iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131261

UUCD1 version

UUC-ViV-00723

Ensembl Protein ID

VIT_01s0150g00330.t01

UniProt Accession

F6HJ78; F6HJ78_VITVI

Genbank Protein ID

CCB52275.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595770

Gene Name

VIT_01s0150g00330

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0150g00330	VIT_01s0150g00330.t01	VIT_01s0150g00330.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.5	257	296
E3 activity/RING/U-box	3.50e-23	82.0	253	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e+++d p+   CgH f ++ + +++       ++e +CP+Cr
   Q: 257  CPLCKEMMSD-PVAIVCGHSFERKAIqEHF------WRGEKTCPICR 296
           **********.999************6444......8*********8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           e f+Cp+ +e+M+dPv + +G++++r++I++++ +g+ktcP++r++l++++l+Pnl+lr+ i++w ++
   Q: 253  ESFRCPLCKEMMSDPVAIVCGHSFERKAIQEHFWRGEKTCPICRERLRSTELTPNLSLRSSIEEWKQR 320
           78***************************************************************886 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEDVGTAVLQ ELWNRVTLQA MVFVGETSDM VFEKGFFQEF SKSISELRVL LQALNVEKVE 60
AAMSVRPTKT ALETLDSQLK RACKIIKDYK SRSSLSVLLQ SRSVLSQMKA LAEEIAKTIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGATG TTGGGACGGC AGTGCTGCAG GAACTGTGGA ATAGAGTGAC CCTTCAAGCT 60
ATGGTGTTTG TTGGTGAAAC AAGTGACATG GTGTTTGAAA AGGGGTTCTT CCAAGAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008942--ENTH_VHS
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX
PS50089--ZF_RING_2

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004412	Anolis carolinensis	35.82	7.00e-08	51.20
IUUC-Ame-011830	Astyanax mexicanus	34.88	9.00e-11	60.80
IUUC-Cpo-022090	Cavia porcellus	38.98	5.00e-07	48.10
IUUC-Cho-024849	Choloepus hoffmanni	38.36	2.00e-09	55.80
IUUC-Dre-028084	Danio rerio	42.86	9.00e-11	60.80
IUUC-Dno-029090	Dasypus novemcinctus	42.11	7.00e-09	54.30
IUUC-Fal-036867	Ficedula albicollis	31.40	2.00e-08	52.80
IUUC-Gmo-038629	Gadus morhua	40.79	2.00e-12	65.90
IUUC-Gga-040360	Gallus gallus	31.40	2.00e-08	52.80
IUUC-Gac-041913	Gasterosteus aculeatus	43.33	7.00e-10	57.80
IUUC-Itr-048465	Ictidomys tridecemlineatus	36.07	3.00e-08	52.40
IUUC-Lch-049437	Latimeria chalumnae	37.70	2.00e-10	59.70
IUUC-Meu-056027	Macropus eugenii	26.77	3.00e-08	52.00
IUUC-Mga-060146	Meleagris gallopavo	31.40	6.00e-09	52.80
IUUC-Mmr-061369	Microcebus murinus	35.63	1.00e-10	60.50
IUUC-Mdo-062117	Monodelphis domestica	34.15	6.00e-08	51.20
IUUC-Mmu-063495	Mus musculus	38.10	1.00e-09	57.00
IUUC-Mac-064728	Musa acuminata	42.95	0.00e+00	701.00
IUUC-Mlu-067864	Myotis lucifugus	40.54	1.00e-09	57.00
IUUC-Ont-072083	Oreochromis niloticus	40.00	3.00e-10	58.90
IUUC-Psi-093666	Pelodiscus sinensis	47.54	1.00e-11	62.00
IUUC-Pfo-096214	Poecilia formosa	40.30	1.00e-11	63.50
IUUC-Pop-099295	Populus trichocarpa	62.64	0.00e+00	1124.00
IUUC-Ppe-101916	Prunus persica	66.18	0.00e+00	1199.00
IUUC-Ssl-108490	Sclerotinia sclerotiorum	36.21	1.00e-06	46.60
IUUC-Sar-112919	Sorex araneus	37.66	1.00e-08	52.80
IUUC-Sre-115187	Sporisorium reilianum	44.19	5.00e-07	47.40
IUUC-Ssc-115780	Sus scrofa	43.75	3.00e-10	59.70
IUUC-Tgu-116998	Taeniopygia guttata	39.13	6.00e-09	54.70
IUUC-Tru-118470	Takifugu rubripes	33.85	3.00e-10	58.90
IUUC-Tsy-119220	Tarsius syrichta	40.58	1.00e-09	57.40
IUUC-Tni-120135	Tetraodon nigroviridis	37.50	1.00e-09	56.60
IUUC-Tca-121550	Theobroma cacao	66.37	0.00e+00	1174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence