iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074227

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02000730

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000007572.3	ENSOCUT00000007580.3	ENSOCUP00000006553.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-44	146.7	673	703
UBD/Beta-Prp	4.60e-95	318.3	550	708

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 673  GHHQEIWCLAVsPNgDYVVSSSHDKSLRLWE 703
           78899*******777***************8 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v +sp+++lla++  d t+k++ v+t k++ sl+gh+ +v ++++s dg +++tgs Dr++k+w l+ g+c  +l +h+dsv+
   Q: 550  EDVLC-VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVM 637
           34555.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
            l+f p+++ + ++++dr i+ wd ++ + ++ tl+gh++ ++c++v+p+g+++vs+s D+ +rlW   ++ 
   Q: 638  YLQFVPKSHLFFTAGKDRKIKQWDADKFEHIQ-TLEGHHQEIWCLAVSPNGDYVVSSSHDKSLRLWERTREP 708
           ********************************.*********************************985554 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA APACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TSLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCCTTAC CTGTGGTATC GGACATCATA ACATGGGTCT CACCAAACAG TACCTGCGCT 60
ATGTTGCTAG TGCAGTCTTT GGCCTGATTG GCAGCCAAAA AGGTAACATT GTCTTTGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

ocu:100355708

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.60	1.00e-151	530.00
IUUC-Aml-001245	Ailuropoda melanoleuca	94.59	0.00e+00	1681.00
IUUC-Atr-002700	Amborella trichopoda	39.60	1.00e-177	616.00
IUUC-Apl-004164	Anas platyrhynchos	78.69	0.00e+00	1070.00
IUUC-Aca-004765	Anolis carolinensis	75.58	0.00e+00	1395.00
IUUC-Aly-006503	Arabidopsis lyrata	38.79	3.00e-177	615.00
IUUC-Ath-006848	Arabidopsis thaliana	39.15	3.00e-180	625.00
IUUC-Ago-007909	Ashbya gossypii	35.32	7.00e-146	511.00
IUUC-Acl-008238	Aspergillus clavatus	38.66	0.00e+00	629.00
IUUC-Afl-008544	Aspergillus flavus	38.53	2.00e-176	612.00
IUUC-Afu-008868	Aspergillus fumigatus	38.30	6.00e-178	617.00
IUUC-Ani-009367	Aspergillus nidulans	38.29	1.00e-174	606.00
IUUC-Ang-009732	Aspergillus niger	38.82	4.00e-179	622.00
IUUC-Aor-010140	Aspergillus oryzae	38.59	7.00e-177	614.00
IUUC-Ate-010572	Aspergillus terreus	38.44	1.00e-176	614.00
IUUC-Ame-010956	Astyanax mexicanus	64.18	0.00e+00	1130.00
IUUC-Bgr-012296	Blumeria graminis	37.04	2.00e-170	593.00
IUUC-Bta-012716	Bos taurus	95.12	0.00e+00	1733.00
IUUC-Bci-013699	Botrytis cinerea	37.34	3.00e-162	566.00
IUUC-Bdi-014525	Brachypodium distachyon	37.53	4.00e-162	565.00
IUUC-Bol-015117	Brassica oleracea	39.21	2.00e-174	606.00
IUUC-Bra-016869	Brassica rapa	39.20	1.00e-175	610.00
IUUC-Cel-018570	Caenorhabditis elegans	34.35	8.00e-133	468.00
IUUC-Cja-019425	Callithrix jacchus	94.07	0.00e+00	1687.00
IUUC-Cfa-020787	Canis familiaris	94.17	0.00e+00	1702.00
IUUC-Cpo-021729	Cavia porcellus	94.56	0.00e+00	1200.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.64	9.00e-108	384.00
IUUC-Csa-024098	Chlorocebus sabaeus	95.65	0.00e+00	1715.00
IUUC-Cho-024495	Choloepus hoffmanni	79.68	0.00e+00	958.00
IUUC-Cin-025245	Ciona intestinalis	48.97	7.00e-168	583.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.15	1.00e-166	580.00
IUUC-Cne-026835	Cryptococcus neoformans	45.89	4.00e-128	452.00
IUUC-Cme-027162	Cyanidioschyzon merolae	28.38	7.00e-38	152.00
IUUC-Dre-027874	Danio rerio	71.20	0.00e+00	1298.00
IUUC-Dno-028905	Dasypus novemcinctus	93.64	0.00e+00	1706.00
IUUC-Dor-030383	Dipodomys ordii	88.66	0.00e+00	832.00
IUUC-Dse-031297	Dothistroma septosporum	37.60	7.00e-165	574.00
IUUC-Dme-031956	Drosophila melanogaster	42.07	0.00e+00	681.00
IUUC-Ete-032608	Echinops telfairi	83.22	0.00e+00	943.00
IUUC-Eca-034181	Equus caballus	94.49	0.00e+00	1678.00
IUUC-Eeu-034495	Erinaceus europaeus	93.05	0.00e+00	1614.00
IUUC-Fca-035994	Felis catus	93.29	0.00e+00	1577.00
IUUC-Fal-036611	Ficedula albicollis	77.87	0.00e+00	1345.00
IUUC-Fox-037807	Fusarium oxysporum	37.66	4.00e-168	585.00
IUUC-Fso-038090	Fusarium solani	37.20	2.00e-165	576.00
IUUC-Gmo-039018	Gadus morhua	62.94	0.00e+00	697.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.27	6.00e-168	584.00
IUUC-Gga-040707	Gallus gallus	80.49	0.00e+00	1373.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.90	0.00e+00	690.00
IUUC-Gma-043860	Glycine max	38.39	1.00e-172	600.00
IUUC-Ggo-045334	Gorilla gorilla	95.13	0.00e+00	1660.00
IUUC-Hsa-046996	Homo sapiens	95.23	0.00e+00	1663.00
IUUC-Hvu-047381	Hordeum vulgare	34.83	3.00e-90	325.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	94.17	0.00e+00	1672.00
IUUC-Kpa-049185	Komagataella pastoris	34.39	9.00e-150	524.00
IUUC-Lch-050098	Latimeria chalumnae	67.49	0.00e+00	1154.00
IUUC-Lpe-050710	Leersia perrieri	36.34	4.00e-166	578.00
IUUC-Loc-052745	Lepisosteus oculatus	68.99	0.00e+00	1206.00
IUUC-Lma-053104	Leptosphaeria maculans	38.41	4.00e-176	612.00
IUUC-Laf-054395	Loxodonta africana	93.43	0.00e+00	1665.00
IUUC-Mcc-055077	Macaca mulatta	95.65	0.00e+00	1705.00
IUUC-Meu-056418	Macropus eugenii	83.58	0.00e+00	753.00
IUUC-Mor-057031	Magnaporthe oryzae	37.67	5.00e-155	541.00
IUUC-Mpo-057420	Magnaporthe poae	36.88	5.00e-166	578.00
IUUC-Mtr-057838	Medicago truncatula	38.32	0.00e+00	637.00
IUUC-Mla-058854	Melampsora laricipopulina	37.23	2.00e-159	556.00
IUUC-Mga-060120	Meleagris gallopavo	75.46	0.00e+00	1274.00
IUUC-Mvi-060407	Microbotryum violaceum	44.17	4.00e-136	479.00
IUUC-Mmr-060635	Microcebus murinus	93.75	0.00e+00	1655.00
IUUC-Mdo-063023	Monodelphis domestica	87.17	0.00e+00	1607.00
IUUC-Mmu-064103	Mus musculus	90.57	0.00e+00	1632.00
IUUC-Mac-065569	Musa acuminata	38.52	8.00e-173	600.00
IUUC-Mpu-066462	Mustela putorius furo	94.06	0.00e+00	1702.00
IUUC-Mlu-067894	Myotis lucifugus	94.38	0.00e+00	1713.00
IUUC-Nfi-068321	Neosartorya fischeri	38.19	3.00e-177	615.00
IUUC-Ncr-068661	Neurospora crassa	37.84	8.00e-167	580.00
IUUC-Nle-069409	Nomascus leucogenys	95.12	0.00e+00	1677.00
IUUC-Opr-070445	Ochotona princeps	84.44	0.00e+00	1542.00
IUUC-Ont-072339	Oreochromis niloticus	70.13	0.00e+00	1257.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.66	0.00e+00	1369.00
IUUC-Oba-075635	Oryza barthii	36.97	3.00e-158	552.00
IUUC-Obr-076897	Oryza brachyantha	38.21	1.00e-170	593.00
IUUC-Ogl-077555	Oryza glaberrima	36.87	6.00e-158	551.00
IUUC-Ogu-078724	Oryza glumaepatula	36.97	2.00e-159	556.00
IUUC-Oin-080030	Oryza indica	36.97	3.00e-158	552.00
IUUC-Olo-080687	Oryza longistaminata	35.12	7.00e-147	514.00
IUUC-Ome-081867	Oryza meridionalis	37.08	9.00e-159	554.00
IUUC-Oni-082559	Oryza nivara	36.97	3.00e-158	552.00
IUUC-Opu-083332	Oryza punctata	39.63	3.00e-149	522.00
IUUC-Oru-084455	Oryza rufipogon	36.97	3.00e-158	552.00
IUUC-Osa-085793	Oryza sativa	36.97	3.00e-158	552.00
IUUC-Ola-087395	Oryzias latipes	68.68	0.00e+00	1162.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.57	6.00e-159	554.00
IUUC-Oga-088574	Otolemur garnettii	94.70	0.00e+00	1716.00
IUUC-Oar-089453	Ovis aries	93.54	0.00e+00	1719.00
IUUC-Ptr-090694	Pan troglodytes	95.12	0.00e+00	1657.00
IUUC-Pan-092420	Papio anubis	95.34	0.00e+00	1699.00
IUUC-Psi-093683	Pelodiscus sinensis	82.91	0.00e+00	1503.00
IUUC-Pma-094197	Petromyzon marinus	55.70	7.00e-72	263.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.76	1.00e-173	603.00
IUUC-Ppa-095208	Physcomitrella patens	39.64	6.00e-176	611.00
IUUC-Pfo-096299	Poecilia formosa	69.21	0.00e+00	1266.00
IUUC-Pab-098706	Pongo abelii	95.33	0.00e+00	1671.00
IUUC-Pop-099275	Populus trichocarpa	38.30	2.00e-173	602.00
IUUC-Pca-100796	Procavia capensis	77.97	0.00e+00	1260.00
IUUC-Ppe-101861	Prunus persica	40.04	0.00e+00	629.00
IUUC-Pva-103241	Pteropus vampyrus	88.60	0.00e+00	1526.00
IUUC-Pgr-103432	Puccinia graminis	37.14	1.00e-156	547.00
IUUC-Ptt-103742	Puccinia triticina	40.70	1.00e-107	384.00
IUUC-Pte-104069	Pyrenophora teres	37.73	2.00e-164	573.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.67	6.00e-172	598.00
IUUC-Rno-105219	Rattus norvegicus	89.83	0.00e+00	1584.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.33	2.00e-120	427.00
IUUC-Sha-107550	Sarcophilus harrisii	87.13	0.00e+00	1601.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.91	2.00e-163	569.00
IUUC-Spo-108239	Schizosaccharomyces pombe	38.43	1.00e-171	597.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.00	3.00e-167	582.00
IUUC-Smo-108974	Selaginella moellendorffii	39.26	1.00e-170	593.00
IUUC-Sit-110000	Setaria italica	38.47	4.00e-161	562.00
IUUC-Sly-111595	Solanum lycopersicum	38.42	3.00e-179	622.00
IUUC-Stu-112516	Solanum tuberosum	38.29	4.00e-178	618.00
IUUC-Sar-113195	Sorex araneus	83.97	0.00e+00	1342.00
IUUC-Sbi-114465	Sorghum bicolor	37.03	5.00e-168	585.00
IUUC-Sre-115006	Sporisorium reilianum	34.78	5.00e-149	521.00
IUUC-Ssc-115929	Sus scrofa	94.17	0.00e+00	1660.00
IUUC-Tgu-117282	Taeniopygia guttata	77.98	0.00e+00	1345.00
IUUC-Tru-118406	Takifugu rubripes	68.83	0.00e+00	1209.00
IUUC-Tsy-119170	Tarsius syrichta	93.33	0.00e+00	1692.00
IUUC-Tni-119721	Tetraodon nigroviridis	67.06	0.00e+00	1176.00
IUUC-Tca-121761	Theobroma cacao	39.62	0.00e+00	635.00
IUUC-Tre-121908	Trichoderma reesei	36.52	6.00e-165	574.00
IUUC-Tvi-122547	Trichoderma virens	37.76	4.00e-169	588.00
IUUC-Tae-125496	Triticum aestivum	38.28	1.00e-164	573.00
IUUC-Tur-126811	Triticum urartu	39.65	1.00e-164	573.00
IUUC-Tme-126987	Tuber melanosporum	38.63	4.00e-178	618.00
IUUC-Tbe-127315	Tupaia belangeri	96.00	0.00e+00	892.00
IUUC-Ttr-129165	Tursiops truncatus	84.62	0.00e+00	1447.00
IUUC-Uma-129651	Ustilago maydis	35.28	1.00e-150	527.00
IUUC-Vda-129973	Verticillium dahliae	38.41	3.00e-160	559.00
IUUC-Vpa-130163	Vicugna pacos	83.81	0.00e+00	737.00
IUUC-Vvi-131402	Vitis vinifera	37.42	2.00e-179	623.00
IUUC-Xtr-132296	Xenopus tropicalis	73.71	0.00e+00	1317.00
IUUC-Xma-133028	Xiphophorus maculatus	69.39	0.00e+00	1271.00
IUUC-Yli-134484	Yarrowia lipolytica	38.22	1.00e-155	543.00
IUUC-Zma-135938	Zea mays	36.49	9.00e-167	580.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence