.00
IUUC-Ogl-077168	Oryza glaberrima	78.23	0.00e+00	648.00
IUUC-Ogu-078275	Oryza glumaepatula	72.79	3.00e-167	580.00
IUUC-Oin-079207	Oryza indica	78.23	0.00e+00	648.00
IUUC-Ome-081169	Oryza meridionalis	72.43	7.00e-162	563.00
IUUC-Oni-082437	Oryza nivara	72.55	3.00e-167	580.00
IUUC-Opu-084031	Oryza punctata	78.47	0.00e+00	650.00
IUUC-Oru-084380	Oryza rufipogon	72.79	1.00e-167	582.00
IUUC-Osa-085327	Oryza sativa	77.99	0.00e+00	646.00
IUUC-Ola-086716	Oryzias latipes	26.36	2.00e-14	72.80
IUUC-Olu-087708	Ostreococcus lucimarinus	27.11	9.00e-32	130.00
IUUC-Oar-090239	Ovis aries	27.47	1.00e-17	83.60
IUUC-Ptr-090851	Pan troglodytes	32.87	2.00e-10	59.70
IUUC-Pan-092558	Papio anubis	31.94	1.00e-09	57.00
IUUC-Ppa-095757	Physcomitrella patens	37.44	6.00e-66	243.00
IUUC-Pab-097722	Pongo abelii	33.09	3.00e-11	62.40
IUUC-Pop-098979	Populus trichocarpa	48.53	1.00e-100	358.00
IUUC-Ppe-101515	Prunus persica	54.36	1.00e-112	399.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	23.30	2.00e-16	79.30
IUUC-Smo-108938	Selaginella moellendorffii	39.40	1.00e-62	233.00
IUUC-Sit-110020	Setaria italica	77.55	0.00e+00	625.00
IUUC-Sly-111543	Solanum lycopersicum	48.28	2.00e-106	378.00
IUUC-Stu-111925	Solanum tuberosum	48.74	2.00e-107	381.00
IUUC-Sbi-114061	Sorghum bicolor	75.98	0.00e+00	632.00
IUUC-Tgu-117321	Taeniopygia guttata	26.18	6.00e-14	70.90
IUUC-Tru-118454	Takifugu rubripes	26.87	2.00e-14	72.80
IUUC-Tni-119894	Tetraodon nigroviridis	29.13	2.00e-12	65.90
IUUC-Tca-121746	Theobroma cacao	49.54	3.00e-105	374.00
IUUC-Tae-124114	Triticum aestivum	95.12	0.00e+00	724.00
IUUC-Tur-126254	Triticum urartu	94.02	0.00e+00	654.00
IUUC-Ttr-129056	Tursiops truncatus	33.33	8.00e-16	77.40
IUUC-Vvi-131428	Vitis vinifera	50.69	3.00e-113	401.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence