iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022880

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496111

Gene Name

CHLREDRAFT_48734

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_48734	EDP07967	EDP07967

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-44	145.1	30	66
UBD/Beta-Prp	1.20e-69	234.3	118	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v+c+a   s+  +++Gs D tik+WDl +g l
   Q: 30   GHLGWVRCVAVdpSNEWFATGSADRTIKIWDLASGQL 66
           8***********54499***************99875 PP

UBD/Beta-Prp

   S: 54   evtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvs 154
           +v+++ ++p+ ++l+tg++D +++vwd++t  + ++l+gh+++v+sl  ++ +  ++sGshd+tir+wdl++g+ +  +l+ h+++++ +++hp ++ ++s
   Q: 118  GVYSIALHPNLDVLMTGGRDSVVRVWDMRTKVQAMVLSGHDQTVCSLLAQAPDPQVISGSHDSTIRLWDLRKGKASA-VLTHHKKSIRALAMHPHEFAFAS 217
           7999**********************************************99************************9.*********************** PP
   S: 155  GslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec.....vrtlnght........dnvksvrfspnderlvsgss 242
           +s+ + ++ W l+ g+ l+ + +++   ++s++++++g  +++g+++g++ lwd ++g+c                        +++ f+  + rl+++  
   Q: 218  ASAEN-IKKWALPDGDFLHNMLSQQRAIINSMAINQDG-VVATGGDNGSLWLWDWRSGHCfqqdeT-----VVqpgsleseGALYDMTFDMTGSRLITAEG 311
           **987.666************999************98.9********************666552.....2233344555999***************** PP
   S: 243  DgsiriW.d 250
           D+++++W  
   Q: 312  DKTVKMWkE 320
           *******42 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

SSAAVSRRIA SKWPRPVWHA PWKMYRVISG HLGWVRCVAV DPSNEWFATG SADRTIKIWD 60
LASGQLKLTL TGHIEQVTGL AVSSRHPYMF SCGLDKMVKC WDLEQNKVIR SYHGHLSGVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAGCGCGG CGGTTTCCCG GCGCATCGCC AGCAAGTGGC CTCGGCCGGT GTGGCACGCG 60
CCCTGGAAGA TGTACCGTGT CATCTCCGGC CACCTGGGGT GAGGCGGGGC TGCTGCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

cre:CHLREDRAFT_48734

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	64.80	2.00e-150	524.00
IUUC-Aml-001605	Ailuropoda melanoleuca	59.88	3.00e-124	437.00
IUUC-Atr-002757	Amborella trichopoda	72.30	5.00e-149	519.00
IUUC-Apl-003198	Anas platyrhynchos	60.61	1.00e-124	438.00
IUUC-Aca-004683	Anolis carolinensis	59.88	1.00e-124	438.00
IUUC-Aly-005775	Arabidopsis lyrata	73.18	2.00e-158	550.00
IUUC-Ath-007460	Arabidopsis thaliana	72.59	2.00e-157	546.00
IUUC-Ago-007884	Ashbya gossypii	52.19	7.00e-110	389.00
IUUC-Acl-008153	Aspergillus clavatus	63.50	2.00e-121	427.00
IUUC-Afl-008384	Aspergillus flavus	62.88	4.00e-121	426.00
IUUC-Afu-009045	Aspergillus fumigatus	62.88	1.00e-120	424.00
IUUC-Ani-009229	Aspergillus nidulans	62.31	8.00e-120	421.00
IUUC-Ang-009812	Aspergillus niger	63.93	7.00e-113	398.00
IUUC-Aor-010059	Aspergillus oryzae	62.88	4.00e-121	426.00
IUUC-Ate-010351	Aspergillus terreus	62.58	2.00e-127	446.00
IUUC-Ame-011613	Astyanax mexicanus	39.29	2.00e-64	237.00
IUUC-Bgr-012042	Blumeria graminis	63.66	2.00e-126	443.00
IUUC-Bta-012406	Bos taurus	59.88	3.00e-124	436.00
IUUC-Bci-013760	Botrytis cinerea	61.11	1.00e-121	427.00
IUUC-Bdi-014776	Brachypodium distachyon	69.68	2.00e-153	533.00
IUUC-Bol-016189	Brassica oleracea	72.01	6.00e-157	545.00
IUUC-Bra-018044	Brassica rapa	72.01	7.00e-157	545.00
IUUC-Cel-018651	Caenorhabditis elegans	61.85	1.00e-121	428.00
IUUC-Cja-019974	Callithrix jacchus	59.70	5.00e-124	436.00
IUUC-Cfa-021085	Canis familiaris	59.88	3.00e-124	436.00
IUUC-Cpo-021458	Cavia porcellus	59.57	3.00e-124	436.00
IUUC-Csa-023883	Chlorocebus sabaeus	59.57	4.00e-124	436.00
IUUC-Cho-024623	Choloepus hoffmanni	60.57	2.00e-120	424.00
IUUC-Cin-025190	Ciona intestinalis	61.52	8.00e-127	445.00
IUUC-Csv-026367	Ciona savignyi	61.52	9.00e-128	448.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	62.54	4.00e-125	439.00
IUUC-Cne-027069	Cryptococcus neoformans	59.19	6.00e-117	412.00
IUUC-Cme-027233	Cyanidioschyzon merolae	31.40	3.00e-34	137.00
IUUC-Dre-028260	Danio rerio	61.61	2.00e-125	440.00
IUUC-Dno-029112	Dasypus novemcinctus	59.57	6.00e-124	436.00
IUUC-Dor-031118	Dipodomys ordii	59.88	3.00e-124	436.00
IUUC-Dse-031493	Dothistroma septosporum	60.23	4.00e-120	423.00
IUUC-Dme-032138	Drosophila melanogaster	61.44	6.00e-126	442.00
IUUC-Ete-032411	Echinops telfairi	52.73	6.00e-101	359.00
IUUC-Eca-033521	Equus caballus	59.27	1.00e-123	434.00
IUUC-Eeu-035249	Erinaceus europaeus	50.46	4.00e-97	346.00
IUUC-Fca-036358	Felis catus	59.57	2.00e-123	434.00
IUUC-Fal-036933	Ficedula albicollis	60.18	1.00e-124	438.00
IUUC-Fox-037713	Fusarium oxysporum	62.92	1.00e-126	444.00
IUUC-Fso-038380	Fusarium solani	64.49	3.00e-127	446.00
IUUC-Gmo-039133	Gadus morhua	61.61	5.00e-125	439.00
IUUC-Ggr-039915	Gaeumannomyces graminis	63.03	3.00e-122	429.00
IUUC-Gga-041176	Gallus gallus	59.88	6.00e-124	436.00
IUUC-Gac-042344	Gasterosteus aculeatus	62.54	1.00e-125	441.00
IUUC-Gma-043328	Glycine max	74.05	1.00e-158	551.00
IUUC-Ggo-044478	Gorilla gorilla	59.57	5.00e-124	436.00
IUUC-Hsa-046037	Homo sapiens	59.57	5.00e-124	436.00
IUUC-Hvu-047349	Hordeum vulgare	70.85	1.00e-155	540.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	59.57	5.00e-124	436.00
IUUC-Kpa-049343	Komagataella pastoris	55.26	3.00e-114	403.00
IUUC-Lch-049830	Latimeria chalumnae	61.68	3.00e-125	439.00
IUUC-Lpe-051442	Leersia perrieri	72.30	1.00e-157	547.00
IUUC-Loc-051794	Lepisosteus oculatus	60.68	8.00e-123	432.00
IUUC-Lma-053137	Leptosphaeria maculans	60.06	5.00e-123	432.00
IUUC-Laf-053471	Loxodonta africana	59.57	3.00e-124	436.00
IUUC-Mcc-055627	Macaca mulatta	59.57	5.00e-124	436.00
IUUC-Meu-056148	Macropus eugenii	59.57	8.00e-122	428.00
IUUC-Mor-056960	Magnaporthe oryzae	62.31	2.00e-125	441.00
IUUC-Mtr-057816	Medicago truncatula	72.01	5.00e-157	545.00
IUUC-Mla-059031	Melampsora laricipopulina	61.08	4.00e-116	409.00
IUUC-Mga-059337	Meleagris gallopavo	59.88	4.00e-124	436.00
IUUC-Mvi-060217	Microbotryum violaceum	60.87	1.00e-119	421.00
IUUC-Mmr-061018	Microcebus murinus	59.57	6.00e-124	435.00
IUUC-Mdo-062863	Monodelphis domestica	61.34	5.00e-122	429.00
IUUC-Mmu-063988	Mus musculus	60.49	2.00e-124	437.00
IUUC-Mac-064459	Musa acuminata	71.47	3.00e-144	503.00
IUUC-Mpu-066559	Mustela putorius furo	59.88	3.00e-124	436.00
IUUC-Mlu-067361	Myotis lucifugus	59.57	9.00e-124	435.00
IUUC-Nfi-068492	Neosartorya fischeri	62.88	9.00e-121	425.00
IUUC-Ncr-068808	Neurospora crassa	61.52	2.00e-124	437.00
IUUC-Nle-069875	Nomascus leucogenys	59.57	4.00e-124	436.00
IUUC-Opr-070462	Ochotona princeps	56.93	4.00e-94	336.00
IUUC-Ont-071365	Oreochromis niloticus	61.09	8.00e-125	438.00
IUUC-Oan-072708	Ornithorhynchus anatinus	59.57	4.00e-124	436.00
IUUC-Ocu-074594	Oryctolagus cuniculus	59.57	5.00e-124	436.00
IUUC-Oba-075570	Oryza barthii	72.30	1.00e-157	547.00
IUUC-Obr-076366	Oryza brachyantha	73.53	7.00e-108	381.00
IUUC-Ogl-077153	Oryza glaberrima	72.01	4.00e-156	542.00
IUUC-Ogu-078540	Oryza glumaepatula	72.30	1.00e-157	547.00
IUUC-Oin-079612	Oryza indica	71.26	1.00e-155	541.00
IUUC-Olo-081077	Oryza longistaminata	71.26	1.00e-155	541.00
IUUC-Ome-081236	Oryza meridionalis	70.98	2.00e-155	540.00
IUUC-Oni-082499	Oryza nivara	72.30	1.00e-157	547.00
IUUC-Opu-083499	Oryza punctata	71.26	1.00e-155	540.00
IUUC-Oru-084276	Oryza rufipogon	72.30	1.00e-157	547.00
IUUC-Osa-085849	Oryza sativa	72.30	1.00e-157	547.00
IUUC-Ola-086655	Oryzias latipes	63.72	2.00e-126	444.00
IUUC-Olu-087637	Ostreococcus lucimarinus	69.30	3.00e-149	519.00
IUUC-Oga-087934	Otolemur garnettii	59.57	4.00e-124	436.00
IUUC-Oar-090185	Ovis aries	59.88	3.00e-124	436.00
IUUC-Ptr-091198	Pan troglodytes	59.57	4.00e-124	436.00
IUUC-Pan-092622	Papio anubis	59.57	4.00e-124	436.00
IUUC-Psi-093320	Pelodiscus sinensis	59.70	8.00e-124	435.00
IUUC-Pma-094638	Petromyzon marinus	59.76	2.00e-123	433.00
IUUC-Pno-094826	Phaeosphaeria nodorum	50.88	9.00e-100	355.00
IUUC-Ppa-095576	Physcomitrella patens	71.93	7.00e-146	508.00
IUUC-Pfo-096894	Poecilia formosa	61.70	7.00e-125	438.00
IUUC-Pab-098020	Pongo abelii	59.57	4.00e-124	436.00
IUUC-Pop-099180	Populus trichocarpa	72.89	2.00e-148	516.00
IUUC-Pca-100909	Procavia capensis	60.59	9.00e-101	358.00
IUUC-Ppe-101346	Prunus persica	72.30	3.00e-158	549.00
IUUC-Pva-102167	Pteropus vampyrus	52.58	1.00e-101	362.00
IUUC-Pgr-103516	Puccinia graminis	59.63	3.00e-115	406.00
IUUC-Ptt-103738	Puccinia triticina	59.88	2.00e-115	407.00
IUUC-Pte-104352	Pyrenophora teres	61.52	5.00e-126	442.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	60.91	6.00e-125	439.00
IUUC-Rno-105291	Rattus norvegicus	60.18	2.00e-124	437.00
IUUC-Sce-106204	Saccharomyces cerevisiae	54.55	9.00e-111	391.00
IUUC-Sha-106943	Sarcophilus harrisii	59.87	1.00e-118	418.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	61.40	3.00e-122	430.00
IUUC-Spo-108049	Schizosaccharomyces pombe	62.39	1.00e-127	447.00
IUUC-Smo-109043	Selaginella moellendorffii	69.88	7.00e-152	528.00
IUUC-Sit-110431	Setaria italica	71.14	6.00e-156	541.00
IUUC-Sly-111391	Solanum lycopersicum	74.14	4.00e-148	516.00
IUUC-Stu-112364	Solanum tuberosum	64.47	2.00e-113	399.00
IUUC-Sar-113450	Sorex araneus	60.00	9.00e-124	435.00
IUUC-Sbi-113829	Sorghum bicolor	71.72	4.00e-156	542.00
IUUC-Sre-115153	Sporisorium reilianum	58.68	8.00e-114	402.00
IUUC-Ssc-116274	Sus scrofa	59.57	6.00e-124	436.00
IUUC-Tgu-117417	Taeniopygia guttata	60.18	9.00e-125	438.00
IUUC-Tru-117615	Takifugu rubripes	61.51	5.00e-118	416.00
IUUC-Tsy-119480	Tarsius syrichta	59.57	6.00e-124	436.00
IUUC-Tni-119847	Tetraodon nigroviridis	62.46	9.00e-125	438.00
IUUC-Tca-121287	Theobroma cacao	72.01	3.00e-157	546.00
IUUC-Tre-122010	Trichoderma reesei	63.29	2.00e-123	434.00
IUUC-Tvi-122475	Trichoderma virens	63.92	1.00e-124	437.00
IUUC-Tae-124921	Triticum aestivum	70.85	4.00e-155	539.00
IUUC-Tur-126116	Triticum urartu	60.06	5.00e-121	426.00
IUUC-Tme-126992	Tuber melanosporum	61.81	8.00e-128	448.00
IUUC-Tbe-127803	Tupaia belangeri	61.24	2.00e-98	350.00
IUUC-Ttr-128933	Tursiops truncatus	59.57	7.00e-124	435.00
IUUC-Uma-129447	Ustilago maydis	56.47	3.00e-112	397.00
IUUC-Vda-129780	Verticillium dahliae	62.02	5.00e-126	442.00
IUUC-Vpa-130557	Vicugna pacos	40.21	4.00e-38	150.00
IUUC-Vvi-130918	Vitis vinifera	70.85	5.00e-148	515.00
IUUC-Xtr-132409	Xenopus tropicalis	60.61	2.00e-124	437.00
IUUC-Xma-133420	Xiphophorus maculatus	61.40	7.00e-125	438.00
IUUC-Yli-134362	Yarrowia lipolytica	59.01	5.00e-121	426.00
IUUC-Zma-135804	Zea mays	69.83	2.00e-153	533.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence