iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093781

Ensembl Protein ID

ENSPSIP00000009748.1

UniProt Accession

K7FNY8; K7FNY8_PELSI

Genbank Protein ID

ENSPSIP00000009748

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01011676

Gene Name

WDR60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000008862.1	ENSPSIT00000009796.1	ENSPSIP00000009748.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-09	36.7	649	681

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           ++vtc++f  s  tl+ +G+ Dg++ vWDlr++
   Q: 649  AEVTCCCFspSKaTLVFAGTMDGSLVVWDLRED 681
           57*******6559*****************976 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MVDYKGYVHK DQDKDRGEAK ERKGERERFK SSERDRDKLR ETERGKDHRE REREKFKEKI 60
QEKDAEKEKH ITRKDKEKGS EKEKDRKYRR DDQKQMLKQN NLRTHGEKDK EQHRRRESKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTCACAGT CAGATAGCCA ATCTGAAGAT AAGAAACAGA AGGAAAAGAA ACTGCAAAGA 60
GACAGAGAAA CTCAGGACAT GGTTGATTAC AAAGGATATG TACACAAGGA TCAAGACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097546--C:ciliary base
GO:0005868--C:cytoplasmic dynein complex
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0031021--C:interphase microtubule organizing center
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0060271--P:cilium assembly
GO:0048704--P:embryonic skeletal system morphogenesis

KEGG

pss:102461353

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001741	Ailuropoda melanoleuca	52.13	0.00e+00	813.00
IUUC-Apl-003689	Anas platyrhynchos	56.91	0.00e+00	1038.00
IUUC-Aca-004966	Anolis carolinensis	73.73	0.00e+00	951.00
IUUC-Ame-011562	Astyanax mexicanus	46.11	6.00e-91	328.00
IUUC-Bta-013100	Bos taurus	51.69	0.00e+00	808.00
IUUC-Cja-019521	Callithrix jacchus	61.20	0.00e+00	810.00
IUUC-Cfa-020943	Canis familiaris	60.57	0.00e+00	781.00
IUUC-Cho-024500	Choloepus hoffmanni	66.67	1.00e-144	506.00
IUUC-Dre-028530	Danio rerio	50.85	0.00e+00	679.00
IUUC-Dno-029442	Dasypus novemcinctus	57.04	0.00e+00	852.00
IUUC-Eca-033951	Equus caballus	61.33	0.00e+00	830.00
IUUC-Fca-036542	Felis catus	59.97	0.00e+00	750.00
IUUC-Fal-037079	Ficedula albicollis	73.92	0.00e+00	962.00
IUUC-Gac-041396	Gasterosteus aculeatus	49.75	1.00e-173	603.00
IUUC-Ggo-045638	Gorilla gorilla	60.06	0.00e+00	793.00
IUUC-Hsa-046371	Homo sapiens	54.21	0.00e+00	825.00
IUUC-Itr-049031	Ictidomys tridecemlineatus	58.40	0.00e+00	768.00
IUUC-Lch-049862	Latimeria chalumnae	60.12	0.00e+00	828.00
IUUC-Loc-052637	Lepisosteus oculatus	55.68	0.00e+00	664.00
IUUC-Laf-053470	Loxodonta africana	63.13	0.00e+00	836.00
IUUC-Mcc-055753	Macaca mulatta	54.80	0.00e+00	865.00
IUUC-Mga-059230	Meleagris gallopavo	59.22	0.00e+00	1004.00
IUUC-Mmr-061703	Microcebus murinus	52.25	0.00e+00	674.00
IUUC-Mmu-064346	Mus musculus	59.48	0.00e+00	803.00
IUUC-Mpu-066650	Mustela putorius furo	54.03	0.00e+00	761.00
IUUC-Nle-069413	Nomascus leucogenys	55.27	0.00e+00	802.00
IUUC-Opr-071033	Ochotona princeps	59.72	0.00e+00	773.00
IUUC-Ont-071388	Oreochromis niloticus	49.69	0.00e+00	646.00
IUUC-Oan-072714	Ornithorhynchus anatinus	54.57	0.00e+00	992.00
IUUC-Ocu-074557	Oryctolagus cuniculus	54.53	0.00e+00	804.00
IUUC-Oga-088938	Otolemur garnettii	52.83	0.00e+00	791.00
IUUC-Oar-090053	Ovis aries	53.31	2.00e-178	619.00
IUUC-Pan-091852	Papio anubis	55.68	0.00e+00	805.00
IUUC-Pfo-096078	Poecilia formosa	48.63	2.00e-162	566.00
IUUC-Pab-097947	Pongo abelii	54.34	0.00e+00	828.00
IUUC-Rno-105970	Rattus norvegicus	53.12	0.00e+00	790.00
IUUC-Tgu-117448	Taeniopygia guttata	73.85	0.00e+00	964.00
IUUC-Tni-120297	Tetraodon nigroviridis	48.60	2.00e-170	592.00
IUUC-Xtr-132946	Xenopus tropicalis	59.21	0.00e+00	771.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence