iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-120289

Ensembl Protein ID

ENSTNIP00000006981.1

UniProt Accession

H3CFF7; H3CFF7_TETNG

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000004346.1	ENSTNIT00000007135.1	ENSTNIP00000006981.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.90e-17	62.4	218	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 218  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 263
           79*********....9******************.*******7.******86 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

DGAMKEPKSS SQLMQEWGLE DVQYGFTEDD YRTITNYKAF SQFLRPLIAK KNPKIPMSKM 60
MTVLGAKWRE FSANNPFKGT SATAVAAAVA AAVETVTVAQ ATGVSGSQPA SQLGPVKKAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGGCGCCA TGAAAGTGAG TGTGGCCCCA GCTGGGCAGG ACACTTTTAA AGAGTCCCAC 60
TAACTGCACC CCCACTAGTT CAGCCCCCAA GTTGCTGGTT CTAAACCCAC ACAGCACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50016--ZF_PHD_2

Pfam

PF08073--CHDNT
PF00385--Chromo
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025596	Ciona intestinalis	55.12	7.00e-63	234.00
IUUC-Dno-029923	Dasypus novemcinctus	79.06	0.00e+00	1472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence