iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-051963

Ensembl Protein ID

ENSLOCP00000021020.1

UniProt Accession

W5NK61; W5NK61_LEPOC

Genbank Protein ID

ENSLOCP00000021020

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01034337

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000017001.1	ENSLOCT00000021056.1	ENSLOCP00000021020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-19	70.6	296	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vClvCg+g+e++  l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 296  VCLVCGRGDEED-RLLLCDGCDDSYHTFCLIPP-LQDVPKGD-WRCPKCVA 343
           8*********88.5*******************.*******7.******75 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MSVYSEFVPP PECPVFEPSW EDFSDPLGFI NKIRPIAEHT VVCRFVILAE YKPHLKLGFR 60
RTTPGIFVSF ISYAKALTRV KLNFLDQIAK FWELQGSMLR IPHVERKILD LYMLSKIVSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTGT ACTCTGAATT CGTCCCTCCT CCGGAGTGTC CTGTCTTTGA GCCCAGTTGG 60
GAAGATTTTT CGGACCCTTT AGGTTTTATT AACAAGATAC GACCCATTGC CGAGAANNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	76.38	0.00e+00	2145.00
IUUC-Apl-004141	Anas platyrhynchos	77.28	0.00e+00	2188.00
IUUC-Aca-004952	Anolis carolinensis	75.08	0.00e+00	2184.00
IUUC-Acl-008162	Aspergillus clavatus	30.82	3.00e-119	423.00
IUUC-Afl-008625	Aspergillus flavus	30.72	7.00e-114	405.00
IUUC-Ani-009139	Aspergillus nidulans	29.89	1.00e-113	405.00
IUUC-Aor-010155	Aspergillus oryzae	30.72	8.00e-114	405.00
IUUC-Ate-010453	Aspergillus terreus	30.48	2.00e-111	398.00
IUUC-Ame-011323	Astyanax mexicanus	81.98	0.00e+00	2531.00
IUUC-Bgr-012241	Blumeria graminis	31.60	2.00e-117	417.00
IUUC-Bta-012902	Bos taurus	75.62	0.00e+00	2168.00
IUUC-Bci-013992	Botrytis cinerea	29.31	8.00e-114	405.00
IUUC-Cja-018988	Callithrix jacchus	77.36	0.00e+00	2070.00
IUUC-Cfa-020212	Canis familiaris	75.57	0.00e+00	2112.00
IUUC-Cpo-022221	Cavia porcellus	80.59	0.00e+00	1576.00
IUUC-Csa-023575	Chlorocebus sabaeus	76.44	0.00e+00	2179.00
IUUC-Cho-024280	Choloepus hoffmanni	72.15	0.00e+00	1948.00
IUUC-Cin-025321	Ciona intestinalis	47.49	0.00e+00	1056.00
IUUC-Csv-026185	Ciona savignyi	46.05	0.00e+00	1113.00
IUUC-Dre-027909	Danio rerio	83.20	0.00e+00	1781.00
IUUC-Dno-029473	Dasypus novemcinctus	77.62	0.00e+00	2113.00
IUUC-Dor-030226	Dipodomys ordii	53.08	0.00e+00	1018.00
IUUC-Dse-031479	Dothistroma septosporum	29.27	2.00e-116	414.00
IUUC-Dme-032021	Drosophila melanogaster	45.79	0.00e+00	1062.00
IUUC-Eca-034265	Equus caballus	75.62	0.00e+00	2155.00
IUUC-Eeu-034692	Erinaceus europaeus	57.81	0.00e+00	1119.00
IUUC-Fca-035476	Felis catus	76.49	0.00e+00	2146.00
IUUC-Fal-037078	Ficedula albicollis	76.04	0.00e+00	2061.00
IUUC-Fso-038127	Fusarium solani	28.63	3.00e-111	397.00
IUUC-Gmo-039140	Gadus morhua	51.36	0.00e+00	1293.00
IUUC-Gga-040466	Gallus gallus	76.17	0.00e+00	2244.00
IUUC-Gac-042566	Gasterosteus aculeatus	82.92	0.00e+00	2388.00
IUUC-Ggo-044524	Gorilla gorilla	77.45	0.00e+00	1851.00
IUUC-Hsa-045821	Homo sapiens	74.88	0.00e+00	2301.00
IUUC-Kpa-049245	Komagataella pastoris	21.67	1.00e-28	122.00
IUUC-Lch-050630	Latimeria chalumnae	72.22	0.00e+00	2076.00
IUUC-Laf-053918	Loxodonta africana	70.37	0.00e+00	1899.00
IUUC-Mcc-055672	Macaca mulatta	76.51	0.00e+00	2179.00
IUUC-Meu-056643	Macropus eugenii	54.18	0.00e+00	1286.00
IUUC-Mor-057198	Magnaporthe oryzae	30.72	9.00e-121	429.00
IUUC-Mga-059192	Meleagris gallopavo	69.15	0.00e+00	1864.00
IUUC-Mmr-060968	Microcebus murinus	76.38	0.00e+00	2169.00
IUUC-Mdo-062945	Monodelphis domestica	74.86	0.00e+00	2226.00
IUUC-Mmu-063614	Mus musculus	75.32	0.00e+00	2155.00
IUUC-Mpu-066349	Mustela putorius furo	76.44	0.00e+00	2145.00
IUUC-Mlu-067363	Myotis lucifugus	76.17	0.00e+00	2194.00
IUUC-Nle-070142	Nomascus leucogenys	76.44	0.00e+00	2172.00
IUUC-Opr-071002	Ochotona princeps	67.49	0.00e+00	1898.00
IUUC-Ont-072471	Oreochromis niloticus	89.20	0.00e+00	2152.00
IUUC-Oan-072797	Ornithorhynchus anatinus	67.20	0.00e+00	1698.00
IUUC-Ocu-074164	Oryctolagus cuniculus	74.74	0.00e+00	2306.00
IUUC-Ola-087076	Oryzias latipes	81.38	0.00e+00	2291.00
IUUC-Oga-088350	Otolemur garnettii	74.40	0.00e+00	2081.00
IUUC-Oar-090045	Ovis aries	75.69	0.00e+00	2173.00
IUUC-Ptr-091199	Pan troglodytes	76.88	0.00e+00	2166.00
IUUC-Pan-092094	Papio anubis	74.55	0.00e+00	2143.00
IUUC-Psi-093550	Pelodiscus sinensis	76.58	0.00e+00	2164.00
IUUC-Pma-094137	Petromyzon marinus	52.10	0.00e+00	1231.00
IUUC-Pno-094879	Phaeosphaeria nodorum	30.05	2.00e-113	404.00
IUUC-Ppa-095839	Physcomitrella patens	50.72	3.00e-16	82.00
IUUC-Pfo-097266	Poecilia formosa	83.62	0.00e+00	2327.00
IUUC-Pab-098576	Pongo abelii	76.51	0.00e+00	2160.00
IUUC-Pca-100123	Procavia capensis	79.09	0.00e+00	1410.00
IUUC-Pva-103109	Pteropus vampyrus	77.59	0.00e+00	1840.00
IUUC-Pte-104195	Pyrenophora teres	30.28	1.00e-121	431.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.76	8.00e-122	432.00
IUUC-Rno-105664	Rattus norvegicus	75.18	0.00e+00	2149.00
IUUC-Sce-106207	Saccharomyces cerevisiae	34.56	8.00e-75	275.00
IUUC-Sha-107506	Sarcophilus harrisii	80.30	0.00e+00	1995.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	21.12	8.00e-41	162.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.54	3.00e-55	211.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.35	1.00e-117	419.00
IUUC-Smo-108843	Selaginella moellendorffii	56.25	2.00e-11	65.10
IUUC-Sar-113052	Sorex araneus	75.37	0.00e+00	2138.00
IUUC-Sre-115161	Sporisorium reilianum	38.98	1.00e-97	352.00
IUUC-Ssc-116354	Sus scrofa	55.11	0.00e+00	1337.00
IUUC-Tgu-116613	Taeniopygia guttata	76.55	0.00e+00	2189.00
IUUC-Tru-118604	Takifugu rubripes	88.03	0.00e+00	2144.00
IUUC-Tsy-119237	Tarsius syrichta	72.69	0.00e+00	1856.00
IUUC-Tni-120779	Tetraodon nigroviridis	83.20	0.00e+00	2331.00
IUUC-Tbe-128040	Tupaia belangeri	68.95	0.00e+00	765.00
IUUC-Ttr-129242	Tursiops truncatus	75.17	0.00e+00	2110.00
IUUC-Vda-129733	Verticillium dahliae	30.69	1.00e-105	379.00
IUUC-Vpa-130429	Vicugna pacos	68.93	0.00e+00	1085.00
IUUC-Xtr-131762	Xenopus tropicalis	76.17	0.00e+00	2018.00
IUUC-Xma-133693	Xiphophorus maculatus	83.73	0.00e+00	2353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence