iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-021238

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03011491

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000008852.3	ENSCAFT00000014057.2	ENSCAFP00000013004.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-11	43.6	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d++l+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpcCDWFLATASVDQTVKIWDLRQ 274
           7888999999975559***************986 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAPRKRPETQ KTPEVAVRPK SKRSRSPREL EPEAKKLCVK GPGSSRRFDS GCLWAGLASL 60
QVPPSCSSIV RALHHHKLGK AAWPSLQQGL QQSFLHSLAS YRIFQKAAPF DRRATSLAWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCCA GGAAACGCCC AGAAACCCAG AAGACCCCCG AGGTGGCTGT GCGCCCCAAG 60
AGCAAGAGGA GCAGAAGCCC CCGGGAGCTG GAGCCCGAGG CCAAGAAGCT CTGTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.00	2.00e-30	127.00
IUUC-Aml-002203	Ailuropoda melanoleuca	96.48	0.00e+00	822.00
IUUC-Atr-002957	Amborella trichopoda	30.79	2.00e-36	147.00
IUUC-Apl-003832	Anas platyrhynchos	52.90	1.00e-125	443.00
IUUC-Aca-004358	Anolis carolinensis	53.71	9.00e-130	457.00
IUUC-Aly-006296	Arabidopsis lyrata	31.10	1.00e-34	141.00
IUUC-Ath-007115	Arabidopsis thaliana	31.10	4.00e-36	146.00
IUUC-Ame-010817	Astyanax mexicanus	54.02	4.00e-122	431.00
IUUC-Bta-012914	Bos taurus	92.43	0.00e+00	816.00
IUUC-Bdi-014261	Brachypodium distachyon	30.61	3.00e-31	129.00
IUUC-Bol-015317	Brassica oleracea	29.85	2.00e-34	140.00
IUUC-Bra-016848	Brassica rapa	31.08	1.00e-34	141.00
IUUC-Cja-018967	Callithrix jacchus	86.38	0.00e+00	743.00
IUUC-Cpo-022063	Cavia porcellus	80.14	0.00e+00	710.00
IUUC-Csa-023382	Chlorocebus sabaeus	86.38	0.00e+00	779.00
IUUC-Cho-024805	Choloepus hoffmanni	62.70	5.00e-98	350.00
IUUC-Dre-028732	Danio rerio	49.18	3.00e-110	392.00
IUUC-Dor-030461	Dipodomys ordii	77.95	1.00e-119	422.00
IUUC-Ete-033038	Echinops telfairi	75.18	0.00e+00	651.00
IUUC-Eca-033772	Equus caballus	92.25	0.00e+00	757.00
IUUC-Eeu-034662	Erinaceus europaeus	66.50	3.00e-71	261.00
IUUC-Fca-036095	Felis catus	95.77	0.00e+00	801.00
IUUC-Gmo-039683	Gadus morhua	50.42	7.00e-108	384.00
IUUC-Gga-040530	Gallus gallus	53.24	1.00e-126	446.00
IUUC-Gac-041517	Gasterosteus aculeatus	50.00	6.00e-99	354.00
IUUC-Gma-043378	Glycine max	31.33	5.00e-37	149.00
IUUC-Ggo-045364	Gorilla gorilla	87.09	0.00e+00	781.00
IUUC-Hsa-046354	Homo sapiens	86.85	0.00e+00	780.00
IUUC-Hvu-047151	Hordeum vulgare	31.18	2.00e-27	115.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	89.26	0.00e+00	779.00
IUUC-Lpe-051256	Leersia perrieri	30.30	3.00e-30	126.00
IUUC-Loc-052398	Lepisosteus oculatus	59.94	4.00e-127	448.00
IUUC-Laf-053562	Loxodonta africana	88.50	0.00e+00	748.00
IUUC-Mcc-055197	Macaca mulatta	66.51	8.00e-157	546.00
IUUC-Meu-056151	Macropus eugenii	76.28	4.00e-120	423.00
IUUC-Mtr-057940	Medicago truncatula	32.01	1.00e-35	144.00
IUUC-Mga-059923	Meleagris gallopavo	53.02	6.00e-133	467.00
IUUC-Mmr-061465	Microcebus murinus	91.21	3.00e-151	527.00
IUUC-Mdo-063063	Monodelphis domestica	68.11	3.00e-160	558.00
IUUC-Mmu-064294	Mus musculus	81.04	0.00e+00	692.00
IUUC-Mac-065598	Musa acuminata	30.27	3.00e-33	136.00
IUUC-Mpu-066831	Mustela putorius furo	95.77	0.00e+00	817.00
IUUC-Mlu-067222	Myotis lucifugus	88.65	0.00e+00	785.00
IUUC-Nle-069581	Nomascus leucogenys	87.32	0.00e+00	785.00
IUUC-Opr-070644	Ochotona princeps	83.37	0.00e+00	718.00
IUUC-Ont-072605	Oreochromis niloticus	50.60	3.00e-115	408.00
IUUC-Oan-072973	Ornithorhynchus anatinus	72.73	1.00e-150	525.00
IUUC-Ocu-074615	Oryctolagus cuniculus	84.74	0.00e+00	753.00
IUUC-Oba-075283	Oryza barthii	29.39	8.00e-30	125.00
IUUC-Obr-076605	Oryza brachyantha	31.21	6.00e-33	135.00
IUUC-Ogl-077512	Oryza glaberrima	29.39	8.00e-30	125.00
IUUC-Ogu-078329	Oryza glumaepatula	29.39	7.00e-30	125.00
IUUC-Oin-079980	Oryza indica	29.39	1.00e-29	124.00
IUUC-Olo-080516	Oryza longistaminata	29.70	4.00e-30	125.00
IUUC-Ome-081415	Oryza meridionalis	29.39	9.00e-30	125.00
IUUC-Oni-082985	Oryza nivara	29.39	1.00e-29	124.00
IUUC-Opu-084159	Oryza punctata	30.91	2.00e-31	130.00
IUUC-Oru-085137	Oryza rufipogon	29.39	5.00e-30	125.00
IUUC-Osa-085614	Oryza sativa	29.39	5.00e-30	125.00
IUUC-Ola-087044	Oryzias latipes	46.58	6.00e-105	374.00
IUUC-Oga-088274	Otolemur garnettii	86.76	0.00e+00	753.00
IUUC-Oar-089826	Ovis aries	92.67	0.00e+00	824.00
IUUC-Ptr-091631	Pan troglodytes	86.85	0.00e+00	780.00
IUUC-Pan-092535	Papio anubis	86.85	0.00e+00	783.00
IUUC-Psi-093815	Pelodiscus sinensis	56.35	9.00e-127	447.00
IUUC-Pma-094474	Petromyzon marinus	48.07	7.00e-96	343.00
IUUC-Ppa-095414	Physcomitrella patens	28.40	1.00e-28	121.00
IUUC-Pfo-096559	Poecilia formosa	45.52	4.00e-103	368.00
IUUC-Pab-098528	Pongo abelii	86.85	0.00e+00	781.00
IUUC-Pop-100064	Populus trichocarpa	28.66	6.00e-33	135.00
IUUC-Pca-100803	Procavia capensis	84.98	0.00e+00	736.00
IUUC-Ppe-101966	Prunus persica	30.79	4.00e-35	142.00
IUUC-Pva-103213	Pteropus vampyrus	90.14	0.00e+00	757.00
IUUC-Rno-105087	Rattus norvegicus	81.75	0.00e+00	710.00
IUUC-Sha-107466	Sarcophilus harrisii	70.59	1.00e-155	542.00
IUUC-Smo-108958	Selaginella moellendorffii	27.13	8.00e-26	111.00
IUUC-Sit-109968	Setaria italica	29.09	8.00e-29	122.00
IUUC-Sly-111495	Solanum lycopersicum	28.95	4.00e-32	132.00
IUUC-Stu-112182	Solanum tuberosum	24.71	4.00e-12	67.00
IUUC-Sar-113272	Sorex araneus	82.39	1.00e-169	588.00
IUUC-Sbi-114706	Sorghum bicolor	27.61	2.00e-25	110.00
IUUC-Ssc-115437	Sus scrofa	91.55	0.00e+00	807.00
IUUC-Tgu-116602	Taeniopygia guttata	54.16	6.00e-125	440.00
IUUC-Tru-118698	Takifugu rubripes	50.14	2.00e-100	359.00
IUUC-Tsy-119027	Tarsius syrichta	83.68	0.00e+00	685.00
IUUC-Tni-119787	Tetraodon nigroviridis	49.16	7.00e-103	367.00
IUUC-Tca-121447	Theobroma cacao	29.00	3.00e-33	136.00
IUUC-Tae-125839	Triticum aestivum	30.30	8.00e-31	128.00
IUUC-Tur-126724	Triticum urartu	30.30	9.00e-31	128.00
IUUC-Tbe-127680	Tupaia belangeri	82.66	4.00e-133	467.00
IUUC-Ttr-128201	Tursiops truncatus	82.63	0.00e+00	695.00
IUUC-Vpa-130451	Vicugna pacos	76.56	1.00e-119	423.00
IUUC-Vvi-131001	Vitis vinifera	29.85	2.00e-35	143.00
IUUC-Xtr-132266	Xenopus tropicalis	55.13	5.00e-130	457.00
IUUC-Xma-133034	Xiphophorus maculatus	49.64	2.00e-114	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence