iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000007845.1	ENSONIT00000009894.1	ENSONIP00000009888.1
ENSONIG00000007845.1	ENSONIT00000009895.1	ENSONIP00000009889.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-07	30.7	9	57
E3 activity/RING/RING	4.40e-09	37.2	13	53

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplt 51
           e+f C+I le++ +Pv +p+G+++ +++++ + ++++k  cP+++++ +
   Q: 9    EQFSCSICLEIFVEPVSTPCGHSFCKACLQGYWNHSKKfLCPMCKKSYS 57
           78********************************999999****99874 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle f + p+++pCgH f++ Clq +     + sk+f+CP C+
   Q: 13   CSICLEIFVE-PVSTPCGHSFCKACLQGY----WNHSKKFLCPMCK 53
           **********.***************888....78999*******6 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MSFNSLSEEQ FSCSICLEIF VEPVSTPCGH SFCKACLQGY WNHSKKFLCP MCKKSYSRKP 60
EMSVNRVLAE ISSQFQGLTV AKGTASQGSR WNLSSDTGQS SSPVKDTGEF AQPGDVPCDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGGTCCA CTGCAAGTTT CAGGAAGAGT TCAACACCTG AGCTGTGTGA TTCACAGCAA 60
AGTACGTGAG GTGAAGCACC GCACCGCTCG AGGTCAAAAA GGAAAACATG AGTGAGTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-028724	Danio rerio	68.64	0.00e+00	734.00
IUUC-Gmo-039069	Gadus morhua	69.74	0.00e+00	743.00
IUUC-Gac-041329	Gasterosteus aculeatus	80.19	0.00e+00	879.00
IUUC-Loc-052120	Lepisosteus oculatus	55.98	0.00e+00	677.00
IUUC-Ola-087413	Oryzias latipes	73.83	2.00e-178	618.00
IUUC-Pfo-096808	Poecilia formosa	78.17	0.00e+00	900.00
IUUC-Tru-117909	Takifugu rubripes	81.62	0.00e+00	973.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence