iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058600

Ensembl Protein ID

KEH23785

UniProt Accession

A0A072UD69; A0A072UD69_MEDTR

Genbank Protein ID

KEH23785.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g095190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g095190	KEH23786	KEH23786
MTR_7g095190	KEH23785	KEH23785

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-20	71.3	196	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ v+claf      +  ll+sGs+D t+++WD+++g ll
   Q: 196  GHTEFVSCLAFvpaqenPHSLLLSGSGDSTVRLWDITSGALL 237
           8*************9854489****************99876 PP

Organism

Medicago truncatula

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MDEEVAASES RKETTEVAPA LIAVHPDGHH VAVAVGPDLR VFNFLSNSAV SLLDESVNQP 60
FHKDNIRAIR FGAKGKLFVS AGDDKTLKIW SPENWKCIST VLSEKRVTAV AISNDGLYVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAATTGGA AGAAATTTGG AGCATCGAAG TAAAGCGGCA AACCCTAAAA CGAAGTTTCA 60
AACTGTAGCA ACAATGGACG AAGAAGTTGC AGCATCAGAA AGCAGAAAAG AAACCACCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008168--F:methyltransferase activity
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

mtr:MTR_7g095190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	48.43	8.00e-94	336.00
IUUC-Atr-002431	Amborella trichopoda	56.80	5.00e-37	145.00
IUUC-Apl-003975	Anas platyrhynchos	33.33	7.00e-28	117.00
IUUC-Aca-005170	Anolis carolinensis	30.90	1.00e-18	87.00
IUUC-Aly-005769	Arabidopsis lyrata	59.86	3.00e-137	481.00
IUUC-Ath-006733	Arabidopsis thaliana	60.35	3.00e-132	464.00
IUUC-Ame-010613	Astyanax mexicanus	34.87	3.00e-22	98.60
IUUC-Bgr-012067	Blumeria graminis	33.33	3.00e-12	65.90
IUUC-Bta-012788	Bos taurus	37.84	6.00e-24	104.00
IUUC-Bdi-014458	Brachypodium distachyon	50.36	8.00e-102	363.00
IUUC-Bol-016398	Brassica oleracea	62.47	1.00e-133	469.00
IUUC-Bra-016644	Brassica rapa	61.20	7.00e-137	481.00
IUUC-Cpo-021963	Cavia porcellus	34.86	2.00e-24	105.00
IUUC-Csa-024148	Chlorocebus sabaeus	35.91	1.00e-17	83.60
IUUC-Cne-026834	Cryptococcus neoformans	29.74	1.00e-16	80.90
IUUC-Dre-028427	Danio rerio	38.91	3.00e-27	115.00
IUUC-Dor-030522	Dipodomys ordii	37.38	3.00e-24	105.00
IUUC-Dme-032136	Drosophila melanogaster	30.11	2.00e-15	76.30
IUUC-Fca-035833	Felis catus	37.43	5.00e-23	101.00
IUUC-Fal-037497	Ficedula albicollis	33.47	1.00e-27	116.00
IUUC-Gga-040547	Gallus gallus	34.30	6.00e-26	111.00
IUUC-Gac-041761	Gasterosteus aculeatus	35.26	2.00e-23	102.00
IUUC-Gma-043722	Glycine max	80.10	0.00e+00	646.00
IUUC-Ggo-045340	Gorilla gorilla	35.39	3.00e-16	79.00
IUUC-Hsa-046403	Homo sapiens	35.96	2.00e-17	83.20
IUUC-Hvu-047643	Hordeum vulgare	50.60	6.00e-107	380.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	32.37	1.00e-24	106.00
IUUC-Kpa-049283	Komagataella pastoris	32.24	7.00e-19	87.80
IUUC-Lch-050682	Latimeria chalumnae	33.33	3.00e-28	119.00
IUUC-Lpe-050712	Leersia perrieri	49.29	2.00e-107	382.00
IUUC-Loc-052599	Lepisosteus oculatus	35.37	3.00e-29	122.00
IUUC-Laf-054390	Loxodonta africana	36.52	1.00e-25	109.00
IUUC-Mcc-054747	Macaca mulatta	35.91	9.00e-18	84.00
IUUC-Mla-059135	Melampsora laricipopulina	29.49	4.00e-18	85.50
IUUC-Mga-059876	Meleagris gallopavo	32.37	6.00e-27	114.00
IUUC-Mvi-060359	Microbotryum violaceum	30.13	7.00e-14	71.60
IUUC-Mmr-061518	Microcebus murinus	37.84	3.00e-24	105.00
IUUC-Mac-065625	Musa acuminata	54.61	1.00e-113	402.00
IUUC-Nle-069914	Nomascus leucogenys	37.02	3.00e-14	72.40
IUUC-Ont-071555	Oreochromis niloticus	34.72	2.00e-23	103.00
IUUC-Oan-072951	Ornithorhynchus anatinus	31.69	1.00e-25	109.00
IUUC-Ocu-074679	Oryctolagus cuniculus	35.11	3.00e-18	85.50
IUUC-Oba-075355	Oryza barthii	46.57	6.00e-97	347.00
IUUC-Obr-076769	Oryza brachyantha	51.90	2.00e-116	411.00
IUUC-Ogl-077168	Oryza glaberrima	51.42	1.00e-114	405.00
IUUC-Ogu-078275	Oryza glumaepatula	46.34	8.00e-96	343.00
IUUC-Oin-079207	Oryza indica	51.42	1.00e-114	405.00
IUUC-Ome-081169	Oryza meridionalis	59.03	1.00e-43	170.00
IUUC-Oni-082437	Oryza nivara	47.03	1.00e-97	349.00
IUUC-Opu-084031	Oryza punctata	51.66	3.00e-113	401.00
IUUC-Oru-084380	Oryza rufipogon	46.81	1.00e-97	349.00
IUUC-Osa-085327	Oryza sativa	51.66	2.00e-115	408.00
IUUC-Ola-086716	Oryzias latipes	36.70	7.00e-26	110.00
IUUC-Olu-087708	Ostreococcus lucimarinus	34.22	2.00e-37	149.00
IUUC-Oar-090239	Ovis aries	37.84	5.00e-24	104.00
IUUC-Ptr-090851	Pan troglodytes	35.39	3.00e-16	79.00
IUUC-Pan-092558	Papio anubis	35.91	1.00e-17	83.60
IUUC-Psi-093792	Pelodiscus sinensis	28.16	2.00e-23	102.00
IUUC-Ppa-095757	Physcomitrella patens	40.43	8.00e-76	276.00
IUUC-Pfo-096465	Poecilia formosa	34.51	4.00e-23	101.00
IUUC-Pab-097722	Pongo abelii	34.83	4.00e-17	81.60
IUUC-Pop-098979	Populus trichocarpa	57.27	1.00e-131	462.00
IUUC-Pca-100753	Procavia capensis	51.06	6.00e-18	84.30
IUUC-Ppe-101515	Prunus persica	63.82	3.00e-147	514.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	27.82	2.00e-15	76.30
IUUC-Smo-108938	Selaginella moellendorffii	39.50	4.00e-67	248.00
IUUC-Sit-110020	Setaria italica	49.64	1.00e-108	386.00
IUUC-Sly-111543	Solanum lycopersicum	59.33	7.00e-138	483.00
IUUC-Stu-111925	Solanum tuberosum	59.81	4.00e-141	494.00
IUUC-Sbi-114061	Sorghum bicolor	49.64	2.00e-110	392.00
IUUC-Tgu-117321	Taeniopygia guttata	30.92	2.00e-22	99.40
IUUC-Tru-118454	Takifugu rubripes	35.50	3.00e-27	115.00
IUUC-Tni-119894	Tetraodon nigroviridis	35.00	2.00e-23	102.00
IUUC-Tca-121746	Theobroma cacao	63.19	6.00e-148	516.00
IUUC-Tae-124114	Triticum aestivum	51.81	6.00e-107	380.00
IUUC-Tur-126254	Triticum urartu	45.76	1.00e-82	299.00
IUUC-Tbe-127683	Tupaia belangeri	54.12	4.00e-18	85.10
IUUC-Ttr-129056	Tursiops truncatus	38.50	1.00e-24	107.00
IUUC-Vvi-131428	Vitis vinifera	64.06	6.00e-159	553.00
IUUC-Xma-133605	Xiphophorus maculatus	34.07	4.00e-22	98.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence