iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042880

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000844

Gene Name

LOC100794963; GLYMA_11G051700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G05524	GLYMA11G05524.1	GLYMA11G05524.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-51	171.9	484	522
UBD/Beta-Prp	1.80e-67	229.2	366	555

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+++af ++  +++sGs D ++ +W+l++g+ +k
   Q: 484  GHRDRVYSVAFsPNgEYIASGSPDRSMLIWSLKEGKIVK 522
           8***********777*******************99887 PP

UBD/Beta-Prp

   S: 25   latgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp........sg.dkl 109
           +at+s+d +i v ++ +   +r++ gh++ev+++k++p+g++l+++s+D+t+k+w++++ k++h +++h+++++++++sp        ++  +l
   Q: 366  FATSSTDTKIHVCKIGENLPIRTFVGHQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDKYLHEFREHSKEIYTIRWSPtgpgtnnpNKnLVL 459
           5555555555555555555566666666666666666666666666666666666666666666666666666665555555554443222345 PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt 203
           +s+s d+t+++wd+e g+ l+  l+gh++ v +v+++p+g +++sGs Dr + +W+lk gk+++t tg  ++ +  + ++++g  ++++  ++t
   Q: 460  ASASFDSTVKLWDVELGKLLY-SLNGHRDRVYSVAFSPNGEYIASGSPDRSMLIWSLKEGKIVKTYTG--DGGIFEVCWNKEGDKIAACFANNT 550
           555556666666666666665.5666666666666666556666666666666666666666666655..555555556666655555555555 PP
   S: 204  vklwd 208
           v + d
   Q: 551  VCVLD 555
           55544 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTSVTSVELN LLVFRYFQES GFTHAAFAFG NEASINKSPI DGKLIPPGAL ITLVQKGLQY 60
LEMEANLSNC DADLDEDFSF LQPLDLITKD VHELRKMVNE RRKILQKNRN KESEKENEGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATGTAAAT ACATTCGATA ATTGCGAAAA TTAAGAATTA CGAAGTACCC ATAAACGAAG 60
GGAACAAATC GACTTGTGCA CTGCTGTGCA GAGACAGAGA GAGAGAGTGG TGCTTTGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

gmx:100794963

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014315	Brachypodium distachyon	65.02	0.00e+00	688.00
IUUC-Cfa-020929	Canis familiaris	49.19	4.00e-152	531.00
IUUC-Gac-041770	Gasterosteus aculeatus	49.73	8.00e-152	530.00
IUUC-Stu-112786	Solanum tuberosum	60.61	0.00e+00	653.00
IUUC-Tni-120861	Tetraodon nigroviridis	48.21	4.00e-146	511.00
IUUC-Tbe-127665	Tupaia belangeri	42.19	2.00e-120	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence