iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068321

Ensembl Protein ID

CADNFIAP00000834

UniProt Accession

A1D4Z0; A1D4Z0_NEOFI

Genbank Protein ID

EAW23483.1

Protein Name

WD domain protein

Genbank Nucleotide ID

DS027688

Gene Name

NFIA_021920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00000873	CADNFIAT00000873	CADNFIAP00000834

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-46	152.8	421	459
UBD/Beta-Prp	5.20e-94	313.8	564	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  +++++a+ sd ++l+s+s +g++k+W++rt+ +l++
   Q: 421  GHRTDIRSIALsSDdRMLASAS-NGSLKIWNVRTQSCLRT 459
           79999******97756666666.89************985 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp. 104
           i ++ fspd +lla++  d+t+kv+ +++ kl+  l+gh+ +v  +++s d+k++vt+s D+t+++w l+ g+c  ++ +heds+++++f p 
   Q: 564  ILSLRFSPDARLLAVALLDNTVKVFFTDSLKLFLNLYGHKLPVLNMDISYDSKLIVTCSADKTVRLWGLDFGDCHKAFLAHEDSIMAVTFVPt 656
           44589***************************************************************************************9 PP
   S: 105  ....sgdklvsGshdrtirvwd 122
               +g+ + s+s+dr+i+ wd
   Q: 657  nkegNGHNFFSASKDRVIKYWD 678
           999999***************8 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MVKSYLKFEH SNTFGLVASG SSNAIWTRDD DLAGTARRTG AGRAIVGAGE EVLCWDVKKG 60
DLLGRWRDTS CKAQVTVITQ SKTDEDVFAV GYDDGSIRIW DSRTETVIIS FNGHKSAVTQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGT CATATTTGTA TGTGCAGCTT GTTTGGCAAA TTCGTGCATG GTGGACCCTT 60
GAACGCGAGG AGCTAATTTT TATAGGAAAT TCGAGCATTC GAATACGTTC GGGCTCGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

nfi:NFIA_021920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.71	1.00e-134	472.00
IUUC-Aml-001245	Ailuropoda melanoleuca	38.85	2.00e-177	614.00
IUUC-Atr-002700	Amborella trichopoda	36.95	2.00e-155	541.00
IUUC-Apl-004164	Anas platyrhynchos	39.29	2.00e-134	471.00
IUUC-Aca-004765	Anolis carolinensis	38.48	2.00e-174	604.00
IUUC-Aly-006503	Arabidopsis lyrata	35.83	6.00e-157	546.00
IUUC-Ath-006848	Arabidopsis thaliana	36.36	3.00e-160	557.00
IUUC-Ago-007909	Ashbya gossypii	40.76	0.00e+00	699.00
IUUC-Acl-008238	Aspergillus clavatus	91.99	0.00e+00	1767.00
IUUC-Afl-008544	Aspergillus flavus	85.92	0.00e+00	1620.00
IUUC-Afu-008868	Aspergillus fumigatus	98.12	0.00e+00	1853.00
IUUC-Ani-009367	Aspergillus nidulans	82.78	0.00e+00	1555.00
IUUC-Ang-009732	Aspergillus niger	86.29	0.00e+00	1665.00
IUUC-Aor-010140	Aspergillus oryzae	86.26	0.00e+00	1630.00
IUUC-Ate-010572	Aspergillus terreus	84.24	0.00e+00	1585.00
IUUC-Ame-010956	Astyanax mexicanus	37.33	2.00e-171	594.00
IUUC-Bgr-012296	Blumeria graminis	59.32	0.00e+00	1181.00
IUUC-Bta-012716	Bos taurus	38.82	0.00e+00	625.00
IUUC-Bci-013699	Botrytis cinerea	65.43	0.00e+00	1234.00
IUUC-Bdi-014525	Brachypodium distachyon	37.59	7.00e-149	519.00
IUUC-Bol-015117	Brassica oleracea	36.36	4.00e-154	537.00
IUUC-Bra-016869	Brassica rapa	36.05	5.00e-155	540.00
IUUC-Cel-018570	Caenorhabditis elegans	30.16	6.00e-102	363.00
IUUC-Cja-019425	Callithrix jacchus	38.60	0.00e+00	634.00
IUUC-Cfa-020787	Canis familiaris	39.09	3.00e-178	617.00
IUUC-Cpo-021729	Cavia porcellus	40.09	1.00e-143	501.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	40.33	5.00e-99	353.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.96	0.00e+00	635.00
IUUC-Cho-024495	Choloepus hoffmanni	40.46	6.00e-104	370.00
IUUC-Cin-025245	Ciona intestinalis	35.77	2.00e-99	354.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	62.92	0.00e+00	1184.00
IUUC-Cne-026835	Cryptococcus neoformans	43.09	0.00e+00	687.00
IUUC-Cme-027162	Cyanidioschyzon merolae	31.51	2.00e-35	143.00
IUUC-Dre-027874	Danio rerio	38.32	0.00e+00	636.00
IUUC-Dno-028905	Dasypus novemcinctus	38.85	3.00e-178	617.00
IUUC-Dor-030383	Dipodomys ordii	41.71	5.00e-65	241.00
IUUC-Dse-031297	Dothistroma septosporum	54.39	0.00e+00	1031.00
IUUC-Dme-031956	Drosophila melanogaster	32.32	2.00e-125	441.00
IUUC-Ete-032608	Echinops telfairi	37.12	8.00e-100	355.00
IUUC-Eca-034181	Equus caballus	38.80	2.00e-177	614.00
IUUC-Eeu-034495	Erinaceus europaeus	40.32	5.00e-176	609.00
IUUC-Fca-035994	Felis catus	39.96	8.00e-173	599.00
IUUC-Fal-036611	Ficedula albicollis	38.06	1.00e-172	598.00
IUUC-Fox-037807	Fusarium oxysporum	62.11	0.00e+00	1221.00
IUUC-Fso-038090	Fusarium solani	62.49	0.00e+00	1213.00
IUUC-Gmo-039018	Gadus morhua	33.58	6.00e-90	323.00
IUUC-Ggr-039748	Gaeumannomyces graminis	62.77	0.00e+00	1245.00
IUUC-Gga-040707	Gallus gallus	44.10	2.00e-132	465.00
IUUC-Gac-042334	Gasterosteus aculeatus	33.04	5.00e-78	283.00
IUUC-Gma-043033	Glycine max	37.80	7.00e-158	549.00
IUUC-Ggo-045334	Gorilla gorilla	38.54	1.00e-179	622.00
IUUC-Hsa-046996	Homo sapiens	38.65	3.00e-179	620.00
IUUC-Hvu-047381	Hordeum vulgare	35.43	2.00e-83	301.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.29	3.00e-175	607.00
IUUC-Kpa-049185	Komagataella pastoris	39.06	0.00e+00	663.00
IUUC-Lch-050098	Latimeria chalumnae	36.21	3.00e-159	553.00
IUUC-Lpe-050710	Leersia perrieri	34.78	1.00e-141	495.00
IUUC-Loc-052745	Lepisosteus oculatus	37.51	2.00e-168	584.00
IUUC-Lma-053104	Leptosphaeria maculans	61.94	0.00e+00	1171.00
IUUC-Laf-054395	Loxodonta africana	38.65	2.00e-177	614.00
IUUC-Mcc-055077	Macaca mulatta	38.85	0.00e+00	626.00
IUUC-Meu-056418	Macropus eugenii	41.27	2.00e-95	342.00
IUUC-Mor-057031	Magnaporthe oryzae	62.33	0.00e+00	1134.00
IUUC-Mpo-057420	Magnaporthe poae	63.42	0.00e+00	1227.00
IUUC-Mtr-057838	Medicago truncatula	38.08	7.00e-164	569.00
IUUC-Mla-058854	Melampsora laricipopulina	40.16	0.00e+00	681.00
IUUC-Mga-060120	Meleagris gallopavo	40.00	6.00e-132	463.00
IUUC-Mvi-060407	Microbotryum violaceum	51.85	2.00e-175	608.00
IUUC-Mmr-060635	Microcebus murinus	38.49	2.00e-175	608.00
IUUC-Mdo-063023	Monodelphis domestica	37.28	4.00e-174	603.00
IUUC-Mmu-064103	Mus musculus	38.99	0.00e+00	630.00
IUUC-Mac-065569	Musa acuminata	36.98	9.00e-152	529.00
IUUC-Mpu-066462	Mustela putorius furo	39.48	1.00e-178	618.00
IUUC-Mlu-067894	Myotis lucifugus	39.06	4.00e-178	617.00
IUUC-Ncr-068661	Neurospora crassa	62.76	0.00e+00	1212.00
IUUC-Nle-069409	Nomascus leucogenys	37.59	1.00e-169	588.00
IUUC-Opr-070445	Ochotona princeps	42.55	3.00e-128	451.00
IUUC-Ont-072339	Oreochromis niloticus	39.31	0.00e+00	628.00
IUUC-Oan-073688	Ornithorhynchus anatinus	38.84	2.00e-167	581.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.25	2.00e-177	614.00
IUUC-Oba-075635	Oryza barthii	35.53	5.00e-138	483.00
IUUC-Obr-076897	Oryza brachyantha	37.16	4.00e-148	516.00
IUUC-Ogl-077555	Oryza glaberrima	35.53	1.00e-137	482.00
IUUC-Ogu-078724	Oryza glumaepatula	35.83	2.00e-139	488.00
IUUC-Oin-080030	Oryza indica	36.15	1.00e-138	485.00
IUUC-Olo-080687	Oryza longistaminata	34.58	6.00e-128	450.00
IUUC-Ome-081867	Oryza meridionalis	36.05	5.00e-139	486.00
IUUC-Oni-082559	Oryza nivara	35.93	5.00e-139	486.00
IUUC-Opu-083332	Oryza punctata	40.86	5.00e-133	467.00
IUUC-Oru-084455	Oryza rufipogon	36.05	3.00e-138	484.00
IUUC-Osa-085793	Oryza sativa	36.05	3.00e-138	484.00
IUUC-Ola-087395	Oryzias latipes	38.05	7.00e-170	589.00
IUUC-Olu-087768	Ostreococcus lucimarinus	40.62	1.00e-111	395.00
IUUC-Oga-088574	Otolemur garnettii	38.83	2.00e-178	618.00
IUUC-Oar-089453	Ovis aries	38.64	2.00e-180	624.00
IUUC-Ptr-090694	Pan troglodytes	38.65	3.00e-179	620.00
IUUC-Pan-092420	Papio anubis	38.65	1.00e-180	625.00
IUUC-Psi-093683	Pelodiscus sinensis	37.73	2.00e-170	590.00
IUUC-Pma-094197	Petromyzon marinus	34.01	3.00e-29	119.00
IUUC-Pno-094783	Phaeosphaeria nodorum	59.11	0.00e+00	1125.00
IUUC-Ppa-095208	Physcomitrella patens	36.88	4.00e-155	540.00
IUUC-Pfo-096299	Poecilia formosa	38.11	0.00e+00	629.00
IUUC-Pab-098706	Pongo abelii	37.18	6.00e-169	586.00
IUUC-Pop-099275	Populus trichocarpa	36.59	5.00e-150	523.00
IUUC-Pca-100796	Procavia capensis	32.40	8.00e-113	399.00
IUUC-Ppe-101861	Prunus persica	37.10	2.00e-150	525.00
IUUC-Pva-103241	Pteropus vampyrus	36.60	1.00e-161	561.00
IUUC-Pgr-103432	Puccinia graminis	41.81	0.00e+00	696.00
IUUC-Ptt-103742	Puccinia triticina	38.32	9.00e-180	622.00
IUUC-Pte-104069	Pyrenophora teres	63.49	0.00e+00	1132.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	63.17	0.00e+00	1155.00
IUUC-Rno-105219	Rattus norvegicus	38.68	5.00e-177	613.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.25	0.00e+00	721.00
IUUC-Sha-107550	Sarcophilus harrisii	37.63	2.00e-175	607.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	42.83	0.00e+00	769.00
IUUC-Spo-108239	Schizosaccharomyces pombe	43.31	0.00e+00	777.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	67.69	0.00e+00	1311.00
IUUC-Smo-109477	Selaginella moellendorffii	36.88	1.00e-155	542.00
IUUC-Sit-110000	Setaria italica	37.80	2.00e-137	481.00
IUUC-Sly-111595	Solanum lycopersicum	37.76	4.00e-155	540.00
IUUC-Stu-112516	Solanum tuberosum	37.60	1.00e-152	532.00
IUUC-Sar-113195	Sorex araneus	43.92	3.00e-120	424.00
IUUC-Sbi-114465	Sorghum bicolor	37.58	2.00e-149	521.00
IUUC-Sre-115006	Sporisorium reilianum	41.69	0.00e+00	705.00
IUUC-Ssc-115929	Sus scrofa	39.06	2.00e-176	611.00
IUUC-Tgu-117282	Taeniopygia guttata	37.54	1.00e-170	592.00
IUUC-Tru-118406	Takifugu rubripes	38.19	3.00e-175	607.00
IUUC-Tsy-119170	Tarsius syrichta	37.54	8.00e-162	562.00
IUUC-Tni-119721	Tetraodon nigroviridis	37.99	5.00e-170	590.00
IUUC-Tca-121761	Theobroma cacao	37.66	1.00e-159	555.00
IUUC-Tre-121908	Trichoderma reesei	61.87	0.00e+00	1163.00
IUUC-Tvi-122547	Trichoderma virens	61.55	0.00e+00	1177.00
IUUC-Tae-123224	Triticum aestivum	37.86	3.00e-144	504.00
IUUC-Tur-126811	Triticum urartu	39.04	2.00e-145	508.00
IUUC-Tme-126987	Tuber melanosporum	59.23	0.00e+00	1137.00
IUUC-Tbe-127315	Tupaia belangeri	45.11	4.00e-113	400.00
IUUC-Ttr-129165	Tursiops truncatus	44.38	4.00e-70	258.00
IUUC-Uma-129651	Ustilago maydis	41.95	0.00e+00	709.00
IUUC-Vda-129973	Verticillium dahliae	62.87	0.00e+00	1169.00
IUUC-Vpa-130163	Vicugna pacos	32.06	4.00e-60	224.00
IUUC-Vvi-131402	Vitis vinifera	36.74	1.00e-156	545.00
IUUC-Xtr-132296	Xenopus tropicalis	38.08	3.00e-171	594.00
IUUC-Xma-133028	Xiphophorus maculatus	38.32	0.00e+00	641.00
IUUC-Yli-134484	Yarrowia lipolytica	44.89	0.00e+00	781.00
IUUC-Zma-135938	Zea mays	36.26	2.00e-144	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence