iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117564

UUCD1 version

UUC-TaR-00256

Ensembl Protein ID

ENSTRUP00000012986.1

UniProt Accession

H2SKQ2; H2SKQ2_TAKRU

Protein Name

Uncharacterized protein

Gene Name

trim47; LOC101076974

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000005410.1	ENSTRUT00000013046.1	ENSTRUP00000012985.1
ENSTRUG00000005410.1	ENSTRUT00000013047.1	ENSTRUP00000012986.1
ENSTRUG00000005410.1	ENSTRUT00000013048.1	ENSTRUP00000012987.1
ENSTRUG00000005410.1	ENSTRUT00000013049.1	ENSTRUP00000012988.1
ENSTRUG00000005410.1	ENSTRUT00000013050.1	ENSTRUP00000012989.1
ENSTRUG00000005410.1	ENSTRUT00000013051.1	ENSTRUP00000012990.1
ENSTRUG00000005410.1	ENSTRUT00000013052.1	ENSTRUP00000012991.1
ENSTRUG00000005410.1	ENSTRUT00000013053.1	ENSTRUP00000012992.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-08	35.0	30	73
E3 activity/RING/U-box	5.30e-08	34.0	26	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl+ fkd p++l CgH f++ C+  +w    n      +CP Cr
   Q: 30   CAICLDYFKD-PVILKCGHSFCRFCIsLHW--DENGDDYGYQCPHCR 73
           **********.999****************..5556667778****8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqa 67
           +e+ C+I l+ ++dPv+l++G+++ r +I  + +++g     +cP +r+ + +++ + n+ +++li +
   Q: 26   KELTCAICLDYFKDPVILKCGHSFCRFCISLHWDENGDdygyQCPHCRTVFNKKSYTKNYLVQNLIAK 93
           7899*****************************999988999***********************976 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

VAEASLCVSV VGKMAAGGSS REELRKELTC AICLDYFKDP VILKCGHSFC RFCISLHWDE 60
NGDDYGYQCP HCRTVFNKKS YTKNYLVQNL IAKLDDLDCL DSSPQQAKAV KVDGKCEQHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTCGT GGGCCGGGCT TGTTCCGCCT TCACTTCCTG TGGCGGAAGC GTCGCTCTGC 60
GTGTCGGTTG TGGGTAAAAT GGCGGCCGGC GGATCCTCCC GTGAGGAGCT GAGGAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011001	Astyanax mexicanus	60.30	2.00e-86	311.00
IUUC-Cel-018356	Caenorhabditis elegans	47.92	1.00e-10	59.30
IUUC-Dre-028391	Danio rerio	62.47	4.00e-167	580.00
IUUC-Gmo-039179	Gadus morhua	64.83	2.00e-171	595.00
IUUC-Gac-042093	Gasterosteus aculeatus	70.29	0.00e+00	636.00
IUUC-Ont-072162	Oreochromis niloticus	73.42	0.00e+00	652.00
IUUC-Pfo-097051	Poecilia formosa	70.76	0.00e+00	659.00
IUUC-Pop-099737	Populus trichocarpa	37.76	7.00e-11	63.20
IUUC-Tni-120905	Tetraodon nigroviridis	82.54	0.00e+00	745.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence