iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121518

Ensembl Protein ID

EOX93306

UniProt Accession

A0A061DMJ9; A0A061DMJ9_THECC

Genbank Protein ID

EOX93305.1; EOX93306.1

Protein Name

PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isoform 1

Genbank Nucleotide ID

CM001879; CM001879

Gene Name

TCM_002152

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_002152	EOX93306	EOX93306
TCM_002152	EOX93307	EOX93307

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-09	37.7	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C+++++ee ++ ++ + C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDQ-FLCSDCSS 188
           78.7*****************************777777775.******87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAKTKPGKKD LDSYTIKGTN KVVRPGDCVL MRPSDSDKPP YVARVEKIEA DHRNNVKVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHYDV QSAHTIEGKC IVHTFKNYTK LENVGAEDYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTCTTCTC TTTCAACACT CCGTCCTCTC CCGGTACCTA GGGTTTCTTT GTCTGCCCAC 60
TCCCTAAATC CTTAAACCTT TACCTGTCTC TCCACAATTC TTCCTTTTCT CTGAACCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	44.00	2.00e-10	60.50
IUUC-Atr-002986	Amborella trichopoda	92.59	3.00e-120	422.00
IUUC-Aca-005043	Anolis carolinensis	37.66	4.00e-11	63.20
IUUC-Ago-007912	Ashbya gossypii	30.38	1.70e-02	33.50
IUUC-Ate-010345	Aspergillus terreus	42.11	1.00e-04	42.40
IUUC-Bdi-014153	Brachypodium distachyon	78.70	3.00e-101	359.00
IUUC-Cfa-021156	Canis familiaris	39.34	2.00e-10	60.80
IUUC-Cpo-022284	Cavia porcellus	44.00	1.00e-10	61.20
IUUC-Csa-023515	Chlorocebus sabaeus	44.00	2.00e-10	60.80
IUUC-Cne-026894	Cryptococcus neoformans	45.76	2.00e-09	57.00
IUUC-Ete-032380	Echinops telfairi	44.00	2.00e-10	60.50
IUUC-Eca-034302	Equus caballus	44.00	2.00e-10	60.80
IUUC-Fca-035578	Felis catus	44.00	2.00e-10	60.80
IUUC-Fal-037017	Ficedula albicollis	48.00	2.00e-11	64.30
IUUC-Fso-038446	Fusarium solani	38.89	3.00e-06	45.40
IUUC-Gga-040290	Gallus gallus	48.00	2.00e-11	64.30
IUUC-Gma-043039	Glycine max	85.19	2.00e-113	400.00
IUUC-Ggo-044712	Gorilla gorilla	44.00	2.00e-10	60.80
IUUC-Hsa-046760	Homo sapiens	48.00	2.00e-11	64.30
IUUC-Lch-049793	Latimeria chalumnae	44.00	2.00e-10	61.20
IUUC-Lpe-051400	Leersia perrieri	81.02	2.00e-102	363.00
IUUC-Laf-053656	Loxodonta africana	44.00	2.00e-10	60.50
IUUC-Mcc-055658	Macaca mulatta	44.00	2.00e-10	60.80
IUUC-Mpo-057588	Magnaporthe poae	32.50	3.00e-06	45.80
IUUC-Mtr-057710	Medicago truncatula	85.19	4.00e-107	379.00
IUUC-Mmr-061132	Microcebus murinus	48.00	2.00e-11	64.30
IUUC-Mmu-063458	Mus musculus	48.00	2.00e-11	64.30
IUUC-Mac-064749	Musa acuminata	89.35	1.00e-111	394.00
IUUC-Mpu-066429	Mustela putorius furo	44.00	2.00e-10	60.80
IUUC-Mlu-067746	Myotis lucifugus	44.00	3.00e-10	60.50
IUUC-Nle-070143	Nomascus leucogenys	44.00	2.00e-10	60.80
IUUC-Ont-072257	Oreochromis niloticus	42.00	4.00e-10	59.70
IUUC-Oan-073654	Ornithorhynchus anatinus	44.00	3.00e-10	60.10
IUUC-Ocu-074417	Oryctolagus cuniculus	44.00	2.00e-10	60.80
IUUC-Oba-075188	Oryza barthii	78.85	1.00e-98	351.00
IUUC-Obr-076844	Oryza brachyantha	77.78	2.00e-101	360.00
IUUC-Ogl-077260	Oryza glaberrima	77.78	3.00e-101	360.00
IUUC-Ogu-078663	Oryza glumaepatula	78.70	4.00e-102	362.00
IUUC-Oin-079894	Oryza indica	78.24	7.00e-102	362.00
IUUC-Olo-080411	Oryza longistaminata	81.96	2.00e-98	350.00
IUUC-Ome-081623	Oryza meridionalis	78.24	4.00e-101	359.00
IUUC-Oni-082587	Oryza nivara	78.24	7.00e-102	362.00
IUUC-Opu-083591	Oryza punctata	80.09	3.00e-106	376.00
IUUC-Oru-084597	Oryza rufipogon	77.78	3.00e-101	359.00
IUUC-Osa-086057	Oryza sativa	78.24	7.00e-102	362.00
IUUC-Ola-087236	Oryzias latipes	44.00	1.00e-10	61.60
IUUC-Oga-088662	Otolemur garnettii	42.11	8.00e-11	62.00
IUUC-Oar-090332	Ovis aries	44.00	2.00e-10	60.80
IUUC-Ptr-091328	Pan troglodytes	48.00	2.00e-11	63.90
IUUC-Ppa-095645	Physcomitrella patens	74.89	2.00e-89	320.00
IUUC-Pfo-096107	Poecilia formosa	44.00	6.00e-11	62.80
IUUC-Pab-097635	Pongo abelii	44.00	2.00e-10	60.80
IUUC-Pca-100779	Procavia capensis	44.00	3.00e-10	60.50
IUUC-Ppe-101758	Prunus persica	94.44	4.00e-123	432.00
IUUC-Pva-102839	Pteropus vampyrus	44.00	2.00e-10	60.80
IUUC-Rno-105402	Rattus norvegicus	48.00	4.00e-11	62.80
IUUC-Smo-109649	Selaginella moellendorffii	72.27	1.00e-93	334.00
IUUC-Sit-110411	Setaria italica	81.02	6.00e-107	379.00
IUUC-Sly-111450	Solanum lycopersicum	90.28	8.00e-118	414.00
IUUC-Stu-112123	Solanum tuberosum	91.43	6.00e-117	412.00
IUUC-Sbi-114186	Sorghum bicolor	79.17	1.00e-104	370.00
IUUC-Ssc-115645	Sus scrofa	44.00	2.00e-10	60.50
IUUC-Tgu-117091	Taeniopygia guttata	48.00	2.00e-11	64.30
IUUC-Tru-118118	Takifugu rubripes	44.00	1.00e-10	61.60
IUUC-Tsy-119214	Tarsius syrichta	44.00	2.00e-10	60.80
IUUC-Tni-120632	Tetraodon nigroviridis	44.00	1.00e-10	61.60
IUUC-Tae-122704	Triticum aestivum	80.56	4.00e-100	355.00
IUUC-Tur-126461	Triticum urartu	67.59	5.00e-80	288.00
IUUC-Ttr-128194	Tursiops truncatus	48.00	2.00e-11	64.30
IUUC-Vpa-130595	Vicugna pacos	44.00	2.00e-10	60.80
IUUC-Vvi-131614	Vitis vinifera	97.22	2.00e-124	436.00
IUUC-Xtr-132307	Xenopus tropicalis	44.00	2.00e-10	61.20
IUUC-Xma-134323	Xiphophorus maculatus	44.00	6.00e-11	62.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence