iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005526

Ensembl Protein ID

scaffold_400057.1

UniProt Accession

D7LBC9; D7LBC9_ARALL

Genbank Protein ID

EFH54809.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_900556

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_400057.1	scaffold_400057.1	scaffold_400057.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-33	112.7	50	85
UBD/Beta-Prp	6.70e-62	210.0	3	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H+++v++++f s+ +l+vsG+dD +ikvW+++ +++
   Q: 50   HEGPVRGVHFhSSqPLFVSGGDDYKIKVWNYKLHRC 85
           9**********767****************876666 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           t +++++++++ + f+p++++++++  +g i++wd+++g+l+ ++ +he++v+ v f+++++++v+g++D+ ikvw+++   c+ tl gh d
   Q: 3    TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHSSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLD 94
           67889999************************************************************************************ PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...............ktgkll 172
           ++++++f+ ++ ++vs+s+d+tir+w++++++c++ +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+               ++ ++ 
   Q: 95   YIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIgalkkksaspaddlmRFSQMN 185
           ***********************************.****************************************9999999999444444 PP
   S: 173  rtl...........tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvr 229
            +l            +gh++ v++ sf+++ + +vsg++d++vklw + +++   v+tl  h +nv+sv 
   Q: 186  SDLfggvdaivkyvLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAweVDTLPSHMNNVSSVM 255
           44456666666666555********************************887778************985 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLSFHPK RPWILASLHS GVIQLWDYRM GTLIDRFDEH EGPVRGVHFH 60
SSQPLFVSGG DDYKIKVWNY KLHRCLFTLL GHLDYIRTVQ FHHENPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTAATGCT ACGGATCGTC ACCGTGAAGC TGAGCTTGAT CGCTTCCCCT TGTGAACTGA 60
TCTGATCTGA GGTGAATCTC TATTTCTTCT CCTTCTTCAT TGTTCGTATC TCGATTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

aly:ARALYDRAFT_900556

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007360	Arabidopsis thaliana	95.25	0.00e+00	2264.00
IUUC-Oan-073184	Ornithorhynchus anatinus	46.91	3.00e-67	247.00
IUUC-Oba-075761	Oryza barthii	74.53	0.00e+00	1904.00
IUUC-Obr-076429	Oryza brachyantha	74.94	0.00e+00	1913.00
IUUC-Sit-109697	Setaria italica	75.29	0.00e+00	1906.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence