iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011894

Ensembl Protein ID

ENSAMXP00000006289.1

UniProt Accession

W5KFC8; W5KFC8_ASTMX

Genbank Protein ID

ENSAMXP00000006289

Protein Name

Coronin

Genbank Nucleotide ID

APWO01081634

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000006120.1	ENSAMXT00000006289.1	ENSAMXP00000006289.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-18	64.3	80	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH++ v ++++   ++++++s+s D ++++W++
   Q: 80   GHQGNVLDIKWnpfHENIIASCSEDSSVRIWEI 112
           8**********997669**************96 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSWRPTYRSS KFRNVYGKVA NREHCFEGIP ITKNVHDNHF CAVNSKFLAI VTESAGGGSF 60
IVIPVAQAGR IDPHHPKVCG HQGNVLDIKW NPFHENIIAS CSEDSSVRIW EIPDSGLRRN 120

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Nucleotide Sequence
(Fasta)

AGAGCAGCAG CAGATCCCGC CCCATTCCTC TCTCACCCAC CCACTCTCTC TCTCTCTCTC 60
TCTCTCTCTC TCTCTGCATC TACTGCTCAC TCTGCTGCTC AAGAGGCTGT AGAGCACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027339--CORO2B
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane
GO:0030036--P:actin cytoskeleton organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003786	Anas platyrhynchos	70.08	0.00e+00	744.00
IUUC-Lch-049567	Latimeria chalumnae	72.64	0.00e+00	769.00
IUUC-Mga-059825	Meleagris gallopavo	71.48	0.00e+00	750.00
IUUC-Pma-094375	Petromyzon marinus	73.68	6.00e-135	473.00
IUUC-Ssc-115774	Sus scrofa	72.51	0.00e+00	759.00
IUUC-Tru-117702	Takifugu rubripes	69.76	0.00e+00	751.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence