iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131595

Ensembl Protein ID

VIT_14s0030g02310.t01

UniProt Accession

D7TUH9; D7TUH9_VITVI

Genbank Protein ID

CBI34154.3

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

FN596249

Gene Name

VIT_14s0030g02310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_14s0030g02310	VIT_14s0030g02310.t01	VIT_14s0030g02310.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.80e-19	70.3	104	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
            +kvs++g+++++++dl+++ ++ +Llka++  ++          ++++se+a++YeD+dGD++ l++D+++++++s      s++rl
   Q: 104  YLKVSMDGAPYLRKIDLKVYKGYPELLKALEEmFKfsvgqysereGYNGSEYAPTYEDKDGDWM-LVGDVPWNMFIS------SCKRL 184
           58******************************6448899999999*******************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 185  RIMK 188
           ***8 PP

Organism

Vitis vinifera

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MENKVIYEKD LNLEATELRL GLPGTKKPEK QAPPSLKTSN KRALPDMNEE SGSGNNSSVS 60
DDGKSHRETA PAPKAQVVGW PPVRSYRKSC FQPKKTEAEE GRTYLKVSMD GAPYLRKIDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAAGAATT CGCCAGATTG TCATCGGAAA TATTAGCTCA GTTTTCATCA AAAGATTTGG 60
TTGTTAGTGG AAGAGATATC GGTGTTGATT GATCAACTGT TTCGGTTCTT GCTCAATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

vvi:100262403

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	49.30	3.00e-40	157.00
IUUC-Bgr-012301	Blumeria graminis	39.02	7.80e-01	27.30
IUUC-Bdi-014020	Brachypodium distachyon	53.11	8.00e-43	165.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	2.40e-01	27.30
IUUC-Hvu-047853	Hordeum vulgare	51.17	2.00e-44	171.00
IUUC-Lpe-051475	Leersia perrieri	47.06	6.00e-39	152.00
IUUC-Mtr-058557	Medicago truncatula	65.96	1.00e-64	237.00
IUUC-Oba-075141	Oryza barthii	53.37	4.00e-49	186.00
IUUC-Obr-076144	Oryza brachyantha	46.36	2.00e-41	160.00
IUUC-Ogl-077720	Oryza glaberrima	46.93	1.00e-41	161.00
IUUC-Ogu-078093	Oryza glumaepatula	53.37	2.00e-47	180.00
IUUC-Oin-079780	Oryza indica	52.88	1.00e-46	178.00
IUUC-Oni-083078	Oryza nivara	52.88	1.00e-46	178.00
IUUC-Opu-083449	Oryza punctata	46.52	6.00e-38	150.00
IUUC-Oru-084991	Oryza rufipogon	52.88	1.00e-46	178.00
IUUC-Osa-085321	Oryza sativa	52.88	1.00e-46	178.00
IUUC-Pop-099628	Populus trichocarpa	74.63	3.00e-79	286.00
IUUC-Ppe-101322	Prunus persica	67.82	7.00e-73	265.00
IUUC-Ptt-103794	Puccinia triticina	45.83	9.80e-02	31.60
IUUC-Sit-109841	Setaria italica	53.08	2.00e-49	187.00
IUUC-Sly-110939	Solanum lycopersicum	66.33	9.00e-67	244.00
IUUC-Stu-112670	Solanum tuberosum	66.16	5.00e-68	249.00
IUUC-Sbi-114105	Sorghum bicolor	52.58	1.00e-43	168.00
IUUC-Tni-120011	Tetraodon nigroviridis	37.21	3.80e-01	28.50
IUUC-Tca-121147	Theobroma cacao	77.95	9.00e-82	294.00
IUUC-Tae-123807	Triticum aestivum	51.17	9.00e-46	175.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence